Miyakogusa Predicted Gene

Lj2g3v1455180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1455180.1 tr|A9U6F5|A9U6F5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_103200,46.79,1e-17,seg,NULL;
coiled-coil,NULL,CUFF.37127.1
         (587 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g33260.1                                                       456   e-128
Glyma01g02660.2                                                       447   e-125
Glyma01g02660.1                                                       447   e-125
Glyma01g10200.1                                                       154   2e-37
Glyma01g29020.1                                                        85   2e-16

>Glyma09g33260.1 
          Length = 564

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/444 (56%), Positives = 296/444 (66%), Gaps = 42/444 (9%)

Query: 1   MALLGDDGRGYELARKLESCGVWRTWLGDSTYSNFAPFLSSPSAWDSFISTDPSNSRAHI 60
           MALLG+ GRGYELARKL++CGVWRTWLGD+TY+NFAPFLSSPSAWDSFI+     S  HI
Sbjct: 1   MALLGEGGRGYELARKLDTCGVWRTWLGDATYANFAPFLSSPSAWDSFIT-----STTHI 55

Query: 61  HLQLRVRALLFDKXXXXXXXXXXXXXXXL-----LNPSFLRLHPDDLYFTLDQPPPKNQS 115
            LQLRVRALLFDK               +     LNP +L+LH DD+YFTLD    KNQS
Sbjct: 56  PLQLRVRALLFDKATVSLSLNPNPNPNPISYLQRLNPIYLQLHADDVYFTLD-ADSKNQS 114

Query: 116 K-------AYRNDDLPETWYTQVMESYKANKKLLAGDRESPKRSPVEMASYVKYTANQKK 168
           K        Y    LPETWY QV+E YKANK L++G+     RSP +MASY+ Y  N KK
Sbjct: 115 KPSSSTGSRYVESQLPETWYNQVIEKYKANKNLVSGE----SRSPADMASYITYVTNHKK 170

Query: 169 RRLAFREGNHAADHASTMQPXXXXXXXXXXXXXXXXESVFPEVTFMWNCVPESALPMSNR 228
           RR+AF+E     DHA  +QP                 +VFPE+ +  NCVP+SALP+S+R
Sbjct: 171 RRVAFKE--DVTDHA--LQPNGGGSFVADDDC-----AVFPEIAYALNCVPDSALPLSDR 221

Query: 229 VEINP-QKMKLYSSILDTLPPLM-TRNPAMIERLGIRPEIISAEHGGPL---KFRPQWTG 283
           VE +  QK+K+ S +LDTLPP+  TR+  M+ERLG+RPE  S EHGG L   KF  +  G
Sbjct: 222 VESSSNQKVKVLS-VLDTLPPIAATRSSVMMERLGVRPEHGSVEHGGGLSRGKFGAEGNG 280

Query: 284 RVLSPEQGTKLSQKVVARILLGVGFEASMEGPVEYFAEVMSKRIVKIGTNLKVLTDSYKK 343
           +V+ PEQ  KLSQK VARILLGVGFE +MEG VE F+EV+S RI KIGTNL+VL DSYKK
Sbjct: 281 KVIGPEQAAKLSQKAVARILLGVGFEGAMEGSVEDFSEVLSGRICKIGTNLRVLADSYKK 340

Query: 344 QCSAIELLKMLLKTVGFSNFAPLVDVVKDGSKNIXXXXXXXXXXXXXXXXXXXXXXXRLP 403
           QCSAIELLKMLLKTVGFSNFAPLVDVVKDGSKN                        RLP
Sbjct: 341 QCSAIELLKMLLKTVGFSNFAPLVDVVKDGSKNNVHQSQQQVHGMQPQLQQQQQSSLRLP 400

Query: 404 REVQMR-----QMQQFLHSRNLAM 422
           ++VQM+     QMQQ +HS+N+A 
Sbjct: 401 QQVQMQRQMHPQMQQMIHSQNMAF 424



 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/110 (65%), Positives = 83/110 (75%), Gaps = 3/110 (2%)

