Miyakogusa Predicted Gene

Lj2g3v1468350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1468350.1 Non Chatacterized Hit- tr|I3SBY2|I3SBY2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=3 SV=1,98.59,2e-33,no
description,Homeodomain-like; Q6BHF3_DEBHA_Q6BHF3;,DNA-directed RNA
polymerase, subunit N/Rpb10; ,CUFF.37211.1
         (71 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g04080.1                                                       142   8e-35
Glyma01g03590.1                                                       142   8e-35
Glyma06g10100.4                                                       140   3e-34
Glyma06g10100.3                                                       140   3e-34
Glyma06g10100.1                                                       140   3e-34
Glyma04g10140.3                                                       140   4e-34
Glyma04g10140.2                                                       140   4e-34
Glyma04g10140.1                                                       140   4e-34
Glyma06g10100.2                                                       130   3e-31

>Glyma02g04080.1 
          Length = 71

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 69/71 (97%), Positives = 69/71 (97%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSDTS 71
          NYNTLDKSD S
Sbjct: 61 NYNTLDKSDPS 71


>Glyma01g03590.1 
          Length = 71

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 69/71 (97%), Positives = 69/71 (97%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSDTS 71
          NYNTLDKSD S
Sbjct: 61 NYNTLDKSDPS 71


>Glyma06g10100.4 
          Length = 71

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 67/69 (97%), Positives = 68/69 (98%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSD 69
          NYNTLDKSD
Sbjct: 61 NYNTLDKSD 69


>Glyma06g10100.3 
          Length = 71

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 67/69 (97%), Positives = 68/69 (98%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSD 69
          NYNTLDKSD
Sbjct: 61 NYNTLDKSD 69


>Glyma06g10100.1 
          Length = 71

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 67/69 (97%), Positives = 68/69 (98%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSD 69
          NYNTLDKSD
Sbjct: 61 NYNTLDKSD 69


>Glyma04g10140.3 
          Length = 71

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 69/71 (97%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSDTS 71
          NYNTLDKSD +
Sbjct: 61 NYNTLDKSDPN 71


>Glyma04g10140.2 
          Length = 71

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 69/71 (97%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSDTS 71
          NYNTLDKSD +
Sbjct: 61 NYNTLDKSDPN 71


>Glyma04g10140.1 
          Length = 71

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 69/71 (97%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNTLDKSDTS 71
          NYNTLDKSD +
Sbjct: 61 NYNTLDKSDPN 71


>Glyma06g10100.2 
          Length = 69

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 63/64 (98%)

Query: 1  MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
          MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1  MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 61 NYNT 64
          NYN+
Sbjct: 61 NYNS 64