Miyakogusa Predicted Gene
- Lj2g3v1374500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1374500.1 tr|F2EKY1|F2EKY1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,44.34,3e-18,DUF4228,Protein of unknown function DUF4228;
seg,NULL,CUFF.36861.1
(175 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g03530.1 237 6e-63
Glyma01g04190.1 231 3e-61
Glyma18g18040.1 147 7e-36
Glyma08g40130.1 147 8e-36
Glyma17g10020.1 143 1e-34
Glyma05g01880.1 142 1e-34
Glyma06g19670.1 133 1e-31
Glyma04g35070.1 129 1e-30
Glyma06g19670.2 118 4e-27
Glyma17g17310.1 109 2e-24
Glyma05g22660.1 106 1e-23
Glyma17g17310.2 103 8e-23
Glyma11g29670.1 49 2e-06
>Glyma02g03530.1
Length = 172
Score = 237 bits (604), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/179 (70%), Positives = 136/179 (75%), Gaps = 11/179 (6%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
MGNCQAVDAAVLVIQHP GKIER+YWP+TASEVM+TNPGHYVSLIIPLPV QEQ NQEQ
Sbjct: 1 MGNCQAVDAAVLVIQHPCGKIERLYWPVTASEVMRTNPGHYVSLIIPLPVPPQEQ-NQEQ 59
Query: 61 KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKP---QTE 117
K+VRFT VKLLRPNETLNLG AYRLI TQEVM E EKP Q+E
Sbjct: 60 KTVRFTRVKLLRPNETLNLGHAYRLITTQEVMKVLKAKKHAKTKKPLAEAAEKPHRVQSE 119
Query: 118 KKSSGCESQTAGDSVSGNTNTNQGMRAERQRQR-GSANPAVVRSKSWRPSLQSISEFTS 175
K+SS E+ TAG+S T+QGMRAER R R SANPAVVRSKSWRPSLQSISE S
Sbjct: 120 KQSSASEAHTAGES------THQGMRAERHRPRTASANPAVVRSKSWRPSLQSISELAS 172
>Glyma01g04190.1
Length = 172
Score = 231 bits (589), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 132/179 (73%), Gaps = 11/179 (6%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
MGNCQAVD AVLVIQHP GKIER+YWP+TASEVM+TNPGHYVSLIIPLPV QEQ NQE+
Sbjct: 1 MGNCQAVDGAVLVIQHPCGKIERLYWPVTASEVMRTNPGHYVSLIIPLPVPPQEQ-NQEK 59
Query: 61 KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKPQT---E 117
K+VRFT VKLLRPNETLNLG AYRLI TQEVM EKP T E
Sbjct: 60 KTVRFTRVKLLRPNETLNLGHAYRLITTQEVMKVLKAKKHAKTRKPQAAETEKPHTVLPE 119
Query: 118 KKSSGCESQTAGDSVSGNTNTNQGMRAERQRQR-GSANPAVVRSKSWRPSLQSISEFTS 175
K+SS E+ T GDS T+QGMRAER R R SANPAVVRSKSWRPSLQSISE S
Sbjct: 120 KQSSASEAHTGGDS------THQGMRAERHRPRTASANPAVVRSKSWRPSLQSISESAS 172
>Glyma18g18040.1
Length = 124
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV-TEQEQRNQE 59
MGNCQAVDAA LVIQHP GKIER+YWP++ASEVM+TNPGHYVSLIIPL V +Q Q NQ
Sbjct: 1 MGNCQAVDAAALVIQHPSGKIERLYWPVSASEVMRTNPGHYVSLIIPLAVPPDQGQINQA 60
Query: 60 QKSVRFTGVKLLRPNETLNLGPAYRLIPTQE 90
QK+V FT VKLLRPNETL LG AYRL+ TQE
Sbjct: 61 QKAVLFTRVKLLRPNETLTLGHAYRLVTTQE 91
>Glyma08g40130.1
Length = 154
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV-TEQEQRNQE 59
MGNCQAVDAA LVIQHP GKIER+YWP++ASEVM+TNPGHYVSLIIPL V +Q Q NQE
Sbjct: 1 MGNCQAVDAAALVIQHPSGKIERLYWPVSASEVMRTNPGHYVSLIIPLAVPDDQGQINQE 60
Query: 60 -QKSVRFTGVKLLRPNETLNLGPAYRLIPTQE 90
QK+V FT VKLLRPNETL LG AYRL+ TQE
Sbjct: 61 QQKAVLFTRVKLLRPNETLTLGHAYRLVTTQE 92
>Glyma17g10020.1
Length = 182
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 29/193 (15%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV-TEQEQRNQE 59
MGNCQAVD A LVIQ P GK+ER+YWP++ASEVMKTNP HYV+L+I + + ++ N+
Sbjct: 1 MGNCQAVDTATLVIQQPNGKVERLYWPVSASEVMKTNPDHYVALLISTTLCSSKDNENRS 60
Query: 60 QKS--------VRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETI 111
KS VR T +KLL+P +TL LG YRLI QEVM ++
Sbjct: 61 NKSDNTNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLWAKKQAKMKRNLSDSA 120
