Miyakogusa Predicted Gene

Lj2g3v1468090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1468090.1 Non Chatacterized Hit- tr|K3Y162|K3Y162_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,68.75,0.000005,seg,NULL; DNA BINDING,NULL; FAMILY NOT
NAMED,NULL,CUFF.37185.1
         (434 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g02380.1                                                       437   e-123
Glyma09g33600.1                                                       339   3e-93

>Glyma01g02380.1 
          Length = 442

 Score =  437 bits (1125), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/456 (55%), Positives = 291/456 (63%), Gaps = 78/456 (17%)

Query: 1   MPKRNSSVCNHPTTTPRRSPRL-----NXXXXXXXXXXXXXXAESRICTVGLRRSPRFIN 55
           MP RN SV      TPRRSPR      +               +S  C VG RRSPR +N
Sbjct: 1   MPARNFSV-----HTPRRSPRFLPQQNHDTPNPKSAKLSVSANKSEKCAVGSRRSPR-LN 54

Query: 56  NGVAEVPSLRRSPRFSDDQTLENEQRTPEKLSKPGNASGGSVKSARVKKGSVAKKKENSA 115
           N   + P LRRSP  +++                    G  +K  RVKKG V   KEN  
Sbjct: 55  NVEEQSPPLRRSPMLNNEPV------------------GKQLKGTRVKKGGVTATKENRV 96

Query: 116 VADEGIAVEDGGKGKGRN---GVLAGKRKR---------------------GGGG----- 146
           V+DEG     GG+ K RN   G   G++K                      GGG      
Sbjct: 97  VSDEGFG---GGRKKERNRKRGFGGGRKKERNWKRVKVKTKENRVVLDEGIGGGAKKEEN 153

Query: 147 ---------EIHEGWTKEQELALQRAYYSAKPSPHFWKNVSKLVPGKSQQDCFDRIHHDY 197
                    +I +GWTKEQELALQRAY++AKPSPHFWKNVSKLVPGKSQQDCFDRIH DY
Sbjct: 154 GKRVKTKANQISKGWTKEQELALQRAYFAAKPSPHFWKNVSKLVPGKSQQDCFDRIHCDY 213

Query: 198 MTPPQSQPRSRAKTMNSSPLHKFSISASKVLKPIDKTAKRSKSFKQKSFITQKSIEKLLQ 257
           MTPPQ+QP SRAKT+ SSP+H+FSISASK+LKPIDKT ++S   K K+ ITQKSIEKLLQ
Sbjct: 214 MTPPQTQPHSRAKTLKSSPIHQFSISASKLLKPIDKTVRKSNVLKPKNIITQKSIEKLLQ 273

Query: 258 NRFKVDKDREGDIFSVLEPNIEIPTNALQSSPTFSTPKQLKENQGLLNSCTGTSSSSQKK 317
           +  KVD DRE DIFSVLEPN +  TNALQ S   STPKQ KEN+G L +CT TSSSS KK
Sbjct: 274 HHLKVDLDREVDIFSVLEPNTDFSTNALQPSEALSTPKQQKENKGFLQNCTETSSSSHKK 333

Query: 318 TLSRFSNSRVSDVVSPPVLKQVKNKVQHEKYINQLRCREARRMAASKRTKKTITGKMMGE 377
            LSRFS S V+++VSPPVLK+VKN+V HEKYINQLRCRE+RR AA+         K++GE
Sbjct: 334 PLSRFSGSCVTELVSPPVLKKVKNRVMHEKYINQLRCRESRRRAAAT--------KIIGE 385

Query: 378 GSSILKKDAVKEAKVALVSEAKDAINKFQQSQVNFM 413
           G+SI K+D VK AKVALVSEA+DAINKFQQSQVN M
Sbjct: 386 GTSIQKRDVVKGAKVALVSEARDAINKFQQSQVNLM 421


>Glyma09g33600.1 
          Length = 389

 Score =  339 bits (870), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 205/363 (56%), Positives = 241/363 (66%), Gaps = 26/363 (7%)

Query: 42  ICTVGLRRSPRF---INNGVAEVPSLRRSPRFSDDQTLENEQRTPEKLSKP----GNASG 94
           I  V  RRSPRF    NN      S +RS   +    L N ++ P  L +       +S 
Sbjct: 17  ITAVTPRRSPRFPPQQNNDTPTPKSAKRSVSSNKSDKLNNVEQRPPPLRRCPRLNNESSD 76

Query: 95  GSVKSARVKKGSVAKKKENSAVADEGIAVEDGG---KGKGRNGVLAGKRKRGGGGEIHEG 151
             +K  RVKKG  A+ KEN  V+DEG   E+     K K    VL      G  G   +G
Sbjct: 77  KKLKDTRVKKGGEAETKENRVVSDEGRKKEENEERVKTKANCFVL----DEGFDGGREKG 132

Query: 152 WTKEQELALQRAYYSAKPSPHFWKNVSKLVPGKSQQDCFDRIHHDYMTPPQSQPRSRAKT 211
              EQELALQRAY +AKPSPHFWKNVSKLVPGKSQQDCFDRIH DYMTPP++QPR RAKT
Sbjct: 133 ---EQELALQRAYLAAKPSPHFWKNVSKLVPGKSQQDCFDRIHCDYMTPPETQPRLRAKT 189

Query: 212 MNSSPLHKFSISASKVLKPIDKTAKRSKSFKQKSFITQKSIEKLLQNRFKVDKDREGDIF 271
             SSP+H+FSISASK+LKP+DKTA+RS   K K+ ITQKS++KLLQ   KVD DREGDIF
Sbjct: 190 FKSSPIHQFSISASKLLKPMDKTARRSNVLKPKNIITQKSVDKLLQRHLKVDLDREGDIF 249

Query: 272 SVLEPNIEIPTNALQSSPTFSTPKQLKENQGLLNSCTGTSSSSQKKTLSRFSNSRVSDVV 331
           SVLEPN +  TNALQ S   STPKQ KEN+G   +CT TSSSS KK  SR S S V+++V
Sbjct: 250 SVLEPNTDFSTNALQPSEALSTPKQQKENKGFPQNCTETSSSSHKKPPSRLSGSCVTELV 309

Query: 332 SPPVLKQVKNKVQHEKYINQLRCREARRMAASKRTKKTITGKMMGEGSSILKKDAVKEAK 391
           SPPVLK+VKN+V HEKYINQLRCRE+RR A + +         + EG+SI K+D V  AK
Sbjct: 310 SPPVLKKVKNRVMHEKYINQLRCRESRRRADATK---------IIEGTSIQKRDVVNAAK 360

Query: 392 VAL 394
           VAL
Sbjct: 361 VAL 363