Miyakogusa Predicted Gene

Lj2g3v1468300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1468300.1 tr|Q2R6R5|Q2R6R5_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os11g19130 PE=2 SV=1,33.78,3e-18,SPT2
chromatin protein,Chromatin SPT2; SPT2,Chromatin SPT2; SUBFAMILY NOT
NAMED,NULL; YEAST SPT2-REL,CUFF.37215.1
         (475 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g36790.1                                                       391   e-109
Glyma01g23760.1                                                       382   e-106
Glyma01g23760.2                                                       115   1e-25

>Glyma08g36790.1 
          Length = 499

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 242/441 (54%), Positives = 285/441 (64%), Gaps = 35/441 (7%)

Query: 44  PRQPTKEEIEYLGLRQKLKENHRKQLRKENSAS---LKDCS-ATKKKLPNDNFGSFFGPS 99
           PR+P+KEE+EYL LRQKLKE+ RKQ++KE+S S    +D +  +K KLP DN+GSFFGPS
Sbjct: 36  PRKPSKEEMEYLELRQKLKESIRKQMKKESSGSGTSRRDSTDRSKNKLPYDNYGSFFGPS 95

Query: 100 QPVIAPRVIQESKSLLENQHLQSRLXXXXXXXXXXXXXXXXXXXPSSHKQPPKVSETKIK 159
           QPVIA RVIQESKSLLENQHL SR                     SSH   PKVSE K+K
Sbjct: 96  QPVIAQRVIQESKSLLENQHLASRFSDPHRIKKNQNKVPSGGSKSSSHNLAPKVSEMKVK 155

Query: 160 AQTVKDTRDYSFLMSDDAELPAPAKELPSRNTSVHNSEGRPAQVARMIKQPLINGGKPAR 219
           AQ +K+TRDYSFL+SDDAELPAP+K  PS+N  + NSEGRPAQV    K PL NGGK  R
Sbjct: 156 AQKIKNTRDYSFLLSDDAELPAPSKAPPSQNMPIRNSEGRPAQVPARNKLPLSNGGKHVR 215

Query: 220 GSGENRKPAVGAGHSVPKSGPSCKLSDTNKSGMASVDSRKQLGSNSGIGPGRPVVSKQLP 279
            S E R     AGH  PKSG S + S T+K  MAS DSRKQ G+NSG GPGRPV  K LP
Sbjct: 216 ASHEERNVGSAAGHLPPKSGSSYRTSSTSKPSMASADSRKQPGNNSGNGPGRPVGPKGLP 275

Query: 280 SKMPASTMGNKSSTLGMKRSVNGVQKPLPSKLNSSAPKQFVEQR---------------- 323
           SK+   T GNKSST  +K  VNG+QK LPSK + S PKQ VEQR                
Sbjct: 276 SKISVGTTGNKSSTPAIKNPVNGMQKSLPSKNHPSIPKQIVEQRISKHSVEQRIPKQSVE 335

Query: 324 -------RDVRVQNKPLPSKVHSSAPKQIVDQRKDSRDQNKPKMVPKQPVASSRAQVNKP 376
                   + R+Q + +  ++     KQ V+QRKD R+  +PKM PKQPVASS+ Q+N+ 
Sbjct: 336 QRFPKQSVEQRIQKQSVEQRIQ----KQSVEQRKDIRELYRPKMAPKQPVASSKPQINR- 390

Query: 377 PLKQIPKRSDLPVHRPKNKVGKRHPXXXXXXXXGMDYRNMIRSMFNYNPNKFVGDDDDDN 436
           PLKQ    +     RPK K  KR           +D RNMIR+MFNYNPNKFV DDD D+
Sbjct: 391 PLKQNSVHTASQDRRPKPKAAKR---PFDDEEDEVDVRNMIRNMFNYNPNKFVDDDDVDD 447

Query: 437 MEAGFDEIMREEKRSALIAKK 457
           MEAGFDEI+REEKRS +IAKK
Sbjct: 448 MEAGFDEILREEKRSEMIAKK 468


>Glyma01g23760.1 
          Length = 703

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/418 (56%), Positives = 285/418 (68%), Gaps = 19/418 (4%)

