Miyakogusa Predicted Gene

Lj2g3v1414880.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1414880.2 Non Chatacterized Hit- tr|K3Y2U2|K3Y2U2_SETIT
Uncharacterized protein OS=Setaria italica GN=Si008523,31.9,8e-17,
,CUFF.36978.2
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma0430s00210.1                                                     312   2e-85
Glyma01g03660.1                                                       206   1e-53
Glyma02g04030.1                                                       181   6e-46

>Glyma0430s00210.1 
          Length = 310

 Score =  312 bits (800), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 144/189 (76%), Positives = 162/189 (85%)

Query: 33  KNVAIQLVAEDCDVLGSRYEKVFPANMCNDLSIPAANLERLMSGLEDYVLKHGNNLSDKC 92
           +NVAIQLVAEDCDV  SRYEKVF  N C  L + A+NLE L SG+EDYVLKHGNNLS+KC
Sbjct: 2   QNVAIQLVAEDCDVPESRYEKVFLTNECKKLPMSASNLELLKSGIEDYVLKHGNNLSNKC 61

Query: 93  NSCFPSWETLKVGSGVVCCTENRLHTELVMEAVIILSNISIQNTTCLREYGDKTEVLYFK 152
           NSCFPSWE  KVGSG  CCT+NRLH ELVMEA I++SNIS+QNTTC REYG+K EVLYFK
Sbjct: 62  NSCFPSWEQRKVGSGEACCTDNRLHIELVMEAAIVISNISMQNTTCFREYGNKQEVLYFK 121

Query: 153 DFSPCTMSQSSMKALKGIGWKRYGLHLGGIVEKDGFAILEWENLPSDTHIDIVLHSYHKQ 212
           DFSPCT+SQSS+KAL+ I WK YGL+LGGIVE+D   +LEWEN P+DTHIDIVLHSYHKQ
Sbjct: 122 DFSPCTISQSSVKALQSIDWKTYGLNLGGIVEQDDVTLLEWENFPTDTHIDIVLHSYHKQ 181

Query: 213 YPALDRPFL 221
           YPAL+R FL
Sbjct: 182 YPALNRSFL 190


>Glyma01g03660.1 
          Length = 268

 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 93/122 (76%), Positives = 106/122 (86%)

Query: 100 ETLKVGSGVVCCTENRLHTELVMEAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTM 159
           E  KVGSG  CC +NRL TELVMEAVI++SNIS+QNTTC REY +KTEVLYFKDFSPCT+
Sbjct: 1   EQRKVGSGEACCADNRLRTELVMEAVIVISNISMQNTTCFREYDNKTEVLYFKDFSPCTI 60

Query: 160 SQSSMKALKGIGWKRYGLHLGGIVEKDGFAILEWENLPSDTHIDIVLHSYHKQYPALDRP 219
           SQSS+KAL+ I WK YGL+LGGIVE+D   +LEWEN P+DTHIDIVLHSYHKQYPAL+R 
Sbjct: 61  SQSSVKALQSIDWKTYGLNLGGIVEQDDVTLLEWENFPTDTHIDIVLHSYHKQYPALNRS 120

Query: 220 FL 221
           FL
Sbjct: 121 FL 122


>Glyma02g04030.1 
          Length = 199

 Score =  181 bits (459), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 96/109 (88%)

Query: 100 ETLKVGSGVVCCTENRLHTELVMEAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTM 159
           E  KVGSG  CC +NRL TELVMEAVI++SNIS+QNTTC REY +KTEVLYFKDFSPCT+
Sbjct: 1   EQRKVGSGEACCADNRLRTELVMEAVIVISNISMQNTTCFREYDNKTEVLYFKDFSPCTI 60

Query: 160 SQSSMKALKGIGWKRYGLHLGGIVEKDGFAILEWENLPSDTHIDIVLHS 208
           SQSS+KAL+ I WK YGL+LGG+VE+DG  +L+WENLP+DTHIDI+LHS
Sbjct: 61  SQSSVKALQSIDWKTYGLNLGGVVEQDGVTLLQWENLPTDTHIDILLHS 109