Miyakogusa Predicted Gene
- Lj2g3v1415220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1415220.1 Non Chatacterized Hit- tr|B9FG21|B9FG21_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,35.09,0.00005,Ubie_methyltran,UbiE/COQ5 methyltransferase; no
description,NULL; S-adenosyl-L-methionine-dependent ,CUFF.37000.1
(244 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g04200.1 414 e-116
Glyma01g03430.1 409 e-114
Glyma08g22890.1 96 4e-20
Glyma07g03210.1 92 4e-19
Glyma07g03210.2 92 4e-19
Glyma15g24000.1 60 3e-09
Glyma06g11230.1 55 5e-08
Glyma12g22690.1 54 1e-07
Glyma06g38480.1 54 1e-07
Glyma09g12390.1 52 4e-07
Glyma09g12390.2 52 8e-07
Glyma04g02270.1 49 4e-06
>Glyma02g04200.1
Length = 252
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/245 (82%), Positives = 221/245 (90%), Gaps = 5/245 (2%)
Query: 5 SPCCNFRPI---CAN--ERQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWSGAKMGHR 59
S +FRP CAN ER+ALF+RIAPVYDNLNDLLSLGQHRIWKRMAVSW+GAKMG R
Sbjct: 8 STSSSFRPTLIRCANSNERRALFSRIAPVYDNLNDLLSLGQHRIWKRMAVSWTGAKMGDR 67
Query: 60 VLDVCCGSGDLALLLSEKVGSNGKVIGLDFSEEQLSVAASRQNSRTKNCFTNIEWVEGDA 119
VLDVCCGSGDL+ LLS++VGS+GKVIGLDFS++QL A+SRQ S +KNCFTNIEWVEGDA
Sbjct: 68 VLDVCCGSGDLSFLLSDQVGSHGKVIGLDFSKDQLLFASSRQESLSKNCFTNIEWVEGDA 127
Query: 120 LDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGSRVSILDFNKSNELLTSSITE 179
LDLPF DGWFDAITMGYGLRNVVDK+KAMQEI RVLK GS VSILDFNKSNELLTS+ TE
Sbjct: 128 LDLPFSDGWFDAITMGYGLRNVVDKQKAMQEIFRVLKTGSTVSILDFNKSNELLTSAFTE 187
Query: 180 LLIDNIVVPVASVYGLSEDYRYLKSSIREFLTGKELEELALEVGFSTARHYEISGGLMGC 239
+IDNIVVPVA+ YGLSE+YRYLKSSIREFLTGKELE+LALEVGFS ARHYEI GGLMGC
Sbjct: 188 WMIDNIVVPVATGYGLSEEYRYLKSSIREFLTGKELEKLALEVGFSAARHYEIGGGLMGC 247
Query: 240 LVAKR 244
LVAKR
Sbjct: 248 LVAKR 252
>Glyma01g03430.1
Length = 253
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/245 (82%), Positives = 216/245 (88%), Gaps = 5/245 (2%)
Query: 5 SPCCNFRPI-----CANERQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWSGAKMGHR 59
S FRP ANERQALF+RIAPVYDNLNDLLSLGQHRIWKRMAVSW+GAKMG
Sbjct: 9 STSSTFRPTLIRCASANERQALFSRIAPVYDNLNDLLSLGQHRIWKRMAVSWTGAKMGDC 68
Query: 60 VLDVCCGSGDLALLLSEKVGSNGKVIGLDFSEEQLSVAASRQNSRTKNCFTNIEWVEGDA 119
VLDVCCGSGDL+ LLS+KVGS+GKVIGLDFS++QLS A SRQ S +KNCF NIEWVEGDA
Sbjct: 69 VLDVCCGSGDLSFLLSDKVGSHGKVIGLDFSKDQLSFALSRQQSLSKNCFMNIEWVEGDA 128
Query: 120 LDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGSRVSILDFNKSNELLTSSITE 179
