Miyakogusa Predicted Gene

Lj2g3v1457490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1457490.1 tr|D2V8Z4|D2V8Z4_NAEGR Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_31998 PE=4 SV=1,42.7,2e-16,23S RRNA
METHYLTRANSFERASE,NULL; RNA METHYLTRANSFERASE,NULL; seg,NULL; no
description,NULL,CUFF.37160.1
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15760.1                                                       284   4e-77

>Glyma17g15760.1 
          Length = 787

 Score =  284 bits (727), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 141/192 (73%), Positives = 153/192 (79%)

Query: 1   MEQVLKFLNDVREDLRCSMAKDVVTLRNETLKSYGDTNCMKNVSGDTEGIVLKDMSSDFQ 60
           MEQVLKFLND REDLRCSMAKDVVT+RNETL   GD NC++N+SG  EG +LKDMSSDFQ
Sbjct: 518 MEQVLKFLNDAREDLRCSMAKDVVTIRNETLNFNGDKNCIENLSGGIEGTMLKDMSSDFQ 577

Query: 61  KKVTLAKHNKGDNEAGFLYSNDETYRKMAEIEXXXXXXXXXXXXXXXXXXXXXASRQNCI 120
           KKVT  KH+KG NEAGFLY NDETY+K+AEIE                     ASRQN I
Sbjct: 578 KKVTFTKHDKGGNEAGFLYGNDETYKKLAEIERDDLLLDQLLQSRRSSLDQQKASRQNFI 637

Query: 121 LAASLLDRIPNLAGLARSCEVFGASGLAIADKNIISDKQFQLISVTAEKWVPIIELPVDS 180
           L ASLLDRIPNLAGLAR+CEVF ASGLAIAD  II+DKQFQLISVTAEKWVPIIE+PVDS
Sbjct: 638 LVASLLDRIPNLAGLARTCEVFRASGLAIADTKIINDKQFQLISVTAEKWVPIIEVPVDS 697

Query: 181 IKAYLQKKKREG 192
           IK YLQKKK+EG
Sbjct: 698 IKIYLQKKKKEG 709