Miyakogusa Predicted Gene
- Lj2g3v1496120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1496120.1 Non Chatacterized Hit- tr|B8ATJ8|B8ATJ8_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,63.41,0.000000003,In Between Ring fingers,Zinc finger,
C6HC-type; RING/U-box,NULL; IBR,Zinc finger, C6HC-type;
SUBFAMI,CUFF.37273.1
(256 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g33900.1 474 e-134
Glyma07g04970.1 58 1e-08
Glyma09g08670.1 57 2e-08
Glyma15g20350.1 55 7e-08
Glyma11g23850.1 51 1e-06
Glyma16g01530.1 49 6e-06
>Glyma09g33900.1
Length = 349
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/256 (85%), Positives = 238/256 (92%)
Query: 1 MIPPGLLKHLLADEDYERWESMMLEKTLASMSDVVHCPRCETPCIEDEDHHAQCPQCFFS 60
MIPPGLLK LL D DYERWESMMLEKTLASMSDVV+CPRCETPCIEDED HAQCP+C+FS
Sbjct: 94 MIPPGLLKQLLDDTDYERWESMMLEKTLASMSDVVYCPRCETPCIEDEDQHAQCPKCYFS 153
Query: 61 FCTLCRERRHVGIACMTLEMKIQILKDRQNLSQLKGDQKRKELEMINEMLSMKEIHRDSK 120
FCTLCRERRHVGIACM+L+MK+QIL+DRQNLSQLK DQKR+E E INEML+MKEIHRDSK
Sbjct: 154 FCTLCRERRHVGIACMSLDMKLQILQDRQNLSQLKEDQKRREREKINEMLNMKEIHRDSK 213
Query: 121 LCPSCDMAISRTEGCNKMKCGNCGQYFCYRCNKAIDETDPYGHFRDGSCELFPREMIDAW 180
LCPSCDMAISRTEGCNKMKCGNC QYFCYRCNKAID +DPYGHFRDGSCELFPREM+D+W
Sbjct: 214 LCPSCDMAISRTEGCNKMKCGNCEQYFCYRCNKAIDASDPYGHFRDGSCELFPREMVDSW 273
Query: 181 QENLNARQLVGQVQAELFPQRGTACPSCRQFNAKIGNNNHMFCWACQSHYCYLCNEVVRR 240
+E +N RQ VGQ+QAELFPQ G ACPSCRQ+N KIGNNNH+FCWACQ HYCYLC +VRR
Sbjct: 274 EERINHRQAVGQLQAELFPQHGLACPSCRQYNPKIGNNNHLFCWACQRHYCYLCKAIVRR 333
Query: 241 GTKHYGPKGCKQHSEG 256
GTKHYGPKGCKQHSEG
Sbjct: 334 GTKHYGPKGCKQHSEG 349
>Glyma07g04970.1
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 1 MIPPGLLKHLLADEDYERWESMMLEKTLASMSDVVHCP--RCETPCIEDEDH---HAQCP 55
+I P + + E ++RWE + E L S +CP C I D + ++CP
Sbjct: 142 VIEPQYCRSFIPKEVFDRWEDALCE-NLVPGSQKFYCPFKDCSAMLINDAEEIVTVSECP 200
Query: 56 QCFFSFCTLCRERRHVGIACMTLEMKIQILKDRQNLSQLKGDQKRKELEMINEMLSMKEI 115
C FC C+ H G+ C K+ QNL + ++ +E M+ E+ K
Sbjct: 201 HCNRLFCAQCKVSWHAGVEC----------KEFQNLKEY---EREREDLMVMELAKNKNW 247
Query: 116 HRDSKLCPSCDMAISRTEGCNKMKCGNCGQYFCYRCNKA 154
R CP C + R +GC + C C FCY C +
Sbjct: 248 KR----CPKCSFYVERIDGCTHISC-RCDHEFCYACGSS 281
>Glyma09g08670.1
