Miyakogusa Predicted Gene

Lj2g3v1549590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1549590.1 tr|D7MPV6|D7MPV6_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683248
PE,36.59,0.000000000002,seg,NULL,CUFF.37382.1
         (301 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g34680.1                                                       450   e-127
Glyma01g35230.1                                                       443   e-125

>Glyma09g34680.1 
          Length = 303

 Score =  450 bits (1158), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 224/303 (73%), Positives = 241/303 (79%), Gaps = 2/303 (0%)

Query: 1   MDSSDSH--EHEIPRKHGVVLAILRWGLAIXXXXXXXXXXXXXXXXXXXXXXXXSVTGAI 58
           MD  DS   E E P+K+GVV  ILRW LAI                        S+   I
Sbjct: 1   MDPPDSQSQEQEAPKKNGVVFVILRWILAILFPFLLFLSIPFLLGLLVLMFADFSIPNPI 60

Query: 59  SLPSQCKIVSTGVDIRSSKVCELGLLNYKAKDVFHHFERSKFRCRYDYYWASVFKVEYVD 118
           SLPSQCKIVSTGVDIRSSK+CELGLL+YKAKDVFHHFERSKFRCRYDYYWASVFKVEY D
Sbjct: 61  SLPSQCKIVSTGVDIRSSKICELGLLDYKAKDVFHHFERSKFRCRYDYYWASVFKVEYKD 120

Query: 119 RFSGQTQVAFAEAPKEALPPYCRPNFGAAWLTQYKYKVNETYDCWYTSGISKVHLYQDNL 178
            FSGQTQVAFAEAP EALP YCRPNFGAAWLTQYK+KVNETYDCWYTSGISKV L+QD+L
Sbjct: 121 HFSGQTQVAFAEAPNEALPLYCRPNFGAAWLTQYKFKVNETYDCWYTSGISKVRLHQDSL 180

Query: 179 FGCHADEQSTIEKIKQKAIMAMEMVNSWFSDKRRTNNWRWGAIAGLVTGFSTSLISITFI 238
           FGC A EQST+EK +Q + MAMEMV SWFS + RT +WRW  +AG+VTGF TSLISITFI
Sbjct: 181 FGCDAHEQSTLEKSRQYSTMAMEMVISWFSSRGRTKHWRWETLAGVVTGFLTSLISITFI 240

Query: 239 GFLQQLLSSVYQSFKTWVFPRRVNAVLIRRACFLLAYLSFVAWLAIEYGKRLGLMDIFRS 298
            FLQ LL S+YQSF TW+F  RVNAVLIRRACFLLAYLSFVAWLAIEYGKRLGLMDIFR 
Sbjct: 241 RFLQLLLPSLYQSFTTWIFSWRVNAVLIRRACFLLAYLSFVAWLAIEYGKRLGLMDIFRL 300

Query: 299 LKS 301
            KS
Sbjct: 301 PKS 303


>Glyma01g35230.1 
          Length = 305

 Score =  443 bits (1140), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/305 (72%), Positives = 237/305 (77%), Gaps = 4/305 (1%)

Query: 1   MDSSDSH----EHEIPRKHGVVLAILRWGLAIXXXXXXXXXXXXXXXXXXXXXXXXSVTG 56
           MD  DSH    E E P+K+ VV  ILRW LAI                        S+  
Sbjct: 1   MDPPDSHSQSQEQEAPKKNDVVFLILRWVLAILFPFLFFLSIPFLLGLLVLMFADFSIPN 60

Query: 57  AISLPSQCKIVSTGVDIRSSKVCELGLLNYKAKDVFHHFERSKFRCRYDYYWASVFKVEY 116
            ISLPSQCKIVSTGVDIRSSK+CELGLLNYKAKDVFHHFERSKFRCRYDYYWASVFKVEY
Sbjct: 61  PISLPSQCKIVSTGVDIRSSKICELGLLNYKAKDVFHHFERSKFRCRYDYYWASVFKVEY 120

Query: 117 VDRFSGQTQVAFAEAPKEALPPYCRPNFGAAWLTQYKYKVNETYDCWYTSGISKVHLYQD 176
            D FSGQTQVAFAEAP EALP YCRPNFGAAW TQYK+KVNE+YDCWYTSG SKVHL+QD
Sbjct: 121 KDHFSGQTQVAFAEAPNEALPLYCRPNFGAAWFTQYKFKVNESYDCWYTSGNSKVHLHQD 180

Query: 177 NLFGCHADEQSTIEKIKQKAIMAMEMVNSWFSDKRRTNNWRWGAIAGLVTGFSTSLISIT 236
           NLFGC A EQST+EK +Q + MAMEM  SW S + RT +WRW  +AG+VTGF TSLISIT
Sbjct: 181 NLFGCDAHEQSTLEKSRQYSTMAMEMAISWLSSRGRTKHWRWETLAGVVTGFLTSLISIT 240

Query: 237 FIGFLQQLLSSVYQSFKTWVFPRRVNAVLIRRACFLLAYLSFVAWLAIEYGKRLGLMDIF 296
           FI FLQ  LSS++QSF TW+F  RVNAVLIRRACFLLAYLSFVAWL IEYGKRLGLMDIF
Sbjct: 241 FIRFLQLFLSSLHQSFTTWIFSWRVNAVLIRRACFLLAYLSFVAWLVIEYGKRLGLMDIF 300

Query: 297 RSLKS 301
           R  KS
Sbjct: 301 RFPKS 305