Miyakogusa Predicted Gene
- Lj2g3v1549620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1549620.1 tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus PE=2 SV=1,98.83,0,ATP-DEPENDENT
CLP PROTEASE PROTEOLYTIC SUBUNIT,NULL; ATP-DEPENDENT CLP PROTEASE
PROTEOLYTIC SUBUNIT,,CUFF.37398.1
(171 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g35280.1 191 3e-49
Glyma09g34710.1 189 1e-48
Glyma02g10050.1 116 1e-26
Glyma18g52900.1 115 2e-26
Glyma20g18310.1 104 4e-23
Glyma14g33500.1 102 1e-22
Glyma10g01550.2 82 3e-16
Glyma02g01510.1 81 4e-16
Glyma02g01510.2 81 4e-16
Glyma10g01550.1 81 5e-16
Glyma12g02960.1 77 6e-15
Glyma11g10660.1 76 2e-14
Glyma17g14510.1 74 5e-14
Glyma11g12700.1 73 1e-13
Glyma12g04870.1 72 2e-13
Glyma19g40480.1 72 3e-13
Glyma05g04020.1 70 1e-12
Glyma03g37880.1 57 7e-09
Glyma20g26950.1 54 8e-08
Glyma10g40390.1 53 2e-07
Glyma17g15720.1 50 2e-06
Glyma05g05440.2 48 4e-06
Glyma05g05440.1 48 4e-06
>Glyma01g35280.1
Length = 306
Score = 191 bits (485), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/124 (77%), Positives = 107/124 (86%)
Query: 48 TPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERIVF 107
TP +C+ TASP SK NF +S P +TF++S+PQTP+TA RGAE D MGLLLRERIVF
Sbjct: 46 TPARCVFTASPIPSKIPNFGSQSRNPGLTFELSAPQTPSTAARGAEGDVMGLLLRERIVF 105
Query: 108 LGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRADVSTI 167
LGS IDDFVADAIMSQLLLLDA DP+KDI+LFINS GGSLSATMAIYDAVQLVRADVST+
Sbjct: 106 LGSSIDDFVADAIMSQLLLLDALDPTKDIRLFINSTGGSLSATMAIYDAVQLVRADVSTV 165
Query: 168 ALGI 171
ALGI
Sbjct: 166 ALGI 169
>Glyma09g34710.1
Length = 306
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 109/126 (86%), Gaps = 2/126 (1%)
Query: 48 TPLKCILT-ASPNHSKNANFEPESLKP-RITFQMSSPQTPATAIRGAETDAMGLLLRERI 105
TP +C+ T ASP SKN NF +S P +TF++SSPQTP+TA RGAE D MGLLLRERI
Sbjct: 44 TPPRCVFTPASPIPSKNPNFGSQSRNPTSLTFELSSPQTPSTAARGAEGDVMGLLLRERI 103
Query: 106 VFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRADVS 165
VFLGS IDDFVADAIMSQ+LLLDAQDP+KDI+LFINS GGSLSATMAIYDAVQLVRADVS
Sbjct: 104 VFLGSSIDDFVADAIMSQMLLLDAQDPTKDIRLFINSTGGSLSATMAIYDAVQLVRADVS 163
Query: 166 TIALGI 171
T+ALGI
Sbjct: 164 TVALGI 169
>Glyma02g10050.1
Length = 319
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 80/126 (63%), Gaps = 8/126 (6%)
Query: 46 RTTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERI 105
RT PL + + S N P + +SP P R E DA +LLR+RI
Sbjct: 39 RTKPLSVVNASRQTLSSNWLVSPHDF----SASTASPWLP----RFEELDATNMLLRQRI 90
Query: 106 VFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRADVS 165
+FLGS +DD AD I+SQLL LDA+D KDIKLFINSPGGS++A M IYDA++L +ADVS
Sbjct: 91 IFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVS 150
Query: 166 TIALGI 171
T+ LG+
Sbjct: 151 TVCLGL 156
>Glyma18g52900.1
Length = 322
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 80/126 (63%), Gaps = 8/126 (6%)
Query: 46 RTTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERI 105
RT PL + + S N P + +SP P R E DA +LLR+RI
Sbjct: 39 RTKPLSIVNASRQTLSSNWLVSPHDF----SASTASPWLP----RFEELDATNMLLRQRI 90
Query: 106 VFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRADVS 165
+FLGS +DD AD I+SQLL LDA+D KDIKLFINSPGGS++A M IYDA++L +ADVS
Sbjct: 91 IFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVS 150
Query: 166 TIALGI 171
T+ LG+
Sbjct: 151 TVCLGL 156
>Glyma20g18310.1
Length = 84
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 56/65 (86%)
Query: 78 QMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIK 137
++S PQTP+T RG E + MGLLLRERIVFL S IDDFV DAIMSQLLLLDAQDP+KDI+
Sbjct: 18 KLSMPQTPSTTTRGMEGEVMGLLLRERIVFLRSSIDDFVVDAIMSQLLLLDAQDPTKDIR 77