Query: 44  PRQPTKEEIEYLGLRQKLKENHRKQLRKENSA--SLKDCSA--TKKKLPNDNFGSFFGPS 99
           PR+P+KEE+EYL LRQKLKE+ RKQ++K++SA  +L+  S    K KLP DN+GSFFGPS
Sbjct: 119 PRKPSKEEMEYLELRQKLKESIRKQMKKDSSANGTLRRDSTDRNKNKLPYDNYGSFFGPS 178

Query: 100 QPVIAPRVIQESKSLLENQHLQSRLXXXXXXXXXXXXXXXXXXXPSSHKQPPKVSETKIK 159
           QPVIA RVIQESKSLLENQHL SR                     SSH   PKVSE ++K
Sbjct: 179 QPVIAQRVIQESKSLLENQHLASRFSNPQHIKKNQNKVPSGGSKSSSHNLAPKVSEIQVK 238

Query: 160 AQTVKDTRDYSFLMSDDAELPAPAKELPSRNTSVHNSEGRPAQVARMIKQPLINGGKPAR 219
           AQ +K+TRDYSFL+SDDAELPAP+K  P +N  + NSEGRPAQV    K PL NGGK  R
Sbjct: 239 AQKIKNTRDYSFLLSDDAELPAPSKAPPPQNMPIRNSEGRPAQVPARSKLPLSNGGKHVR 298

Query: 220 GSGENRKPAVGAGHSVPKSGPSCKLSDTNKSGMASVDSRKQLGSNSGIGPGRPVVSKQLP 279
            S E R     AG   PKSG S K   T+K  MAS DSRKQLG+NS  GPG PV  K LP
Sbjct: 299 ASHEERNVGSAAGRLPPKSGSSYK---TSKPSMASADSRKQLGNNSDNGPGWPVGPKGLP 355

Query: 280 SKMPASTMGNKSSTLGMKRSVNGVQKPLPSKLNSSAPKQFVEQRRDVRVQNKPLPSKVHS 339
           SK+   T GNKSS  G+K SVNG++K LPSK + S PKQ V+Q    R+  + +  ++  
Sbjct: 356 SKISVGTTGNKSSAPGIKNSVNGMRKSLPSKNHPSIPKQSVDQ----RISKQSVEQRI-- 409

Query: 340 SAPKQIVDQRKDSRDQNKPKMVPKQPVASSRAQVNKPPLKQIPKRSDLPVHRPKNKVGKR 399
             PKQ V+QR+D R+ N+PKM PKQPVASS+ Q+NK PLKQ    +     RPK+KV KR
Sbjct: 410 --PKQSVEQRRDIRELNRPKMTPKQPVASSKPQINK-PLKQNSVHTASQDRRPKHKVAKR 466

Query: 400 HPXXXXXXXXGMDYRNMIRSMFNYNPNKFVGDDDDDNMEAGFDEIMREEKRSALIAKK 457
                      +D+RN+IR++FNYNPNKFV DDDDDNMEAGFDEI+REEKRS +IAK+
Sbjct: 467 ---PFDDDEDEVDFRNVIRNIFNYNPNKFVDDDDDDNMEAGFDEILREEKRSEMIAKR 521


>Glyma01g23760.2 
          Length = 158

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 88/121 (72%), Gaps = 4/121 (3%)

Query: 337 VHSSAPKQIVDQRKDSRDQNKPKMVPKQPVASSRAQVNKPPLKQIPKRSDLPVHRPKNKV 396
           V    PKQ V+QR+D R+ N+PKM PKQPVASS+ Q+NKP LKQ    +     RPK+KV
Sbjct: 12  VEQRIPKQSVEQRRDIRELNRPKMTPKQPVASSKPQINKP-LKQNSVHTASQDRRPKHKV 70

Query: 397 GKRHPXXXXXXXXGMDYRNMIRSMFNYNPNKFVGDDDDDNMEAGFDEIMREEKRSALIAK 456
            KR           +D+RN+IR++FNYNPNKFV DDDDDNMEAGFDEI+REEKRS +IAK
Sbjct: 71  AKR---PFDDDEDEVDFRNVIRNIFNYNPNKFVDDDDDDNMEAGFDEILREEKRSEMIAK 127

Query: 457 K 457
           +
Sbjct: 128 R 128