Miyakogusa Predicted Gene
- Lj2g3v1574280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1574280.1 Non Chatacterized Hit- tr|I1GX86|I1GX86_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,26.96,4e-18,SUBFAMILY NOT NAMED,NULL; ZINC FINGER CW-TYPE
COILED-COIL DOMAIN PROTEIN 3.,NULL; ATPase domain of H,CUFF.37606.1
(713 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g36090.1 328 1e-89
Glyma17g09550.1 103 5e-22
Glyma04g35870.1 103 7e-22
Glyma02g05800.1 99 1e-20
Glyma05g38310.1 99 2e-20
Glyma16g24450.1 98 3e-20
Glyma08g01340.1 95 2e-19
>Glyma01g36090.1
Length = 222
Score = 328 bits (842), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/228 (71%), Positives = 177/228 (77%), Gaps = 13/228 (5%)
Query: 363 YLIGEKTALFSGGSGTQIYIWNLDRWGSEYCLQWQNGLKGGSSFHQGDILIXXXXXXXXP 422
YLIGEK ALF GG+GTQIYIWNLD WGS+YCL+W +GLKGGSSFHQGDILI P
Sbjct: 1 YLIGEKAALFGGGTGTQIYIWNLDEWGSKYCLEWHDGLKGGSSFHQGDILISSKRIRSRP 60
Query: 423 GQINQKVPLDYSLRAYLEVIFLVPRMKMSVQGTLVKSRPLANFLTKTVIETGIILGRPVE 482
GQI+QKVPLDYSLRAYLEVIFLVPRMK+SVQGTLVKSRPL NFLT+ VIET ILGRPVE
Sbjct: 61 GQISQKVPLDYSLRAYLEVIFLVPRMKISVQGTLVKSRPLGNFLTQIVIETDNILGRPVE 120
Query: 483 LTLGFSQLEWEQASCGIFLYWHGRLIEAYKRVGGMIHSAXXXXXXXXXXXXSNLMDEQDG 542
L LGFSQLEWEQA+CG+FLYWHGRLIEAYKRVGGMIH+A +NLM
Sbjct: 121 LILGFSQLEWEQANCGMFLYWHGRLIEAYKRVGGMIHNADVGRGVIGVVNVTNLM----- 175
Query: 543 RVWVHNNKQGFQDCQSYASLEEWLGRRADQYWDKNFDSLELDKGNCVY 590
QGFQD Q YA LE+WLGR+AD+YWD NFDSL L K C +
Sbjct: 176 --------QGFQDSQPYACLEQWLGRKADKYWDDNFDSLTLVKLFCKF 215
>Glyma17g09550.1
Length = 466
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 195/438 (44%), Gaps = 55/438 (12%)
Query: 186 NLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRD-AKATKIDISVDMIKLEKSGKDVPML 244
N + V P +L + +H WVFG IAEL+DN+ D + + VD I K G P L
Sbjct: 25 NYLHVHPFFLHSNATSHK-WVFGAIAELIDNAVDEIQNGATFVFVDKILNPKDGS--PAL 81
Query: 245 SVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN- 303
+ DDG GMD + + + +SFG K IG++G GFKTG+MRLG DV+V ++ N
Sbjct: 82 LIRDDGGGMDPEAMRQCMSFG---FSNKSKIAIGQYGNGFKTGSMRLGADVIVFSRHQNN 138
Query: 304 ---SRSIAFLSQS--LNEGKDNIEIPIVSYRRQGQRMEVDTNVQSEALSKSNLKAIKEYS 358
++SI LS + + +D + +P+V+Y+ ++ E +SNL + +S
Sbjct: 139 MKLTQSIGLLSYTYLMQTQQDRVVVPMVNYKFDTSTGYLERLNDGEHF-RSNLSILLHWS 197
Query: 359 PFDKYLIGEKTA-LFS--GGSGTQIYIWNLDRWGSEYCLQWQNGLKGGSSFHQGDIL--- 412
