Miyakogusa Predicted Gene
- Lj2g3v1436930.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1436930.2 tr|G7KHW4|G7KHW4_MEDTR Cyclic nucleotide gated
channel OS=Medicago truncatula GN=MTR_6g072050 PE=4
S,70,3e-19,Voltage-gated potassium channels,NULL; seg,NULL; CYCLIC
NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE AND L,CUFF.37064.2
(92 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g34370.1 118 1e-27
Glyma09g29860.1 115 8e-27
Glyma09g29870.1 115 1e-26
Glyma16g34390.1 111 2e-25
Glyma16g34380.1 107 2e-24
Glyma09g29850.1 102 1e-22
Glyma09g29880.1 101 2e-22
Glyma16g34420.1 96 9e-21
Glyma04g41610.2 56 1e-08
Glyma04g41610.1 56 1e-08
Glyma14g31940.1 55 2e-08
Glyma06g13200.1 55 2e-08
Glyma06g08170.1 54 5e-08
Glyma17g08120.1 53 9e-08
Glyma02g36560.1 53 9e-08
Glyma06g30030.1 52 1e-07
Glyma12g23890.1 52 2e-07
Glyma08g23460.1 51 2e-07
Glyma06g30030.2 50 4e-07
Glyma04g24950.1 50 4e-07
Glyma04g24950.2 50 4e-07
Glyma07g02560.1 50 5e-07
Glyma18g49890.1 47 3e-06
Glyma12g08160.1 47 5e-06
Glyma08g26340.1 47 5e-06
Glyma16g02850.1 46 9e-06
>Glyma16g34370.1
Length = 772
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 60/76 (78%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGNQ PSYFVWEVLFTM+ NIQNFLQALGRR+LEMQLRGRD
Sbjct: 478 QQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRD 537
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP DLRR
Sbjct: 538 VEQWMSHRRLPEDLRR 553
>Glyma09g29860.1
Length = 770
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 59/76 (77%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGNQ PSYF WEVLFTM+ NIQNFLQALGRR+LEMQLRGRD
Sbjct: 476 QQISTLAGNQTPSYFEWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRD 535
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP DLRR
Sbjct: 536 VEQWMSHRRLPEDLRR 551
>Glyma09g29870.1
Length = 787
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 59/76 (77%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYFVWEVLFTM+ NIQNFLQALGRRKLEMQLRGRD
Sbjct: 498 QQISTLAGNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRD 557
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP DLRR
Sbjct: 558 VEQWMSHRRLPEDLRR 573
>Glyma16g34390.1
Length = 758
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 57/74 (77%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYFVWEVLFTM+ NIQNFLQALGRRKLEMQLRGRD
Sbjct: 469 QQISTLAGNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRD 528
Query: 69 VEQWMSHRRLPVDL 82
VEQWMSHRRLP DL
Sbjct: 529 VEQWMSHRRLPEDL 542
>Glyma16g34380.1
Length = 701
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 57/77 (74%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQIST+AGNQ PS FVWEVLFTM+ NIQNFLQ LGRR+LEMQLR R
Sbjct: 431 LQQISTLAGNQTPSDFVWEVLFTMAIVGLGLFLFALLIGNIQNFLQGLGRRRLEMQLRSR 490
Query: 68 DVEQWMSHRRLPVDLRR 84
DVEQWMSHRRLP LRR
Sbjct: 491 DVEQWMSHRRLPEYLRR 507
>Glyma09g29850.1
Length = 719
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 55/76 (72%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AG+ PSYF EVLFTM+ NI NFLQ LGRR+LEMQLRGRD
Sbjct: 453 QQISTLAGSLTPSYFWGEVLFTMAIIGLGLLLFAVLVGNIHNFLQGLGRRRLEMQLRGRD 512
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP D+RR
Sbjct: 513 VEQWMSHRRLPEDIRR 528
>Glyma09g29880.1
Length = 781
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 55/76 (72%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSY+VWEV+FTM+ NIQNFLQALGRR+LEM LR D
Sbjct: 483 QQISTLAGNLTPSYYVWEVIFTMAIIGSGLLLFALLIGNIQNFLQALGRRRLEMSLRRCD 542
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRL DLRR
Sbjct: 543 VEQWMSHRRLAEDLRR 558
>Glyma16g34420.1
Length = 713
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 52/76 (68%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+A N PSYFVWEV+FTM NIQNFLQAL RR+LEM LR RD
Sbjct: 458 QQISTLASNLTPSYFVWEVIFTMIIIGSGLLLFALLIGNIQNFLQALERRRLEMTLRRRD 517
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHR L DLRR
Sbjct: 518 VEQWMSHRHLAEDLRR 533
>Glyma04g41610.2
Length = 715
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S +VWE+ F + N+Q +LQ+ R EM+++ R
Sbjct: 363 LRNLSSLGQNLATSTYVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRR 422
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWMSHR LP LR
Sbjct: 423 DAEQWMSHRLLPDSLR 438
>Glyma04g41610.1
Length = 715
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S +VWE+ F + N+Q +LQ+ R EM+++ R
Sbjct: 363 LRNLSSLGQNLATSTYVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRR 422
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWMSHR LP LR
Sbjct: 423 DAEQWMSHRLLPDSLR 438