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 8 KHLLADEDYERWESMMLEKTLASMSDVVHCPRCETPCI------EDEDHHAQCPQCFFSF 61
+ +LA ++RW + E +A+ + +CP + + E+ A+CP C F
Sbjct: 187 REILAPRVFDRWGKALCEAVIAA-EEKFYCPFADCSVMLIRGIEENNIREAECPNCRRLF 245
Query: 62 CTLCRERRHVGIACMTLEMKIQILKDRQNLSQLKGDQKRKELEMINEMLSMKEIHRDSKL 121
C CR H + C ++ +L D++ KE M+ + + + R
Sbjct: 246 CAQCRVPWHDNMPC-------------EDFQKLNADERDKEDIMLMNLANQMQWKR---- 288
Query: 122 CPSCDMAISRTEGCNKMKCGNCGQYFCYRC 151
CP C +++++GC MKC CG FCY C
Sbjct: 289 CPRCRFYVAKSDGCMYMKC-RCGNAFCYNC 317
>Glyma15g20350.1
Length = 285
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 8 KHLLADEDYERWESMMLEKTLASMSDVVHCPRCETPCI-----EDED-HHAQCPQCFFSF 61
+ +L+ ++RW + + E + + + +CP + + ED D +CP C F
Sbjct: 139 REILSPRVFDRWGNALCEAVIDA-EEKFYCPFADCSAMLIRASEDADIRECECPNCRRLF 197
Query: 62 CTLCRERRHVGIACMTLEMKIQILKDRQNLSQLKGDQKRKELEMINEMLSMKEIHRDSKL 121
C LCR H I C + +L +++ +E M+ + + R
Sbjct: 198 CALCRVPWHENIPC-------------EEFQKLNAEEREREDIMLMSLAKQMQWKR---- 240
Query: 122 CPSCDMAISRTEGCNKMKCGNCGQYFCYRCNKAI 155
CP C ++++EGC M+C CG FCY+C I
Sbjct: 241 CPHCRFYVAKSEGCMYMRC-RCGNSFCYKCGAPI 273
>Glyma11g23850.1
Length = 203
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 2 IPPGLLKHLLADEDYERWESMMLEKTLASMSDVVHCP--RCETPCIEDEDH---HAQCPQ 56
+ P ++LA E RWE++M E + + +CP C + D + A+CP
Sbjct: 65 LKPEYFHNILASEVIVRWETVMCESMIVELEKT-YCPFKDCSVLLVNDGEKVVTSAECPS 123
Query: 57 CFFSFCTLCRERRHVGIACMTLEMKIQILKDRQNLSQLKGDQKRKELEMINEMLSMKEIH 116
C FC C+ H ++C + +++ ++ K LE N+ + +
Sbjct: 124 CHRLFCAQCKVPWHGSMSC-------------EEFQEIERNKDEKVLE--NKFFKLAKEE 168
Query: 117 RDSKLCPSCDMAISRTEGCNKMKCGNCGQYFC 148
+ K CP C M + R EGC+ M C + C
Sbjct: 169 KWQK-CPRCTMFVQRREGCDHMTCRYIFSWLC 199
>Glyma16g01530.1
Length = 288
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 23/153 (15%)
Query: 1 MIPPGLLKHLLADEDYERWESMMLEKTLASMSDVVHCP--RCETPCIEDEDHH---AQCP 55
++ P + ++ E ++RWE+ + E ++ S +CP C I D ++CP
Sbjct: 144 VVEPQYCRSIIPKEVFDRWENAIFENSVLR-SQKFYCPFKDCSAMYIRDAGEVVTVSECP 202
Query: 56 QCFFSFCTLCRERRHVGIACMTLEMKIQILKDRQNLSQLKGDQKRKELEMINEMLSMKEI 115
C FC C+ H I C LK ++ +E M+ E+ K
Sbjct: 203 YCNRLFCAQCKVPWHSEIGC-------------NEFQNLKKYEREREDLMVMELAKNKSW 249
Query: 116 HRDSKLCPSCDMAISRTEGCNKMKCGNCGQYFC 148
R CP CD + R +GC + C + C
Sbjct: 250 KR----CPKCDFYVERIDGCAHISCMDAKPILC 278