P YL E+ LF G GT+I I+NL + + L+ GDI
Sbjct: 198 P---YLSEEELLKLFDDIGNHGTKIIIFNL-WFNDDGNLELDFNSDPEDIHIVGDIKKID 253
Query: 413 IXXXXXXXXPGQINQKVPLDYSLRAYLEVIFL-VPR-MKMSVQGTLVKSRPLANFLTKTV 470
G I + YSL AYL +++L +P +M ++G +VK +A+ L
Sbjct: 254 THSASKIVNEGHIANR--FHYSLHAYLSILYLRIPESFRMILRGQVVKLHNIADDLKY-- 309
Query: 471 IETGIILGRP---------VELTLGFSQLEWEQASCGIFLYWHGRLIEAYKRVGGMIHSA 521
T +L RP T+GF + + G +Y RLI + +V ++
Sbjct: 310 --TEFVLYRPQCGSSKEGVSVTTIGFVKEAPKGNIHGFNVYHKNRLILPFWKV---VNYT 364
Query: 522 XXXXXXXXXXXXSNLMDEQDGRVWVHNNKQGFQDCQSYASLEEWLGRRADQYWDKNFDSL 581
++ ++ +NKQ F+ + LE L + +YWD + +
Sbjct: 365 NTRGRGVVGILQADYLEPT-------HNKQDFERTSLFQKLELRLKQMTWEYWDYHCHLI 417
Query: 582 ELDKGNCVYKPDCEWVQC 599
GN + K + C
Sbjct: 418 ----GNHIIKKPVALLDC 431
>Glyma04g35870.1
Length = 688
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 181/415 (43%), Gaps = 48/415 (11%)
Query: 185 KNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDA-KATKIDISVDMIKLEKSGKDVPM 243
KN + V P +L + +H W FG IAEL+DN+ D + + VD + G P
Sbjct: 126 KNYLHVHPMFLHSNATSHK-WAFGAIAELLDNAVDEIQNGATFVIVDKTSNPRDGN--PA 182
Query: 244 LSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN 303
L + DDG GMD D + + +SFG DK + IGR+G GFKT +MRLG DV+V + N
Sbjct: 183 LLIQDDGGGMDPDAMRRCMSFGFS--DKKSQFAIGRYGNGFKTSSMRLGADVIVFSCHLN 240
Query: 304 SR----SIAFLSQS--LNEGKDNIEIPIVSYRRQGQRMEVDTNVQSEALSK------SNL 351
+R SI LS + + D I +P+V+Y E DT+ S + SNL
Sbjct: 241 NRILTQSIGLLSYTYLIKTQLDRIVVPMVNY-------EFDTSTGSLKILNGNEHFVSNL 293
Query: 352 KAIKEYSPFDKYLIGEKTALFSGGSGTQIYIWNLDRW-GSEYCLQWQNGLKGGSSFHQGD 410
+ +SP+ K G GT++ I+NL W + L+ GD
Sbjct: 294 SLLLRWSPYSSEADLLKQFDDIGSHGTKVIIYNL--WCNDDANLELDFDTDPTDIRIAGD 351
Query: 411 I-LIXXXXXXXXPGQINQKVPLDYSLRAYLEVIFL-VPR-MKMSVQGTLVKSRPLAN--- 464
+ I + + L YSL Y+ +++L +P +M ++G +VK +A+
Sbjct: 352 VKQIDTLKAWKSVNEEHIANRLRYSLHVYMSILYLKIPESFQMILRGQVVKPHNIADDLK 411
Query: 465 ---FLTKTVIETGIILGRPVEL-TLGFSQLEWEQASCGIFLYWHGRLIEAYKRVGGMIHS 520
F+ + G + G + + T+GF + + G +Y RLI + +V + S
Sbjct: 412 FPQFVKYAPVIGGSVKGTALTVTTIGFLKEAPQVNIHGFNVYHKNRLILPFWQVVSYLDS 471
Query: 521 AXXXXXXXXXXXXSNLMDEQDGRVWVHNNKQGFQDCQSYASLEEWLGRRADQYWD 575
Q + +NKQ F+ + LE L +YWD
Sbjct: 472 RGRGVVGIL----------QADFIEPTHNKQDFERTSLFQKLEGRLKEMTWEYWD 516
>Glyma02g05800.1
Length = 594