Query: 138 LFINS 142
LFINS
Sbjct: 78 LFINS 82
>Glyma14g33500.1
Length = 66
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 56/64 (87%)
Query: 79 MSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKL 138
+S+PQTP+ RG E + MGLLLRERIVFLGS IDDFVA+AIMSQLLLLDAQ P+KDI+L
Sbjct: 1 LSTPQTPSMTARGTEGNVMGLLLRERIVFLGSSIDDFVANAIMSQLLLLDAQYPTKDIRL 60
Query: 139 FINS 142
FINS
Sbjct: 61 FINS 64
>Glyma10g01550.2
Length = 230
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 100 LLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQL 159
L + RI+ G +DD +A+ I++QLL LDA DP+KDI +++NSPGGS++A MAI+D ++
Sbjct: 115 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRH 174
Query: 160 VRADVSTIALGI 171
+R DVST+ +G+
Sbjct: 175 IRPDVSTVCVGL 186
>Glyma02g01510.1
Length = 311
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 100 LLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQL 159
L + RI+ G +DD +A+ I++QLL LDA DP+KDI +++NSPGGS++A MAI+D ++
Sbjct: 123 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRH 182
Query: 160 VRADVSTIALGI 171
+R DVST+ +G+
Sbjct: 183 IRPDVSTVCVGL 194
>Glyma02g01510.2
Length = 305
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 100 LLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQL 159
L + RI+ G +DD +A+ I++QLL LDA DP+KDI +++NSPGGS++A MAI+D ++
Sbjct: 117 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRH 176
Query: 160 VRADVSTIALGI 171
+R DVST+ +G+
Sbjct: 177 IRPDVSTVCVGL 188
>Glyma10g01550.1
Length = 303
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 100 LLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQL 159
L + RI+ G +DD +A+ I++QLL LDA DP+KDI +++NSPGGS++A MAI+D ++
Sbjct: 115 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRH 174
Query: 160 VRADVSTIALGI 171
+R DVST+ +G+
Sbjct: 175 IRPDVSTVCVGL 186
>Glyma12g02960.1
Length = 236
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 55/76 (72%)
Query: 95 DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIY 154
D LL+ERI+ + I D A +++QLL L++++PSK I +++NSPGG++SA +AIY
Sbjct: 43 DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAISAGLAIY 102
Query: 155 DAVQLVRADVSTIALG 170
D +Q +R+ V+TI +G
Sbjct: 103 DTMQYIRSPVNTICMG 118
>Glyma11g10660.1
Length = 238
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 55/76 (72%)
Query: 95 DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIY 154
D LL+ERI+ + I D A +++QLL L++++PSK I +++NSPGG+++A +AIY
Sbjct: 45 DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY 104
Query: 155 DAVQLVRADVSTIALG 170
D +Q +R+ V+TI +G
Sbjct: 105 DTMQYIRSPVNTICMG 120
>Glyma17g14510.1
Length = 285
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 60 HSKNANFEPESLKPRITFQMSSPQTPA-TAIRGAE--TDAMGLLLRERIVFLGSGIDDFV 116
H + AN P + R+ + +P+ P T G D L RER++F+G ID+
Sbjct: 58 HCRYANHNPSMARIRM-MPIGTPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEF 116
Query: 117 ADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRADVSTIALG 170
++ I++ +L LD+ D SK + ++IN PGG L+ +MAIYD +Q +++ V+T +G
Sbjct: 117 SNQILATMLYLDSIDNSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVG 170
>Glyma11g12700.1
Length = 273
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 82 PQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFIN 141
P TPA G D +L R RI+F+G ++ VA ++SQL+ L D + DI ++IN
Sbjct: 85 PITPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYIN 144
Query: 142 SPGGSLSATMAIYDAVQLVRADVSTIALGI 171
PGGS + +AIYD + ++ V T+ G+
Sbjct: 145 CPGGSTYSVLAIYDCMSWIKPKVGTVCFGV 174
>Glyma12g04870.1
Length = 302
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 82 PQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFIN 141
