Miyakogusa Predicted Gene

Lj2g3v1389280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1389280.1 tr|A9SGD1|A9SGD1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_212057,44.9,1e-17,no description,Zinc finger,
RING/FYVE/PHD-type; ZF_RING_1,Zinc finger, RING-type, conserved site;
se,NODE_42364_length_1842_cov_34.508144.path2.1
         (424 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46900.1                                                       639   0.0  
Glyma18g36930.1                                                       634   0.0  
Glyma06g21160.1                                                        61   2e-09
Glyma04g33030.1                                                        59   1e-08
Glyma04g33030.2                                                        59   1e-08
Glyma04g33030.3                                                        59   1e-08
Glyma19g33090.3                                                        50   5e-06
Glyma19g33090.2                                                        50   5e-06
Glyma19g33090.1                                                        50   5e-06
Glyma03g30190.1                                                        50   6e-06

>Glyma08g46900.1 
          Length = 421

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/425 (72%), Positives = 349/425 (82%), Gaps = 5/425 (1%)

Query: 1   MENSEFKDEIM-DIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQ 59
           MEN+ F+D+IM D +H E PDSF C VCLDLLYKPIVLSCGHMCCFWCVY SM+CLRESQ
Sbjct: 1   MENNAFRDQIMEDNEHEEMPDSFVCCVCLDLLYKPIVLSCGHMCCFWCVYNSMSCLRESQ 60

Query: 60  CPICRHQYYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSPEFDPDTCESQA 119
           CP+CR+QYYHFPTVCQ+LHFLLLK+Y  AY RR +QTLEEEKKSGFYSP+FDPDTCESQA
Sbjct: 61  CPVCRNQYYHFPTVCQLLHFLLLKIYTAAYKRRESQTLEEEKKSGFYSPQFDPDTCESQA 120

Query: 120 KFGHXXXXXXXXITHLVPSLCNVGTSEGMEQSKSTNHEGDDGTIHSKRSSIGEAEIIGTP 179
           KFGH        I +L  + CNVGTSE +EQS ST +EGD+GTI S R    E +IIGTP
Sbjct: 121 KFGHSGIPSSSSILNLTSNSCNVGTSECLEQSGSTANEGDEGTIFSNR----EPDIIGTP 176

Query: 180 IKGQKSSQDELCPPQKLSVADVMCIMCKQLLCQPVVLNCGHVYCETCVIKLADEMLRCQV 239
            KG+K  Q+EL   QKLSVADV C MCKQLL  PVVLNCGHVYC+ CVI + DEMLRC+V
Sbjct: 177 AKGKKLPQEELSLQQKLSVADVTCTMCKQLLFHPVVLNCGHVYCQICVINIDDEMLRCKV 236

Query: 240 CQSPHPRGFPKVCLEFDQFLEEQFPEEYKWRRDAIELRQIKVKPETPSSCSSNNHNKGEK 299
           CQSPHPRG PKVCLE D FLEEQFPEEY  RRDAIEL+QIKVKP+TPSSCS +   K E 
Sbjct: 237 CQSPHPRGLPKVCLELDHFLEEQFPEEYGQRRDAIELQQIKVKPDTPSSCSLDGGKKPEN 296

Query: 300 IEFWSDPESKVHIGVGCDFCGMYPIIGDRYKCEDCKEKMGFDLCGDCYDTRSKLPGRFNQ 359
            ++WSDP+SKVHIGVGCDFCGM+PIIGDRY+C DCKEKMGFDLCGDCY +RSKLPGRFNQ
Sbjct: 297 TDWWSDPDSKVHIGVGCDFCGMFPIIGDRYRCIDCKEKMGFDLCGDCYASRSKLPGRFNQ 356

Query: 360 QHTSEHRFKLVQPNVIRNIMLRLVTGQLGDSSIVNESLENLEFPSEASGLFDDGEDNQND 419
           QHTSEH+FKLVQPN+I NIMLRL T QLG+ SI  ES+ N+E  S+ + LF DGEDN ND
Sbjct: 357 QHTSEHKFKLVQPNIIHNIMLRLATAQLGEGSIDLESIGNIEVTSDGAALFGDGEDNHND 416