Query: 480 DIDKERPLVQVKIENQTDLPVDGNSFNTRHPXXXXXXXXX--XXXSSFHPQSSNQFRQMA 537
           DIDKERP+VQVKIENQ DLP+DGN+F +RHP              S+FHPQS  QFRQM 
Sbjct: 456 DIDKERPVVQVKIENQ-DLPLDGNAFTSRHPQMQQFRQQQQIAAMSNFHPQSGTQFRQMG 514

Query: 538 NLQIPAMQSPNIGMVRAQPVKVEGFQELMGSPSSTKLDSEENRLTSPSSK 587
           +LQIP++QSPNI MVRA PVKVEGF ELMG  S++K D EENRLTSP+ K
Sbjct: 515 SLQIPSIQSPNISMVRAPPVKVEGFSELMGGDSTSKHDLEENRLTSPNGK 564


>Glyma01g02660.2 
          Length = 582

 Score =  447 bits (1150), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/457 (53%), Positives = 291/457 (63%), Gaps = 51/457 (11%)

Query: 1   MALLGDDGRGYELARKLESCGVWRTWLGDSTYSNFAPFLSSPSAWDSFISTDPSNSRAHI 60
           MA+LG+DGRGYELARKL++CGVWRTWLGD+TY+NFAPFLSSPSAWDSFI+     S  HI
Sbjct: 1   MAMLGEDGRGYELARKLDTCGVWRTWLGDATYANFAPFLSSPSAWDSFIT-----STTHI 55

Query: 61  HLQLRVRALLFDKXXXXXXXXXX-XXXXXLLNPSFLRLHPDDLYFTLDQP---------- 109
            LQLRVRALLFDK                 LNPS+L+LH DD+YFTLD            
Sbjct: 56  PLQLRVRALLFDKATASLSPNPNPSLSIQRLNPSYLQLHADDIYFTLDADSKVLQTLPLH 115

Query: 110 ------------PPKNQSKAYRNDDLPETWYTQVMESYKANKKLLAGDRESPKRSPVEMA 157
                       P  +    Y   +LPETWY  V+E YKANK L++G+     RSP +MA
Sbjct: 116 HSLSIHSPYLHFPSSSTGSRYVESELPETWYNLVIEKYKANKNLVSGE----SRSPADMA 171

Query: 158 SYVKYTANQKKRRLAFREG-NHAADHASTMQPXXXXXXXXXXXXXXXXESVFPEVTFMWN 216
           SY+ Y  N KKRR+AF+E  N   DHA  +QP                  VFPE+ +  N
Sbjct: 172 SYINYVTNHKKRRVAFKEDVNSVTDHA--LQPNGGGGLVADDD-----SPVFPEIAYALN 224

Query: 217 CVPESALPMSNRVEINPQKMKLYS--SILDTLPPLM-TRNPAMIERLGIRPEIISAEHGG 273
           CVP+SALP+S RVE N    K+    S+LDTLPP+  TR+  M+ERLG+RP+I S EHGG
Sbjct: 225 CVPDSALPLSERVENNSSNQKVVKVFSVLDTLPPIAATRSSVMMERLGVRPDIGSVEHGG 284

Query: 274 PL---KFRPQWTGRVLSPEQGTKLSQKVVARILLGVGFEASMEGPVEYFAEVMSKRIVKI 330
            +   KF  +  G+V+ PEQ  KLSQK VARILLGVGFE +MEG VE F+EV+SKRI KI
Sbjct: 285 GVSSGKFGAEGNGKVIGPEQAAKLSQKAVARILLGVGFEGAMEGSVEDFSEVLSKRISKI 344

Query: 331 GTNLKVLTDSYKKQCSAIELLKMLLKTVGFSNFAPLVDVVKDGSKNIXXXXXXXXXXXXX 390
           G+NL+VL DSYKKQCSAIELLKMLLKTVGFSNF PLVDVVKDGSKN              
Sbjct: 345 GSNLRVLADSYKKQCSAIELLKMLLKTVGFSNFTPLVDVVKDGSKNNVQQSQQQIHGMQP 404

