Miyakogusa Predicted Gene

Lj2g3v1472980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1472980.1 tr|B8CEW1|B8CEW1_THAPS Valine--tRNA ligase-like
protein OS=Thalassiosira pseudonana
GN=THAPSDRAFT_42,39.5,3e-19,tRNA-synt_1,Aminoacyl-tRNA synthetase,
class Ia; no description,NULL; Nucleotidylyl
transferase,NULL,CUFF.37255.1
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g23940.1                                                       230   3e-61
Glyma05g11620.1                                                       117   3e-27

>Glyma17g23940.1 
          Length = 417

 Score =  230 bits (586), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 109/119 (91%), Positives = 115/119 (96%)

Query: 1   MSKTLGNVIDPIDTIKDFGTDALRFTLALGTAGQDLNLSSERLTSNKAFTNKLWNAGKFI 60
           MSKTLGNVIDP+DTIK+FGTDALRFTLALGTAGQDLNLS+ERLTSNKAFTNKLWNAGKFI
Sbjct: 41  MSKTLGNVIDPLDTIKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFI 100

Query: 61  LQNLPNENDTSAWENILSHKFDGEGSVLNLPLPECWVVSKLHLLIDSVSASYDKFYFGE 119
           LQNLPNENDTSAWE ILS+KFD E +V+NLPLPECWVVSKLHLLIDS SASYDKFYFGE
Sbjct: 101 LQNLPNENDTSAWEEILSYKFDSEVTVVNLPLPECWVVSKLHLLIDSASASYDKFYFGE 159


>Glyma05g11620.1 
          Length = 134

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 14/91 (15%)

Query: 29  LGTAGQDLNLSSERLTSNKAFTNKLWNAGKFILQNLPNENDTSAWENILSHKFDGEGSVL 88
           LGTAGQDLNLS+ERLTSNKAFTNKLWNAGKFIL              +++  F+ E +V+
Sbjct: 1   LGTAGQDLNLSTERLTSNKAFTNKLWNAGKFIL--------------LVAILFNNEVTVV 46

Query: 89  NLPLPECWVVSKLHLLIDSVSASYDKFYFGE 119
           NLPLP+CWVVSKLHL  + VSASYDKF+FGE
Sbjct: 47  NLPLPKCWVVSKLHLFNEFVSASYDKFFFGE 77