Query: 420 PEATS 424
            EA +
Sbjct: 417 SEAAN 421


>Glyma18g36930.1 
          Length = 454

 Score =  634 bits (1636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/425 (72%), Positives = 350/425 (82%), Gaps = 5/425 (1%)

Query: 1   MENSEFKDEIM-DIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQ 59
           MEN+ F+D I+ D +H E PDSF C VCLDLLYKPIVLSCGH+CCFWCVY SMNCLRESQ
Sbjct: 34  MENNAFRDRILEDNEHEEIPDSFVCCVCLDLLYKPIVLSCGHICCFWCVYNSMNCLRESQ 93

Query: 60  CPICRHQYYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSPEFDPDTCESQA 119
           CP+CR+QYYHFPTVCQ+LHFLLLK+Y  AY RR NQTLEEEK+SGFYSP+FDPDTCESQA
Sbjct: 94  CPVCRNQYYHFPTVCQLLHFLLLKIYTAAYKRRENQTLEEEKQSGFYSPQFDPDTCESQA 153

Query: 120 KFGHXXXXXXXXITHLVPSLCNVGTSEGMEQSKSTNHEGDDGTIHSKRSSIGEAEIIGTP 179
           KFGH          +L  + CNVGTSE +EQS S  +EGDDGTI+      GE++IIGTP
Sbjct: 154 KFGHSGIPSSSSNLNLTSNSCNVGTSECLEQSGSAANEGDDGTIYYD----GESDIIGTP 209

Query: 180 IKGQKSSQDELCPPQKLSVADVMCIMCKQLLCQPVVLNCGHVYCETCVIKLADEMLRCQV 239
            KG+K  Q+EL   +KLSVADV C MCKQLL  PVVLNCGHVYC+TCVI + DEMLRC+V
Sbjct: 210 AKGKKMPQEELSVQRKLSVADVTCTMCKQLLFHPVVLNCGHVYCQTCVINIDDEMLRCKV 269

Query: 240 CQSPHPRGFPKVCLEFDQFLEEQFPEEYKWRRDAIELRQIKVKPETPSSCSSNNHNKGEK 299
           CQSPHPRG PKVCLE D FLEEQFPEEY  RRDAIEL+QIKVKP+TPSSCS +N  + E 
Sbjct: 270 CQSPHPRGLPKVCLELDHFLEEQFPEEYGQRRDAIELKQIKVKPDTPSSCSLDNGKRVEN 329

Query: 300 IEFWSDPESKVHIGVGCDFCGMYPIIGDRYKCEDCKEKMGFDLCGDCYDTRSKLPGRFNQ 359
           I++WSDP+ KVHIGVGCDFCGM+PIIGDRY+C DCKEKMGFDLCGDCY +RSKLPGRFNQ
Sbjct: 330 IDWWSDPDPKVHIGVGCDFCGMFPIIGDRYRCIDCKEKMGFDLCGDCYASRSKLPGRFNQ 389

Query: 360 QHTSEHRFKLVQPNVIRNIMLRLVTGQLGDSSIVNESLENLEFPSEASGLFDDGEDNQND 419
           QHTSEH+FKLV PN+I N+MLRL T QLG+ SI  ES+ N+E  S+ + LFDDGEDN ND
Sbjct: 390 QHTSEHKFKLVPPNIIHNMMLRLATAQLGEGSIDLESIANIEVTSDGAALFDDGEDNHND 449

Query: 420 PEATS 424
            EAT+
Sbjct: 450 SEATN 454


>Glyma06g21160.1 
          Length = 486

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 15  HGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCPICRHQYYHFPTVC 74
           H E  D F C++CL LLY+P+   CGH  C  C+++SM+  R ++CP+CR   +  P  C
Sbjct: 188 HPERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMD--RGNRCPLCRTVLFISPRTC 245