LDLPF DGWFDAITMGYGLRNVVDK+KAMQEI RVLK GS VSILDFNKSNELLTS++TE
Sbjct: 129 LDLPFSDGWFDAITMGYGLRNVVDKQKAMQEIFRVLKTGSTVSILDFNKSNELLTSAVTE 188
Query: 180 LLIDNIVVPVASVYGLSEDYRYLKSSIREFLTGKELEELALEVGFSTARHYEISGGLMGC 239
+IDNIVVPVA+ YGLSE+YRYLK SIREFLTGKELE+LAL VGFS ARHYEI GGLMGC
Sbjct: 189 WMIDNIVVPVATGYGLSEEYRYLKRSIREFLTGKELEKLALGVGFSAARHYEIGGGLMGC 248
Query: 240 LVAKR 244
LVAKR
Sbjct: 249 LVAKR 253
>Glyma08g22890.1
Length = 290
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 21 LFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGS 80
+F +A YD +NDL+S G HR+WK VS G + LDV G+GD+A + E +
Sbjct: 49 VFTSVASSYDLMNDLMSAGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILENI-H 107
Query: 81 NGKVIGL-----------------DFSEEQLSVAASRQNSRTKNCFTNIEWVEGDALDLP 123
K+ GL D + + L+V R + + ++ WVEG+A L
Sbjct: 108 KVKLRGLRGAFQDTLEAETQIYVCDINPKMLNVGKQRASEKGFGEDGSLVWVEGNAESLS 167
Query: 124 FDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGSRVSILDFNKSNELLTSSITELLID 183
F + D T+ +G+RNV K + E RVLK G R L+ + + + +
Sbjct: 168 FQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKPGGRFLCLELSHVGIPIFKDLYDYYSF 227
Query: 184 NIVVPVAS-VYGLSEDYRYLKSSIREFLTGKELEELALEVGFSTARHYEISGGLM 237
+++ + V G + Y+YL SIR F + ++ + + GF + + GG++
Sbjct: 228 SVIPYMGELVAGDRQSYQYLVESIRRFPSQEKFASMIADAGFQKVEYENLVGGVV 282
>Glyma07g03210.1
Length = 290
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 10 FRPICANERQAL----FNRIAPVYDNLNDLLSLGQHRIWKRMAVSWSGAKMGHRVLDVCC 65
F+ + +E+ + F +A YD +NDL+S+G HR+WK VS G + LDV
Sbjct: 34 FKQVNEDEKARMVGDVFTSVASSYDLMNDLMSVGLHRLWKDRLVSKLNPFPGMKHLDVAG 93
Query: 66 GSGDLALLLSEKVGSNGKVIGL-----------------DFSEEQLSVAASRQNSRTKNC 108
G+GD+A + E + K+ GL D + + L+V R + +
Sbjct: 94 GTGDVAFRILESI-HKVKLRGLRGAFQDTLEAETQIYVCDINPKMLNVGKRRASEKGFGE 152
Query: 109 FTNIEWVEGDALDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGSRVSILDFNK 168
++ WVEG+A L F + D T+ +G+RNV K + E RVLK G R L+ +
Sbjct: 153 DGSLVWVEGNAESLSFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKPGGRFLCLELSH 212
Query: 169 SNELLTSSITELLIDNIVVPVAS-VYGLSEDYRYLKSSIREFLTGKELEELALEVGFSTA 227
+ + + +++ + V E Y+YL SIR F + ++ + + GF
Sbjct: 213 VGIPVFKDLYDYYSFSVIPYMGELVASDRESYQYLVESIRRFPSQEKFASMIADAGFQKV 272
Query: 228 RHYEISGGLMGC 239
+ + G++
Sbjct: 273 EYENLVAGVVAI 284
>Glyma07g03210.2
Length = 246
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 21 LFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGS 80
+F +A YD +NDL+S+G HR+WK VS G + LDV G+GD+A + E +
