Miyakogusa Predicted Gene

Lj2g3v1391610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1391610.1 tr|C1MSP2|C1MSP2_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_5776,47.42,1e-17,RRM,RNA recognition motif domain;
seg,NULL; no description,Nucleotide-binding, alpha-beta plait;
coi,CUFF.36966.1
         (660 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g03810.1                                                       341   2e-93
Glyma02g03900.1                                                       340   4e-93

>Glyma01g03810.1 
          Length = 927

 Score =  341 bits (874), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 183/317 (57%), Positives = 219/317 (69%), Gaps = 5/317 (1%)

Query: 122 RAYAPMPNGYAAPPQGTVXXXXXXXXXXXXXXMLRPVYPPRPHGALNVAPVSXXXXXXXX 181
           R +AP+PNGYAA P   V              M+RPV+P RP GA+N+  +S        
Sbjct: 130 RPFAPIPNGYAAAP--NVTPAGIPRYPPPYGTMVRPVFPARPPGAVNIPTISRPPVAGIP 187

Query: 182 XXXXXXXXXXXXXXXXSVTPAEKQQITVYI-RIAPTVENEFVLSLIQLCGNIKSWKRTQY 240
                           SVTPAEK Q TVYI +IAPTVENEF+LSL+QLCG IK+WKR Q 
Sbjct: 188 AVRPIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLCGTIKTWKRPQD 247

Query: 241 LSSGTPKSFGFYEFESAEGVLRAMRLLSKLNIDGQELVVNVDEAMKQYLERYVQRKTENS 300
           LS+GTP SFGFYEFESAEGVLRA+RLL+KLNIDGQEL VNV++AMK+ LE YV+ KTEN 
Sbjct: 248 LSTGTPTSFGFYEFESAEGVLRALRLLTKLNIDGQELKVNVNQAMKEILELYVKTKTENL 307

Query: 301 IKKEAQTAGDEKDDEGTKPSDATDAAKPDVDPSNKEDNDSGNKESHDVKNFGIVTDEDRE 360
             KE Q  G++  +EG +PS+A + AK D +PSNKE ++S NKESHDV NFGIVTDEDRE
Sbjct: 308 KNKETQEVGEK--NEGEQPSNANEDAKVDTEPSNKEASESSNKESHDVANFGIVTDEDRE 365

Query: 361 ADRDALVKIANMIEERLMTRXXXXXXXXXTVDGSVSSVQEQPAKTRDGESDVDTKKNETG 420
           AD +AL KI  MIEERL TR         T DGSV+   EQP K RDG+S VDT+KNE+ 
Sbjct: 366 ADCEALEKITKMIEERLKTRPLPTPPAQPTGDGSVNLTSEQPVKARDGDSVVDTEKNESA 425

Query: 421 EDKNDKEANSDNQPTGE 437
           E+KN+KE N+DN+PT E
Sbjct: 426 ENKNEKETNNDNKPTSE 442



 Score = 83.2 bits (204), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 67/115 (58%), Gaps = 2/115 (1%)

Query: 535 ILYXXXXXXXXSRKRWXXXXXXXXXXXXXXXXXXXXADKQKEEEEIVDAKKRAEEDQRQK 594
           ILY        SRKRW                     D+QKEEEE   A+ + + ++ QK
Sbjct: 539 ILYDEEDEDEDSRKRWRRSVIEEKRKKRLREKEDDLVDRQKEEEE--IAEAKKKAEEEQK 596

Query: 595 QQRDALKLLSEHVVNSGEETMATEEIAKEVKYIDAEKDTVAHYSREGHIGNFSYI 649
           +QRDALKLLSEHVVN G+E M TEEI  EVK I  E+DTVA YSRE HIG+ + I
Sbjct: 597 RQRDALKLLSEHVVNGGKENMITEEITNEVKSIVVEQDTVADYSREDHIGDGNSI 651


>Glyma02g03900.1 
          Length = 921

 Score =  340 bits (871), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 183/317 (57%), Positives = 218/317 (68%), Gaps = 4/317 (1%)

Query: 122 RAYAPMPNGYAAPPQGTVXXXXXXXXXXXXXXMLRPVYPPRPHGALNVAPVSXXXXXXXX 181
           R +AP+PNGYAA P  T+              M+RPV+P RP GA+N+  +S        
Sbjct: 127 RPFAPIPNGYAAAP--TITPAGIPRYPPPYGTMVRPVFPARPPGAVNIPTISRPPVAGIP 184

Query: 182 XXXXXXXXXXXXXXXXSVTPAEKQQITVYI-RIAPTVENEFVLSLIQLCGNIKSWKRTQY 240
                           SVTPAEK Q TVYI +IAPTVENEF+LSL+QLCG IK+WKR Q 
Sbjct: 185 AVRPIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLCGTIKTWKRPQD 244

Query: 241 LSSGTPKSFGFYEFESAEGVLRAMRLLSKLNIDGQELVVNVDEAMKQYLERYVQRKTENS 300
           LS+GTP SFGFYEFESAEGVLRA+RLL+KLNIDGQEL VNV++AMK+ LERY + KTEN 
Sbjct: 245 LSTGTPTSFGFYEFESAEGVLRALRLLTKLNIDGQELKVNVNQAMKENLERYDKTKTENL 304

Query: 301 IKKEAQTAGDEKDDEGTKPSDATDAAKPDVDPSNKEDNDSGNKESHDVKNFGIVTDEDRE 360
             K+ Q    EK+ EG +PS+A   AK D +PSNKE  +S NKESHDV NFGIVTDEDRE
Sbjct: 305 KNKKTQAGVGEKN-EGEQPSNANKDAKADTEPSNKEVLESSNKESHDVANFGIVTDEDRE 363

Query: 361 ADRDALVKIANMIEERLMTRXXXXXXXXXTVDGSVSSVQEQPAKTRDGESDVDTKKNETG 420
           ADR+AL KI+ MIEERL  R         T DGSV+   EQP K RDG+S VDT+KNE+ 
Sbjct: 364 ADREALEKISKMIEERLKIRPLPAPSAQLTGDGSVNLTSEQPVKARDGDSVVDTEKNESA 423

Query: 421 EDKNDKEANSDNQPTGE 437
           E+KN+KE N+DN+PT E
Sbjct: 424 ENKNEKETNNDNKPTSE 440



 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 69/115 (60%), Gaps = 2/115 (1%)

Query: 535 ILYXXXXXXXXSRKRWXXXXXXXXXXXXXXXXXXXXADKQKEEEEIVDAKKRAEEDQRQK 594
           ILY        SRKRW                     D+QKEEEEI + KK+AEE+Q  K
Sbjct: 537 ILYDEEDEDEDSRKRWRRSVIEDKRKKRLREKEDDLVDRQKEEEEIAETKKKAEEEQ--K 594

Query: 595 QQRDALKLLSEHVVNSGEETMATEEIAKEVKYIDAEKDTVAHYSREGHIGNFSYI 649
           QQRDALKLLSEHVVN+G+E M TEEI  EVK I AE+DTVA Y  E HIG+   I
Sbjct: 595 QQRDALKLLSEHVVNAGKENMITEEITIEVKSIVAEQDTVADYHHEYHIGDGDSI 649