Miyakogusa Predicted Gene

Lj2g3v1549750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1549750.1 tr|Q9LVV0|Q9LVV0_ARATH Emb|CAB82814.1
OS=Arabidopsis thaliana GN=At5g53020 PE=4
SV=1,36.51,1e-18,coiled-coil,NULL; seg,NULL; TRANSCRIPTION FACTOR
X1-LIKE,NULL; RIBONUCLEASE P PROTEIN SUBUNIT P38-RE,CUFF.37394.1
         (417 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g14680.1                                                       488   e-138
Glyma09g34790.1                                                       449   e-126
Glyma04g41340.1                                                        94   3e-19
Glyma06g13510.1                                                        93   5e-19

>Glyma04g14680.1 
          Length = 418

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 268/412 (65%), Positives = 296/412 (71%), Gaps = 19/412 (4%)

Query: 16  LLRSYIGLSFSVFLALLPTN----LRTKARDLT----RAEEELSQMRSRRREDSKANARV 67
           L  SYIG SFS+FLA+L  N    L+ K R L+     A EEL QM+SRR+EDSKANARV
Sbjct: 16  LFCSYIGASFSMFLAMLANNSVPALQGKVRSLSLRAAEAAEELRQMKSRRQEDSKANARV 75

Query: 68  AEIFASHRNAWRDEEKRLLRRIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEMIEFM 127
            EIFASHRNAW+ EEKRLL++ID                              DEMI FM
Sbjct: 76  VEIFASHRNAWQAEEKRLLQQIDAAAEEIACLRGRVAELEDAAAHGERDVAERDEMIGFM 135

Query: 128 SRRIHEEGLGGCQSRDHYGGKKNQEWFHNXXXXXXVGTTRNVEEEGVEVIYEHKXXXXXX 187
           SRRI EEGLGG + R+ YG KK++EWF           T   EEE  +VIYE +      
Sbjct: 136 SRRIEEEGLGG-RERERYG-KKSEEWFQKVEDMVGSTATSLEEEEEADVIYEEQHSQH-- 191

Query: 188 XXXXLVDNNGFDAEFMASASKFWAEKASLWQDVQHESLESMYSAKQFVARRESPWKVDGD 247
                 +NNGFD++FMASASKFWAEKASL QDVQ+ESLESMY+ K FVARRESPWKVDGD
Sbjct: 192 ----FGNNNGFDSKFMASASKFWAEKASLCQDVQYESLESMYNTKHFVARRESPWKVDGD 247

Query: 248 SAGVSSXXXXXXXXXXXXXXFAKSDLSKVAPLIKKQAKRYQALSEKIDDLCRRIASDPSE 307
           SAGVSS                K+D SKV  LIKKQAKRYQA+SEKIDDLCRRIA+DP E
Sbjct: 248 SAGVSSKLKLLEQDLLNLEKIGKNDPSKVPSLIKKQAKRYQAISEKIDDLCRRIANDPCE 307

Query: 308 PSLSSEFRTQTQTEFLLEAFRLQQGASETGQKLMALQTEIGKS--LYRDELKSEATPTTR 365
           PSLS+EFRTQTQTEFLLEAFRLQ GASETGQKLMALQTEIGKS  +YRDEL SE T TTR
Sbjct: 308 PSLSTEFRTQTQTEFLLEAFRLQLGASETGQKLMALQTEIGKSHYIYRDEL-SETTLTTR 366

Query: 366 RSLDSIRNNFKDLQRNLEIWLARIIGDLEGILARDGASRVREYYISRYPFVQ 417
           RS DSIRNNFK++QRNLEIWLARIIGDLEGILAR+GASRVREYYISRYPFVQ
Sbjct: 367 RSFDSIRNNFKEIQRNLEIWLARIIGDLEGILAREGASRVREYYISRYPFVQ 418


>Glyma09g34790.1 
          Length = 405

 Score =  449 bits (1156), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/412 (63%), Positives = 289/412 (70%), Gaps = 35/412 (8%)

Query: 16  LLRSYIGLSFSVFLALLPTN----LRTKARDLT----RAEEELSQMRSRRREDSKANARV 67
           L RSYIGLSFS+FLA+L  N    L+ K R L+     A EEL QM+SRR+EDSKANARV
Sbjct: 19  LFRSYIGLSFSMFLAMLANNSVPALQGKVRSLSLRAADAAEELRQMKSRRQEDSKANARV 78

Query: 68  AEIFASHRNAWRDEEKRLLRRIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEMIEFM 127
            EIFASHRNA   E  RL  R+                               DEMI FM
Sbjct: 79  VEIFASHRNA---EIARLRGRV--------------AELEDAAARAERDVAERDEMIGFM 121