Sbjct: 5 VFTSVASSYDLMNDLMSVGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILESI-H 63
Query: 81 NGKVIGL-----------------DFSEEQLSVAASRQNSRTKNCFTNIEWVEGDALDLP 123
K+ GL D + + L+V R + + ++ WVEG+A L
Sbjct: 64 KVKLRGLRGAFQDTLEAETQIYVCDINPKMLNVGKRRASEKGFGEDGSLVWVEGNAESLS 123
Query: 124 FDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGSRVSILDFNKSNELLTSSITELLID 183
F + D T+ +G+RNV K + E RVLK G R L+ + + + +
Sbjct: 124 FQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKPGGRFLCLELSHVGIPVFKDLYDYYSF 183
Query: 184 NIVVPVAS-VYGLSEDYRYLKSSIREFLTGKELEELALEVGFSTARHYEISGGLM 237
+++ + V E Y+YL SIR F + ++ + + GF + + G++
Sbjct: 184 SVIPYMGELVASDRESYQYLVESIRRFPSQEKFASMIADAGFQKVEYENLVAGVV 238
>Glyma15g24000.1
Length = 341
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 20/180 (11%)
Query: 46 RMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGSNGKVIGLDFSEEQLSVAASRQNSRT 105
+MA + + G ++DV CGSG + + K G+ VI LDFSE L
Sbjct: 164 KMAQEYFESAKGGLIVDVSCGSGLFSRKFA-KSGAYSGVIALDFSENMLRQCYEFIKKDD 222
Query: 106 KNCFTNIEWVEGDALDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGSRVSILD 165
TNI V D LPF G DA+ G L A+ EI RVLK+G
Sbjct: 223 TLSTTNIALVRADVSRLPFPSGSVDAVHAGAALHCWPSPSNAVAEITRVLKSGG-----V 277
Query: 166 FNKSNELLTSSITELLIDNIVVPVASVYGLSEDYRYLKSSIREFLTGKELEELALEVGFS 225
F S L SS+T + + YG +LT +E+++L G +
Sbjct: 278 FVGSTFLRYSSLTPWFLRPFRERIPQGYG--------------YLTEEEIKDLCTSCGLT 323
>Glyma06g11230.1
Length = 445
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 28 VYDNLNDLLSLGQHRIWKRMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGSNGKVIGL 87
VYD + S + W ++A S +G VLD CG+G L + IG
Sbjct: 161 VYDAIAPHFSATRFAKWPKVAAFLSSLPLGSLVLDAGCGNGKYLGL-----NQDCFFIGC 215
Query: 88 DFSEEQLSVAASRQNSRTKNCFTNIEWVEGDALDLPFDDGWFDA---ITMGYGLRNVVDK 144
D S + + + R++ E + DA++LP+ G+ DA I + + L +
Sbjct: 216 DISPSLIKICSDREH----------EVLVADAVNLPYRTGFGDAAISIAVLHHLSTENRR 265
Query: 145 RKAMQEILRVLKAGSRVSILDF---NKSNELLT--SSITELLIDNIVVP 188
RKA++E++RV+K G RV I + + ++L+T + + E +D V P
Sbjct: 266 RKAIEELVRVVKKGGRVLITVWAVEQEDSKLITKWTPLNEKYVDEWVGP 314
>Glyma12g22690.1
Length = 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 35/167 (20%)
Query: 59 RVLDV-CCGSGDLALLLS---EKVGSNGKVIGLDFSEEQLSVAASRQNSRTKNCFTNIEW 114
+VLD+ CCG G L ++ +K GS+G+VIGL + + +AA+ + ++
Sbjct: 118 QVLDLGCCGRGILLNAVAARLKKEGSSGRVIGLS-GQNKTELAATLRAAK---------- 166
Query: 115 VEGDALDLPFDDGWFDAITMGYGLRNV----------VDKRKAMQEILRVLKAGSRVSIL 164
VEGDA LPF D FDA+ G + V ++ + + E++RVLK G +