Query: 391 XXXXXXXXXXRLPREVQMR-----QMQQFLHSRNLAM 422
                     RLP+++QM+     QMQQ +HS+N+A 
Sbjct: 405 QLQQQQQSSLRLPQQLQMQRQMHPQMQQMIHSQNMAF 441



 Score =  135 bits (340), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/115 (62%), Positives = 82/115 (71%), Gaps = 7/115 (6%)

Query: 479 MDIDKERPLVQVKIENQTDLPVDGN-SFNTRHPXXXXXXXXX-----XXXSSFHPQSSNQ 532
           MDIDKERPLVQVKIENQ DLP+DGN +F +RHP                 S+FHPQS  Q
Sbjct: 469 MDIDKERPLVQVKIENQ-DLPLDGNNAFTSRHPQIQQFRQQQQQQQIAAMSNFHPQSGTQ 527

Query: 533 FRQMANLQIPAMQSPNIGMVRAQPVKVEGFQELMGSPSSTKLDSEENRLTSPSSK 587
           FR M +LQIP++QSPN  MVRA PVKVEGF ELMG  S++K D EENRLTSP+ K
Sbjct: 528 FRHMGSLQIPSIQSPNTSMVRAPPVKVEGFSELMGGDSTSKHDLEENRLTSPNGK 582


>Glyma01g02660.1 
          Length = 584

 Score =  447 bits (1150), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/457 (53%), Positives = 291/457 (63%), Gaps = 51/457 (11%)

Query: 1   MALLGDDGRGYELARKLESCGVWRTWLGDSTYSNFAPFLSSPSAWDSFISTDPSNSRAHI 60
           MA+LG+DGRGYELARKL++CGVWRTWLGD+TY+NFAPFLSSPSAWDSFI+     S  HI
Sbjct: 1   MAMLGEDGRGYELARKLDTCGVWRTWLGDATYANFAPFLSSPSAWDSFIT-----STTHI 55

Query: 61  HLQLRVRALLFDKXXXXXXXXXX-XXXXXLLNPSFLRLHPDDLYFTLDQP---------- 109
            LQLRVRALLFDK                 LNPS+L+LH DD+YFTLD            
Sbjct: 56  PLQLRVRALLFDKATASLSPNPNPSLSIQRLNPSYLQLHADDIYFTLDADSKVLQTLPLH 115

Query: 110 ------------PPKNQSKAYRNDDLPETWYTQVMESYKANKKLLAGDRESPKRSPVEMA 157
                       P  +    Y   +LPETWY  V+E YKANK L++G+     RSP +MA
Sbjct: 116 HSLSIHSPYLHFPSSSTGSRYVESELPETWYNLVIEKYKANKNLVSGE----SRSPADMA 171

Query: 158 SYVKYTANQKKRRLAFREG-NHAADHASTMQPXXXXXXXXXXXXXXXXESVFPEVTFMWN 216
           SY+ Y  N KKRR+AF+E  N   DHA  +QP                  VFPE+ +  N
Sbjct: 172 SYINYVTNHKKRRVAFKEDVNSVTDHA--LQPNGGGGLVADDD-----SPVFPEIAYALN 224

Query: 217 CVPESALPMSNRVEINPQKMKLYS--SILDTLPPLM-TRNPAMIERLGIRPEIISAEHGG 273
           CVP+SALP+S RVE N    K+    S+LDTLPP+  TR+  M+ERLG+RP+I S EHGG
Sbjct: 225 CVPDSALPLSERVENNSSNQKVVKVFSVLDTLPPIAATRSSVMMERLGVRPDIGSVEHGG 284

Query: 274 PL---KFRPQWTGRVLSPEQGTKLSQKVVARILLGVGFEASMEGPVEYFAEVMSKRIVKI 330
            +   KF  +  G+V+ PEQ  KLSQK VARILLGVGFE +MEG VE F+EV+SKRI KI
Sbjct: 285 GVSSGKFGAEGNGKVIGPEQAAKLSQKAVARILLGVGFEGAMEGSVEDFSEVLSKRISKI 344