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 189 RVDPSYLKTLGQAHSGWVFGGIAELVDNSRD-----AKATKIDISVDMIKLEKSGKDVPM 243
RV P +L + +H W FG IAELVDN+ D A KID KL+ + P
Sbjct: 99 RVHPKFLHSNATSHK-WAFGAIAELVDNAVDENQNGATFVKID------KLDVKKDNSPA 151
Query: 244 LSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN 303
L +DDG GM+ + + K +S G+ K K IG++G GFKT MRLG DV+V ++ +
Sbjct: 152 LCFLDDGGGMNPNAIRKCMSLGYSS--KKSKTTIGQYGNGFKTSTMRLGADVIVFSRAMH 209
Query: 304 S----RSIAFLSQSL--NEGKDNIEIPIVSYRRQGQRMEVDTNVQSEALSKSNLKAIKEY 357
S +S+ LS + G+D++ +P++ + G E S+ +NLK I ++
Sbjct: 210 SGRATQSVGLLSYTFLRRTGQDDVVVPMIDFDISGHWAE-PIIYSSQHEWSANLKTILDW 268
Query: 358 SPFDKYLIGEKTALFS--GGSGTQIYIWNL 385
SPF E F G GT++ I+NL
Sbjct: 269 SPFTSK--EELMLQFDDIGSHGTKVVIYNL 296
>Glyma05g38310.1
Length = 780
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 193/420 (45%), Gaps = 52/420 (12%)
Query: 188 IRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKID-ISVDMIKLEKSGKDVPMLSV 246
+RV P +L + +H W G +AEL+DNS D + ++VDM+ +K G ML +
Sbjct: 157 VRVHPKFLHSNATSHK-WALGALAELLDNSLDEVCSGATYVNVDMLTNKKDG--TRMLLI 213
Query: 247 IDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQ------ 300
D+G GMD +++ + +S G+ K + IG++G GFKT MRLG DV+V ++
Sbjct: 214 EDNGGGMDPEKMRQCMSLGYSVKSKM-ANTIGQYGNGFKTSTMRLGADVIVFSRYPGKDM 272
Query: 301 TANSRSIAFLSQSL--NEGKDNIEIPIVSYRRQGQRMEVDTNVQSEALSKSNLKAIKEYS 358
++S+SI LS + + GK++I +P++ Y R+GQ + K N++ I ++S
Sbjct: 273 KSSSQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQEWNKIIRTSLDDWDK-NVETIVQWS 331
Query: 359 PFDKYLIGEKTALFSGGSGTQIYIWNLDRWGSEYCLQWQNGLKGGSSFHQGDILIXXXXX 418
PF + GT++ I+NL W + Q Q L H DI I
Sbjct: 332 PFSNEADLLRQFNLVKDHGTRVIIYNL--WEDD---QGQLELDFDEDPH--DIQIRGVNR 384
Query: 419 XXXPGQINQKVP-----LDY--SLRAYLEVIFLV--PRMKMSVQGTLVKSRPLAN--FLT 467
Q+ ++ P L Y SLR+Y +++L P ++ ++G + + N ++
Sbjct: 385 DEKNIQMAKEFPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGKDILHHNIVNDMMMS 444
Query: 468 KTVI---ETGIILGRPVE------LTLGFSQLEWEQASCGIFLYWH-GRLIEAYKRVGGM 517
+ V + G+ P + +T+GF + F +H RLI+ + R+
Sbjct: 445 QEVTYRPQAGVDGLLPKDSNMVAVVTIGFVKDAVHHIDVSGFNVYHKNRLIKPFWRI--- 501
Query: 518 IHSAXXXXXXXXXXXXSNLMDEQDGRVWVHNNKQGFQDCQSYASLEEWLGRRADQYWDKN 577
+ A +N ++ ++KQGF+ + LE L + +YW N
Sbjct: 502 WNPAGSGGRGVIGVLEANFVEPA-------HDKQGFERTLVLSRLESKLIQMQKKYWSTN 554
>Glyma16g24450.1
Length = 235