Query: 128 SRRIHEEGLGGCQSRDHYG--GKKNQEWFHNXXXXXXVGTTRNVEEEGVEVIYEHKXXXX 185
           SRRI +EGLGG +        GKK++EWF          T R++EEE   +  E      
Sbjct: 122 SRRIEDEGLGGREREREREVYGKKSEEWFQKEEDEMVGSTARSLEEEVEVIYEEQHSQH- 180

Query: 186 XXXXXXLVDNNGFDAEFMASASKFWAEKASLWQDVQHESLESMYSAKQFVARRESPWKVD 245
                   +NNGFD+EFMASASKFWAEKASLWQDVQ+ESLESMY+ K FVARRESPWKVD
Sbjct: 181 ------FGNNNGFDSEFMASASKFWAEKASLWQDVQYESLESMYNTKHFVARRESPWKVD 234

Query: 246 GDSAGVSSXXXXXXXXXXXXXXFAKSDLSKVAPLIKKQAKRYQALSEKIDDLCRRIASDP 305
           GDSAGVSS                K+  SKV+ LIKKQAKRYQA+SEKIDDLCRRIA++P
Sbjct: 235 GDSAGVSSKLKLLEQDLLNLEKIGKNHPSKVSSLIKKQAKRYQAISEKIDDLCRRIANEP 294

Query: 306 SEPSLSSEFRTQTQTEFLLEAFRLQQGASETGQKLMALQTEIGKSLYRDELKSEATPTTR 365
            EPSLS+EFRTQTQTEFLLEAFRLQQGASETGQKLMALQTEIGKS YRDEL SE TP TR
Sbjct: 295 CEPSLSTEFRTQTQTEFLLEAFRLQQGASETGQKLMALQTEIGKSHYRDEL-SETTPITR 353

Query: 366 RSLDSIRNNFKDLQRNLEIWLARIIGDLEGILARDGASRVREYYISRYPFVQ 417
           RSLDSIRNNFK++QRNLEIWLARIIGDLEGILAR+GASRVREYYISRYPFVQ
Sbjct: 354 RSLDSIRNNFKEIQRNLEIWLARIIGDLEGILAREGASRVREYYISRYPFVQ 405


>Glyma04g41340.1 
          Length = 800

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 8/139 (5%)

Query: 276 VAPLIKKQAKRYQALSEKIDDLCRRI------ASDPSEPSLSSEFRTQTQTEFLLEAFRL 329
           +  L+ KQ  RYQ+L EK DDLC+R+      A+     +  ++ +T T   FL E F+L
Sbjct: 661 LTTLLNKQVGRYQSLQEKTDDLCKRMHENDLYANRGDVSAARAKEKTSTLEHFLEETFQL 720

Query: 330 QQGASETGQKLMALQTEI--GKSLYRDELKSEATPTTRRSLDSIRNNFKDLQRNLEIWLA 387
           Q+    TGQKLM +Q++I  G     +E+   +     R  DSIRN F ++QR LE+  A
Sbjct: 721 QRYIVATGQKLMEIQSKILSGFVGVAEEMGKSSGIDMNRFADSIRNLFHEVQRGLEVRTA 780

Query: 388 RIIGDLEGILARDGASRVR 406
           RIIGDLEG LAR+G + +R
Sbjct: 781 RIIGDLEGTLAREGMTCLR 799


>Glyma06g13510.1 
          Length = 684

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 8/139 (5%)

Query: 276 VAPLIKKQAKRYQALSEKIDDLCRRI------ASDPSEPSLSSEFRTQTQTEFLLEAFRL 329
           +  L+ KQ  RYQ+L EK DDLC+R+      A+     +   + +T T   FL E F+L
Sbjct: 545 LTTLLNKQVGRYQSLQEKTDDLCKRMHENDLYANRGDVNAAREKEKTSTLEHFLEETFQL 604

Query: 330 QQGASETGQKLMALQTEI--GKSLYRDELKSEATPTTRRSLDSIRNNFKDLQRNLEIWLA 387
           Q+    TGQKLM +Q++I  G     +E++  +     R  DSIRN F ++QR LE+  A
Sbjct: 605 QRYIVATGQKLMEIQSKIVSGFVGVAEEMEKGSGIDMNRFADSIRNLFHEVQRGLEVRTA 664

Query: 388 RIIGDLEGILARDGASRVR 406
           RIIGDLEG LAR+G + +R
Sbjct: 665 RIIGDLEGTLAREGMTCLR 683