Query: 331 GTNLKVLTDSYKKQCSAIELLKMLLKTVGFSNFAPLVDVVKDGSKNIXXXXXXXXXXXXX 390
           G+NL+VL DSYKKQCSAIELLKMLLKTVGFSNF PLVDVVKDGSKN              
Sbjct: 345 GSNLRVLADSYKKQCSAIELLKMLLKTVGFSNFTPLVDVVKDGSKNNVQQSQQQIHGMQP 404

Query: 391 XXXXXXXXXXRLPREVQMR-----QMQQFLHSRNLAM 422
                     RLP+++QM+     QMQQ +HS+N+A 
Sbjct: 405 QLQQQQQSSLRLPQQLQMQRQMHPQMQQMIHSQNMAF 441



 Score =  133 bits (335), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 81/113 (71%), Gaps = 7/113 (6%)

Query: 479 MDIDKERPLVQVKIENQTDLPVDGN-SFNTRHPXXXXXXXXX-----XXXSSFHPQSSNQ 532
           MDIDKERPLVQVKIENQ DLP+DGN +F +RHP                 S+FHPQS  Q
Sbjct: 469 MDIDKERPLVQVKIENQ-DLPLDGNNAFTSRHPQIQQFRQQQQQQQIAAMSNFHPQSGTQ 527

Query: 533 FRQMANLQIPAMQSPNIGMVRAQPVKVEGFQELMGSPSSTKLDSEENRLTSPS 585
           FR M +LQIP++QSPN  MVRA PVKVEGF ELMG  S++K D EENRLTSP+
Sbjct: 528 FRHMGSLQIPSIQSPNTSMVRAPPVKVEGFSELMGGDSTSKHDLEENRLTSPN 580


>Glyma01g10200.1 
          Length = 329

 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/155 (57%), Positives = 112/155 (72%), Gaps = 11/155 (7%)

Query: 205 ESVFPEVTFMWNCVPESALPMSNRVEINP-QKMKLYSSILDTLPPL-MTRNPAMIERLGI 262
           +++FPE+ +  N VP+SALP+S+RVE +  QK+K+   +LDTLPP+  TR+  M+ER G 
Sbjct: 87  KTIFPEIVYTLNYVPDSALPLSDRVESSSNQKVKVLG-VLDTLPPIATTRSSIMMERHGE 145

Query: 263 RPEIISAEHGGPLKFRPQWTGRVLSPEQGTKLSQKVVARILLGVGFEASMEGPVEYFAEV 322
              +      G L+ R     +V+ PEQ  KLSQKVVARILLGVGFE +MEG VE F+EV
Sbjct: 146 GCLV------GNLELRGN--AKVIGPEQVVKLSQKVVARILLGVGFEGAMEGSVEDFSEV 197

Query: 323 MSKRIVKIGTNLKVLTDSYKKQCSAIELLKMLLKT 357
           +S RI K  TNL+VL DSYKKQCSAIELLKMLLKT
Sbjct: 198 LSGRICKTRTNLRVLADSYKKQCSAIELLKMLLKT 232


>Glyma01g29020.1 
          Length = 175

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 15/128 (11%)

Query: 211 VTFMWNCVPESALPMSNRVEINP-QKMKLYSSILDTLPPLMT-RNPAMIERLGIRPEIIS 268
           + +  N VP+SAL +S+RVE +  QK+K+ S +LDTLPP+   R+  M+ER G+RPE  S
Sbjct: 1   IAYALNYVPDSALSLSDRVESSSNQKVKVLS-VLDTLPPIAAIRSSVMMERHGVRPEHGS 59

Query: 269 AEHGGPL---KFRPQWTGRVLSPEQGTKLSQKVVARILLGVGFEASMEGPVEYFAEVMSK 325
            EHGG L   KFR +  G         KLSQK VARILLGVGF   M   V     +++ 
Sbjct: 60  VEHGGGLSRGKFRVEGNG---------KLSQKAVARILLGVGFPCLMSLLVHGLVSLVTL 110

Query: 326 RIVKIGTN 333
             V + T 
Sbjct: 111 LSVALCTT 118