Miyakogusa Predicted Gene

Lj2g3v1497160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1497160.1 tr|B9GZI1|B9GZI1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_757200 PE=4
SV=1,75,8e-19,seg,NULL,CUFF.37272.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01970.1                                                       125   8e-30
Glyma09g33940.1                                                       124   2e-29
Glyma01g01970.2                                                       124   3e-29

>Glyma01g01970.1 
          Length = 112

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 63/81 (77%), Positives = 67/81 (82%), Gaps = 1/81 (1%)

Query: 29  FDDLHFPFDPISTQERKDEVMLVLKSDIMAALDKEVKSLDEDNWKFEGPRSRINLTSRRG 88
            DD H P DPIS+QERKDE MLVLKSD+MAAL+KEVKSL EDNWKFEGPRSRI+L S RG
Sbjct: 33  IDDFHLPCDPISSQERKDEAMLVLKSDLMAALNKEVKSLVEDNWKFEGPRSRIHLVSHRG 92

Query: 89  GGGPLPWQTEISKNWNLPPPK 109
           GG  L   TEISKNWNL PPK
Sbjct: 93  GGH-LYRPTEISKNWNLTPPK 112


>Glyma09g33940.1 
          Length = 111

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/81 (76%), Positives = 66/81 (81%), Gaps = 2/81 (2%)

Query: 29  FDDLHFPFDPISTQERKDEVMLVLKSDIMAALDKEVKSLDEDNWKFEGPRSRINLTSRRG 88
            DD H P DPIS+QERKDE M+VLKSD+MAALDKEVKSL EDNWKFEGPRSRI+L S RG
Sbjct: 33  IDDFHLPCDPISSQERKDEAMIVLKSDLMAALDKEVKSLVEDNWKFEGPRSRIHLVSHRG 92

Query: 89  GGGPLPWQTEISKNWNLPPPK 109
           G    P  TEISKNWNL PPK
Sbjct: 93  GHLYRP--TEISKNWNLTPPK 111


>Glyma01g01970.2 
          Length = 111

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/81 (76%), Positives = 66/81 (81%), Gaps = 2/81 (2%)

Query: 29  FDDLHFPFDPISTQERKDEVMLVLKSDIMAALDKEVKSLDEDNWKFEGPRSRINLTSRRG 88
            DD H P DPIS+QERKDE MLVLKSD+MAAL+KEVKSL EDNWKFEGPRSRI+L S RG
Sbjct: 33  IDDFHLPCDPISSQERKDEAMLVLKSDLMAALNKEVKSLVEDNWKFEGPRSRIHLVSHRG 92

Query: 89  GGGPLPWQTEISKNWNLPPPK 109
           G    P  TEISKNWNL PPK
Sbjct: 93  GHLYRP--TEISKNWNLTPPK 111