>Glyma14g31940.1
Length = 718
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S +VWE+ F + N+Q +LQ+ R EM+++ R
Sbjct: 366 LKNLSSLGQNLATSTYVWEISFAVFISVSGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRR 425
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWMSHR LP LR
Sbjct: 426 DAEQWMSHRLLPDGLR 441
>Glyma06g13200.1
Length = 715
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S +VWE+ F + N+Q +LQ+ R EM+++ R
Sbjct: 363 LRNLSSLGQNLATSTYVWEISFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRR 422
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWMSHR LP LR
Sbjct: 423 DAEQWMSHRLLPDSLR 438
>Glyma06g08170.1
Length = 696
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +S+ + S FVWE F + N+Q +LQ++ R E +L+ R
Sbjct: 332 LQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRR 391
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WMSHR+LP +LR
Sbjct: 392 DTEEWMSHRQLPQNLR 407
>Glyma17g08120.1
Length = 728
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 380 LQNLSTLGQGLQTSTYPGEVIFSIALAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRR 439
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP DLR
Sbjct: 440 DSEQWMHHRLLPQDLR 455
>Glyma02g36560.1
Length = 728
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 380 LQNLSTLGQGLQTSTYPGEVIFSIALAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRR 439
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP DLR
Sbjct: 440 DSEQWMHHRLLPQDLR 455
>Glyma06g30030.1
Length = 713
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQ+S+ N S F+ E F + N+Q +LQ++ R E +L+ R
Sbjct: 355 LQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKQR 414
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP DLR
Sbjct: 415 DTEEWMRHRQLPEDLR 430
>Glyma12g23890.1
Length = 732
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 382 LQNLSTLGQGLETSTYTGEVVFSIALAIAGLILFALLIGNMQTYLQSLTIRLEEMRVKRR 441
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 442 DSEQWMHHRLLPQELR 457
>Glyma08g23460.1
Length = 752
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ + S + EVLF++ N+Q +LQ++ R EM+++ R
Sbjct: 389 LQNLSTLGQGLLTSTYPKEVLFSIVIAIMGLILFALLIGNMQTYLQSMSVRLEEMRIKRR 448
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 449 DSEQWMHHRLLPPELR 464
>Glyma06g30030.2
Length = 684
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQ+S+ N S F+ E F + N+Q +LQ++ R E +L+ R
Sbjct: 326 LQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKQR 385
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP DLR
Sbjct: 386 DTEEWMRHRQLPEDLR 401
>Glyma04g24950.1
Length = 713
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQ+S+ N S F+ E F + N+Q +LQ++ R E +L+ R
Sbjct: 355 LQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKRR 414
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP DLR
Sbjct: 415 DTEEWMRHRQLPEDLR 430
>Glyma04g24950.2
Length = 553
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQ+S+ N S F+ E F + N+Q +LQ++ R E +L+ R
Sbjct: 195 LQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKRR 254
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP DLR
Sbjct: 255 DTEEWMRHRQLPEDLR 270
>Glyma07g02560.1
Length = 752
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ + S + EV+F++ N+Q +LQ++ R EM+++ R
Sbjct: 389 LQNLSTLGQGLLTSTYPGEVMFSIVIAIMGLILFALLIGNMQTYLQSMSVRLEEMRIQRR 448
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 449 DSEQWMHHRLLPPELR 464
>Glyma18g49890.1
Length = 688
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+ +ST + P+ EV+F++ NIQ FL A+ +K +MQLR R
Sbjct: 369 LMTLSTFGNDLEPTSHWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCR 428
Query: 68 DVEQWMSHRRLPVDLR 83
D+E WM R+LP LR
Sbjct: 429 DMEWWMRRRQLPSRLR 444
>Glyma12g08160.1
Length = 655
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ + S FV E++F + N+Q +LQ+ R E ++R
Sbjct: 317 LRNLSSLGQGLLTSTFVGEIMFAIVVATLGLVLFGLLIGNMQTYLQSTTVRLEEWRVRRT 376
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWM HR+LP +LR+
Sbjct: 377 DTEQWMHHRQLPPELRQ 393
>Glyma08g26340.1
Length = 718
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+ +ST + P+ EV+F++ NIQ FL A+ +K +MQLR R
Sbjct: 407 LMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCR 466
Query: 68 DVEQWMSHRRLPVDLRR 84
D+E WM R+LP LR+
Sbjct: 467 DMEWWMRRRQLPSRLRQ 483
>Glyma16g02850.1
Length = 632
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ S +V E++F + N+Q +LQ+ R EM+++ R
Sbjct: 284 LRSVSSVGQGLETSSYVGEIIFAILIAVFGLVLFASLIANMQKYLQSTSVRVEEMRVKRR 343
Query: 68 DVEQWMSHRRLPVDLRRYKI 87
D E WMSHR LP DL + +I
Sbjct: 344 DAELWMSHRMLP-DLLKERI 362