Miyakogusa Predicted Gene

Lj2g3v1599690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1599690.1 Non Chatacterized Hit- tr|I3SLN7|I3SLN7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
no description,Ribosomal protein L5 domain; RIBOSOMAL_L5,Ribosomal
protein L5, conserved s,CUFF.37550.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g47200.1                                                       402   e-112
Glyma09g39130.1                                                       388   e-108

>Glyma18g47200.1 
          Length = 275

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/247 (77%), Positives = 218/247 (88%), Gaps = 1/247 (0%)

Query: 21  FRPSPPQFSPHGIRHGNAVVSVKATAAGAVLVEKSEAETVFRLKRTYTEKVIPKLVEEFS 80
           F+ S     PHG RHGNAVVSVKA+A+G VLVEKSEAE   RLK  YTEK+IP L+EEFS
Sbjct: 30  FQFSSSSLFPHGNRHGNAVVSVKASASGVVLVEKSEAEKANRLKTAYTEKIIPLLMEEFS 89

Query: 81  YTNIHQVPKVKKIVVNCGIGEAAQNAKGLDAAVNDLALITGQRPVKTRARTSVATFKIRE 140
           YTN HQVPK++KIVVNCGIG+AAQNAKGLDAA++DLALITGQRP+KTRAR S+ATFKIRE
Sbjct: 90  YTNKHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATFKIRE 149

Query: 141 GQPLGIAVTLRGKVMYSFLDRLVNLGFPRTRDFQGVNTSSFDGHGNFNIGIKDQGVFPEI 200
           GQPLGIAVTLRG +MYSFLDR++NLG PRTRDFQGVN +SFDGHGN++IGIKDQGVFPEI
Sbjct: 150 GQPLGIAVTLRGNMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEI 209

Query: 201 RFDVVGKPRGMDVCIETTAETDKEAQRLLALLGMPFREGGGSSATALPKKKLKSHHFDPK 260
           R DVVGKPRGMD+CI TTA TD+EAQ+LLAL+GMPFREG G  AT + KKKLKSHHFD K
Sbjct: 210 RADVVGKPRGMDICIVTTANTDQEAQKLLALMGMPFREGSG-PATTIRKKKLKSHHFDAK 268

Query: 261 AKGKVRK 267
           +KG+ R+
Sbjct: 269 SKGRGRR 275


>Glyma09g39130.1 
          Length = 285

 Score =  388 bits (997), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 184/234 (78%), Positives = 211/234 (90%), Gaps = 1/234 (0%)

Query: 34  RHGNAVVSVKATAAGAVLVEKSEAETVFRLKRTYTEKVIPKLVEEFSYTNIHQVPKVKKI 93
           +HGNA+VSVKA+ +G VLVEKSEAE   RLK  YTEK+IP L+EEFSYTN HQVPK++KI
Sbjct: 53  KHGNALVSVKASVSGVVLVEKSEAEKANRLKTAYTEKIIPLLMEEFSYTNKHQVPKIEKI 112

Query: 94  VVNCGIGEAAQNAKGLDAAVNDLALITGQRPVKTRARTSVATFKIREGQPLGIAVTLRGK 153
           VVNCGIG+AAQNAKGLDAA++DLALITGQRP+KTRAR S+ATFKIREGQPLGI+VTLRG 
Sbjct: 113 VVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATFKIREGQPLGISVTLRGN 172

Query: 154 VMYSFLDRLVNLGFPRTRDFQGVNTSSFDGHGNFNIGIKDQGVFPEIRFDVVGKPRGMDV 213
           +MYSFLDR+VNLG PRTRDFQGVN +SFDGHGN++IGIKDQGVFPEIR DVVGKPRGMD+
Sbjct: 173 MMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVGKPRGMDI 232

Query: 214 CIETTAETDKEAQRLLALLGMPFREGGGSSATALPKKKLKSHHFDPKAKGKVRK 267
           CI TTA+TD+EA +LLAL+GMPFREG G  AT + KKKLKSHHFD K+KG+ RK
Sbjct: 233 CIATTAKTDQEAHKLLALMGMPFREGSG-PATTIRKKKLKSHHFDAKSKGRGRK 285