P TPA G D +L R RI+F+G ++ VA ++SQL+ L + + DI ++IN
Sbjct: 114 PITPAVMTPGGPLDLTSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATINENADILVYIN 173
Query: 142 SPGGSLSATMAIYDAVQLVRADVSTIALGI 171
PGGS + +AIYD + ++ V T+ G+
Sbjct: 174 CPGGSTYSVLAIYDCMSWIKPKVGTVCFGV 203
>Glyma19g40480.1
Length = 271
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 51/67 (76%)
Query: 100 LLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQL 159
L + RIV G +DD +++ I++QLL LDA DP+KDI +++NS GGS++A MAI+D ++
Sbjct: 13 LFQYRIVRCGGAVDDDMSNIIVAQLLYLDAIDPNKDIVMYVNSLGGSVAAAMAIFDTMRH 72
Query: 160 VRADVST 166
+R DVST
Sbjct: 73 IRPDVST 79
>Glyma05g04020.1
Length = 312
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 95 DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIY 154
D L RER++F+G ID+ ++ I++ +L LD+ + SK + ++IN PGG L+ +MAIY
Sbjct: 122 DVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIENSKKLYMYINGPGGDLTPSMAIY 181
Query: 155 DAVQLVRADVSTIALG 170
D +Q +++ V+T +G
Sbjct: 182 DTMQSLQSPVATHCVG 197
>Glyma03g37880.1
Length = 256
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 11/93 (11%)
Query: 80 SSPQTPATAIRGAETDAM-GLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKL 138
SSP PA A +G E M + RI+ G +DD +++ +++QLL LD +
Sbjct: 43 SSPYFPAYA-QGHEPPPMVQERFQSRIIRCGGAVDDDMSNILVAQLLYLD---------V 92
Query: 139 FINSPGGSLSATMAIYDAVQLVRADVSTIALGI 171
+SPGGS++A MAI+D ++ +R DVST+ +G+
Sbjct: 93 LTSSPGGSVTAGMAIFDTMRHIRPDVSTVCIGL 125
>Glyma20g26950.1
Length = 453
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 90 RGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPG----- 144
+ A D LLL RI +LG I V + I++Q + LD +P+K I L+INS G
Sbjct: 227 KTAPPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTLNEK 286
Query: 145 ----GSLSATMAIYDAVQLVRADVSTIALGI 171
GS + +I D + V+ADV T+ G+
Sbjct: 287 NETVGSETEAYSIADMMSYVKADVYTVNCGM 317
>Glyma10g40390.1
Length = 372
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 99 LLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPG---------GSLSA 149
LLL RI +LG I V + I++Q + LD +PSK I L+INS G GS +
Sbjct: 155 LLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNETVGSETE 214
Query: 150 TMAIYDAVQLVRADVSTIALGI 171
+I D + V+ADV T+ G+
Sbjct: 215 AYSIADMMSYVKADVYTVNCGM 236
>Glyma17g15720.1
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Query: 49 PLKCILTASPNHSKNANFEPESLKP---------RITFQMSSPQTPATAIRGAETDAMGL 99
P I +AS S + P SL P R M P +A D
Sbjct: 50 PYAGICSASSPFSGH-KLRPSSLNPASFLGSNAKRGVVTMVIPFQRGSAWEQPPPDLASY 108
Query: 100 LLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPG--------GSLSATM 151
L + RIV+LG + V + I+++ L L +D K I L+INS G G +
Sbjct: 109 LYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAF 168
Query: 152 AIYDAVQLVRADVSTIALG 170
AIYD ++ V+ + T+ +G
Sbjct: 169 AIYDVMRYVKPPIFTLCVG 187
>Glyma05g05440.2
Length = 313
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 95 DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPG--------GS 146
D L + RIV+LG + V + I+++ L L +D K I L+INS G G
Sbjct: 113 DLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGY 172
Query: 147 LSATMAIYDAVQLVRADVSTIALG 170
+ AIYD ++ V+ + T+ +G
Sbjct: 173 ETEAFAIYDVMRYVKPPIFTLCVG 196
>Glyma05g05440.1
Length = 313
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 95 DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPG--------GS 146
D L + RIV+LG + V + I+++ L L +D K I L+INS G G
Sbjct: 113 DLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGY 172
Query: 147 LSATMAIYDAVQLVRADVSTIALG 170
+ AIYD ++ V+ + T+ +G
Sbjct: 173 ETEAFAIYDVMRYVKPPIFTLCVG 196