Sbjct: 167 VEGDATTLPFLDDSFDAVVSGTFVHTVGWGHAADVAAAERGRVVAEVVRVLKEGGVGVVW 226
Query: 165 DFNKSNEL---LTSSITELLIDNIVV----PVASVYGLSE---DYRY 201
D E ++ +T ++ + VV P V+G E D+R+
Sbjct: 227 DLVHVPEYVRRMSERVTAFMVSSHVVSFRKPTHHVHGPPEVRLDWRF 273
>Glyma06g38480.1
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 38/185 (20%)
Query: 51 WSGAKMGHRVLDV-CCGSGDLALLLS---EKVGSNGKVIGLDFSEEQLSVAASRQNSRTK 106
WS + +VLD+ CCG G L ++ +K GS+G+VIGL + ++A+ + ++ +
Sbjct: 114 WSTVR---QVLDLGCCGRGILLNAVAARLKKEGSSGRVIGLS-GPNKAKLSATLRAAKVE 169
Query: 107 NCFTNIEWVEGDALDLPFDDGWFDAITMGYGLRNV----------VDKRKAMQEILRVLK 156
+ GDA LPF DG FDA+ G + V ++ +A+ E++RVLK
Sbjct: 170 GVEEYVTCRTGDATKLPFTDGSFDAVVSGTFVHTVGRGSTPDVATAERGRAVAEVVRVLK 229
Query: 157 AGSRVSILDFNKSNEL-------------LTSSITELLIDNIVV----PVASVYGLSE-- 197
G + D E ++ +T ++ + VV P V+G E
Sbjct: 230 EGGVGVVWDLVHVPEYVRRLQDMKMEDIRVSERVTAFMVSSHVVSFKKPTHHVHGPPEVR 289
Query: 198 -DYRY 201
D+R+
Sbjct: 290 LDWRF 294
>Glyma09g12390.1
Length = 341
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 46 RMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGSNGKVIGLDFSEEQLSVAASRQNSRT 105
+MA + + G ++DV CGSG + + K G+ VI LDFSE L
Sbjct: 164 KMAQEYFESAEGGLLVDVSCGSGLFSRKFA-KSGTYSGVIALDFSENMLRQCYDFIEKDD 222
Query: 106 KNCFTNIEWVEGDALDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAG 158
NI V D LPF G DA+ G L A+ EI R LK G
Sbjct: 223 TLSTNNIALVRADVSRLPFSSGSVDAVHAGAALHCWPSPSNAVAEITRTLKNG 275
>Glyma09g12390.2
Length = 245
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 46 RMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGSNGKVIGLDFSEEQLSVAASRQNSRT 105
+MA + + G ++DV CGSG + + K G+ VI LDFSE L
Sbjct: 68 KMAQEYFESAEGGLLVDVSCGSGLFSRKFA-KSGTYSGVIALDFSENMLRQCYDFIEKDD 126
Query: 106 KNCFTNIEWVEGDALDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAG 158
NI V D LPF G DA+ G L A+ EI R LK G
Sbjct: 127 TLSTNNIALVRADVSRLPFSSGSVDAVHAGAALHCWPSPSNAVAEITRTLKNG 179
>Glyma04g02270.1
Length = 256
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 42 RIWKRMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGSNGKVIGLDFSEEQLSVAASRQ 101
R+ + MAV AK G+R+LDV CG G ++ S V+G+ +E Q++ A R
Sbjct: 109 RLHEEMAVDLIEAKPGNRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRA--RM 164
Query: 102 NSRTKNCFTNIEWVEGDALDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGS 159
+++ + E V G+ L +PF D FD + + EI RVLK G+
Sbjct: 165 HNKKAGLESLCEVVCGNFLKMPFPDNSFDGAYSIEATCHAPKLEEVYAEIFRVLKPGA 222