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 189 RVDPSYLKTLGQAHSGWVFGGIAELVDNSRD-----AKATKIDISVDMIKLEKSGKDVPM 243
RV P +L + +H W FG IAELVDN+ D A KID K + + P
Sbjct: 27 RVHPKFLHSNATSHK-WAFGAIAELVDNAVDEIQNGATFVKID------KFDVKKDNSPA 79
Query: 244 LSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN 303
L +DDG GM+ + + K +S G+ K K IG++G GFKT MRLG DV+V ++ +
Sbjct: 80 LCFLDDGGGMNPNAIRKCMSLGYSS--KKSKTTIGQYGNGFKTSTMRLGADVIVFSRAMH 137
Query: 304 S----RSIAFLSQSL--NEGKDNIEIPIVSYRRQGQRMEVDTNVQSEALSKSNLKAIKEY 357
S +S+ LS + G+D++ +P++ + G E + S +NLK I ++
Sbjct: 138 SGRATQSVGLLSYTFLRRTGQDDVVVPMIDFDISGHWAEPIIYSSQDEWS-ANLKTILDW 196
Query: 358 SPFDKYLIGEKTALFS--GGSGTQIYIWNL 385
SPF E F G GT++ I+NL
Sbjct: 197 SPFTSK--EELMLQFDDIGSHGTKVVIYNL 224
>Glyma08g01340.1
Length = 820
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 187/422 (44%), Gaps = 56/422 (13%)
Query: 188 IRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKID-ISVDMIKLEKSGKDVPMLSV 246
+RV P +L + +H W G AEL+DNS D ++VDM+ +K G ML V
Sbjct: 151 VRVHPKFLHSNATSHK-WALGAFAELLDNSLDEVCNGATYVNVDMLINKKDG--TRMLLV 207
Query: 247 IDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQ------ 300
D+G GMD +++ + +S G+ K + IG++G GFKT MRLG DV+V ++
Sbjct: 208 EDNGGGMDPEKMRQCMSLGYSMKSKM-ANTIGQYGNGFKTSTMRLGADVIVFSRYPGKDG 266
Query: 301 TANSRSIAFLSQSL--NEGKDNIEIPIVSYRRQGQRMEVDTNVQSEALSKSNLKAIKEYS 358
++++SI LS + + GK++I +P++ Y R+GQ + +K N++ I ++S
Sbjct: 267 KSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQEWNKIIRTSLDDWNK-NVETIVQWS 325
Query: 359 PFDKYLIGEKTALFSGGSGTQIYIWNLDRWGSEYCLQWQNGLKGGSSFHQGDILIXXXXX 418
PF GT++ I+NL W + Q Q L H DI I
Sbjct: 326 PFSNEADLLLQFNLVKDHGTRVIIYNL--WEDD---QGQLELDFDEDPH--DIQIRGVNR 378
Query: 419 XXXPGQINQKVP-----LDY--SLRAYLEVIFLVPRMKMSVQGTLVKSRPLANFLTKTVI 471
Q++++ P L Y SLR+Y +++L R+ + L L + + ++
Sbjct: 379 DEKNIQMSKEFPNSRHFLTYRHSLRSYTSILYL--RLPSGFRIILRGKDILHHNIVNDMM 436
Query: 472 ETGIILGRP---------------VELTLGFSQLEWEQASCGIFLYWH-GRLIEAYKRVG 515
+ + RP +T+GF + F +H RLI+ + R+
Sbjct: 437 MSQEVTYRPQAGVDGLLPKDSNMVAVVTIGFVKDAVHHVDVSGFNVYHKNRLIKPFWRI- 495
Query: 516 GMIHSAXXXXXXXXXXXXSNLMDEQDGRVWVHNNKQGFQDCQSYASLEEWLGRRADQYWD 575
+ A +N ++ ++KQGF+ + LE L + +YW
Sbjct: 496 --WNPAGSGGRGVIGVLEANFVEPA-------HDKQGFERTLVLSRLESKLIQMQKKYWS 546
Query: 576 KN 577
N
Sbjct: 547 TN 548