Miyakogusa Predicted Gene

Lj2g3v1389570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1389570.1 tr|A9RN15|A9RN15_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_160063,43.59,2e-17,DUF3685,Uncharacterised protein
family Ycf55,CUFF.36955.1
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g47030.1                                                       238   1e-63
Glyma18g37740.1                                                       178   1e-45

>Glyma08g47030.1 
          Length = 491

 Score =  238 bits (606), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 112/130 (86%), Positives = 124/130 (95%), Gaps = 1/130 (0%)

Query: 1   MDTVVSMYEDRFDLCILDSQPIELENS-QTEKQSWWKRLTQQNSKTMSPELHCIVISLFS 59
           MDTVVSMYEDRFDLCIL+SQP+++ +S QTE+Q+WWKRLTQQNSK MSPELHCI IS FS
Sbjct: 362 MDTVVSMYEDRFDLCILESQPVDVTDSIQTEEQNWWKRLTQQNSKAMSPELHCIDISHFS 421

Query: 60  MPIKRTKELRALTGWRYYFSLFLELSDITMPLIRAVVDKASEAISFFLVSLIGRSLGLIY 119
           MP+KRTKELRA+TGWRYYFSLFLELSDITMPLIRAV+DK S+AISFFLVSLIGRSLGLIY
Sbjct: 422 MPVKRTKELRAVTGWRYYFSLFLELSDITMPLIRAVIDKVSDAISFFLVSLIGRSLGLIY 481

Query: 120 TGIRQSLKWK 129
           TGIRQSL+WK
Sbjct: 482 TGIRQSLRWK 491


>Glyma18g37740.1 
          Length = 469

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/99 (84%), Positives = 93/99 (93%), Gaps = 1/99 (1%)

Query: 1   MDTVVSMYEDRFDLCILDSQPIELENS-QTEKQSWWKRLTQQNSKTMSPELHCIVISLFS 59
           MDTVVSMYEDRFDL IL+SQP+++ +S QTE+Q+WWKRLTQQNSK MSPELHCI IS FS
Sbjct: 371 MDTVVSMYEDRFDLFILESQPVDVTDSIQTEEQNWWKRLTQQNSKAMSPELHCIDISHFS 430

Query: 60  MPIKRTKELRALTGWRYYFSLFLELSDITMPLIRAVVDK 98
           MP+KRTKELRALTGWRYYFSLFLELSDITMPLIRAV+DK
Sbjct: 431 MPVKRTKELRALTGWRYYFSLFLELSDITMPLIRAVIDK 469