Query: 75  QM---LHFLLLKVYPVAYTRR 92
            +   L  ++ K +P  Y  R
Sbjct: 246 SISVTLKNIIQKNFPEEYAER 266


>Glyma04g33030.1 
          Length = 304

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 15 HGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCPICRHQYYHFPTVC 74
          H E  D F C++CL LLY+P+   CGH  C  C+++SM+  R ++CP+CR   +  P  C
Sbjct: 6  HPERNDDFDCTLCLKLLYEPVTTPCGHSFCCSCLFQSMD--RGNKCPLCRTVLFISPRTC 63

Query: 75 QM---LHFLLLKVYPVAYTRR 92
           +   L  ++ K +P  Y  R
Sbjct: 64 SISVTLKNIIQKNFPEEYAER 84


>Glyma04g33030.2 
          Length = 292

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 15 HGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCPICRHQYYHFPTVC 74
          H E  D F C++CL LLY+P+   CGH  C  C+++SM+  R ++CP+CR   +  P  C
Sbjct: 6  HPERNDDFDCTLCLKLLYEPVTTPCGHSFCCSCLFQSMD--RGNKCPLCRTVLFISPRTC 63

Query: 75 QM---LHFLLLKVYPVAYTRR 92
           +   L  ++ K +P  Y  R
Sbjct: 64 SISVTLKNIIQKNFPEEYAER 84


>Glyma04g33030.3 
          Length = 238

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 15 HGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCPICRHQYYHFPTVC 74
          H E  D F C++CL LLY+P+   CGH  C  C+++SM+  R ++CP+CR   +  P  C
Sbjct: 6  HPERNDDFDCTLCLKLLYEPVTTPCGHSFCCSCLFQSMD--RGNKCPLCRTVLFISPRTC 63

Query: 75 QM---LHFLLLKVYPVAYTRR 92
           +   L  ++ K +P  Y  R
Sbjct: 64 SISVTLKNIIQKNFPEEYAER 84


>Glyma19g33090.3 
          Length = 442

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 7   KDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRH 65
           K E ++   G   D F C++CLDL   P+V  CGH+ C+ C+Y+ ++   ++ +CP+C+ 
Sbjct: 139 KKEDVEKGSGNDGDFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHLHSDAKECPVCKG 198

Query: 66  Q---------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
           +         Y     V        LK+ P    +R+    +  +++ F  P
Sbjct: 199 EVTLKSVTPVYGRGNNVRGPEEDSALKIPPRPQAKRVESLRQTIQRNAFALP 250


>Glyma19g33090.2 
          Length = 442

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 7   KDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRH 65
           K E ++   G   D F C++CLDL   P+V  CGH+ C+ C+Y+ ++   ++ +CP+C+ 
Sbjct: 139 KKEDVEKGSGNDGDFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHLHSDAKECPVCKG 198

Query: 66  Q---------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
           +         Y     V        LK+ P    +R+    +  +++ F  P
Sbjct: 199 EVTLKSVTPVYGRGNNVRGPEEDSALKIPPRPQAKRVESLRQTIQRNAFALP 250


>Glyma19g33090.1 
          Length = 442

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 7   KDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRH 65
           K E ++   G   D F C++CLDL   P+V  CGH+ C+ C+Y+ ++   ++ +CP+C+ 
Sbjct: 139 KKEDVEKGSGNDGDFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHLHSDAKECPVCKG 198

Query: 66  Q---------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
           +         Y     V        LK+ P    +R+    +  +++ F  P
Sbjct: 199 EVTLKSVTPVYGRGNNVRGPEEDSALKIPPRPQAKRVESLRQTIQRNAFALP 250


>Glyma03g30190.1 
          Length = 442

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 12/109 (11%)

Query: 12  DIDHGETPDS--FCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRHQ-- 66
           DI+ G   D   F C++CLDL   P+V  CGH+ C+ C+Y+ ++   ++ +CP+C+ +  
Sbjct: 143 DIEKGSGNDGDFFDCNICLDLARDPVVTCCGHLFCWSCLYRWLHLHSDAKECPVCKGEVT 202

Query: 67  -------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
                  Y     V        LK+ P    +R+    +  +++ F  P
Sbjct: 203 LKSVTPIYGRANNVRGPEEDSALKIPPRPQAKRVESLRQTIQRNAFALP 251