Query: 112 EKP-----QTEKKSSGCESQTAGDSVSGNTNTNQGMRAERQRQR----GSANPAVVRSKS 162
+KP +T+K + G E + NQ +AER R +A+ A +S++
Sbjct: 121 QKPNLMKERTDKSARGSEPE-----------DNQETKAERHGSRTTSTNNASSATAKSRT 169
Query: 163 WRPSLQSISEFTS 175
W+PSL+SISE S
Sbjct: 170 WQPSLKSISEAAS 182
>Glyma05g01880.1
Length = 180
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 106/186 (56%), Gaps = 17/186 (9%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV-TEQEQRNQE 59
MGNCQAVD A LVIQ P GK+ER+YWP++ASEVMKTNP HYV+L+I + + ++ N
Sbjct: 1 MGNCQAVDTATLVIQQPNGKVERLYWPVSASEVMKTNPDHYVALLISTTLCSSKDNENCS 60
Query: 60 QKS------VRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEK 113
KS VR T +KLL+P +TL LG YRLI QEVM E+ +K
Sbjct: 61 SKSDNTTNPVRLTRIKLLKPTDTLMLGQVYRLISAQEVMKGLWEKKQAKMKRNLSESAQK 120
Query: 114 PQTEKKSSGCESQTAGDSVSGNTNTNQGMRAERQRQR----GSANPAVVRSKSWRPSLQS 169
P K+ +T + NQ +AER R +A+ A +S++W+PSLQS
Sbjct: 121 PNLMKE------RTDKSTRRSEPEDNQETKAERHGSRTASTNNASSATAKSRTWQPSLQS 174
Query: 170 ISEFTS 175
ISE S
Sbjct: 175 ISEAAS 180
>Glyma06g19670.1
Length = 181
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 105/189 (55%), Gaps = 22/189 (11%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVT-EQEQRNQE 59
MGNCQA+DAA LVIQHP GK+++ Y P++A+ VMKTNPGHYV+L+I + ++ +N
Sbjct: 1 MGNCQAIDAATLVIQHPNGKVDKFYAPLSATHVMKTNPGHYVALLISTTLCPTKDIQNCP 60
Query: 60 QKS----------VRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXE 109
KS VR T +KLL+P +TL LG YRLI TQEVM E
Sbjct: 61 NKSDIKNKNANNPVRITRIKLLKPTDTLVLGQVYRLIKTQEVMKGLKEKQKAKMRQNVPE 120
Query: 110 TIEKPQTEKKSSGCESQTAGDSVSGNTNTNQGMRAERQRQRGSA---NPAVVRSKSWRPS 166
+ KP EK+ S+ + V + ER R R +A N A +++ W+PS
Sbjct: 121 SAHKPDLEKEKVARRSEMEDNKVI--------TKPERARPRITAPTNNGATAKTRFWQPS 172
Query: 167 LQSISEFTS 175
LQSISE S
Sbjct: 173 LQSISEAAS 181
>Glyma04g35070.1
Length = 173
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 100/181 (55%), Gaps = 14/181 (7%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIP---LPVTEQEQRN 57
MGNCQA+DAA LVIQH GK+++ Y P++A+ VMKTNPGHYV+L+I P + + +
Sbjct: 1 MGNCQAIDAATLVIQHTNGKVDKFYAPLSATHVMKTNPGHYVALLISTTLCPTKDIQNCS 60
Query: 58 QEQKSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKPQTE 117
VR T +KLL+P +TL LG YRLI TQEVM E+ K + E
Sbjct: 61 NANNPVRITRIKLLKPTDTLVLGQVYRLITTQEVMKGLREKQKAKMRQNVPESALKLELE 120
Query: 118 KKSSGCESQTAGDSVSGNTNTNQGMRAERQRQRGSA---NPAVVRSKSWRPSLQSISEFT 174
K+ S+ + N ER R R +A N A +++ W+PSLQSISE
Sbjct: 121 KEKVARRSEMEDNKAITN--------PERARPRITATTNNGATAKTRFWQPSLQSISEAA 172
Query: 175 S 175
S
Sbjct: 173 S 173
>Glyma06g19670.2
Length = 163
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVT-EQEQRNQE 59
MGNCQA+DAA LVIQHP GK+++ Y P++A+ VMKTNPGHYV+L+I + ++ +N
Sbjct: 1 MGNCQAIDAATLVIQHPNGKVDKFYAPLSATHVMKTNPGHYVALLISTTLCPTKDIQNCP 60
Query: 60 QKS----------VRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXE 109
KS VR T +KLL+P +TL LG YRLI TQEVM E
Sbjct: 61 NKSDIKNKNANNPVRITRIKLLKPTDTLVLGQVYRLIKTQEVMKGLKEKQKAKMRQNVPE 120
Query: 110 TIEKPQTEKKSSGCESQTAGDSVSGN 135
+ KP EK+ S+ + V+ N
Sbjct: 121 SAHKPDLEKEKVARRSEMEDNKVNFN 146
>Glyma17g17310.1
Length = 178
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
MGNCQA +AA +VIQHPG KIER+YW ++A EVM +NPGHYV+L++ P E +
Sbjct: 1 MGNCQAAEAATVVIQHPGNKIERVYWSLSAHEVMNSNPGHYVALVVSSPTLMAENGTPMK 60
Query: 61 KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKP--QTEK 118
+ +KLLRP++TL++G YRLI ++V+ ET K
Sbjct: 61 Q------LKLLRPDDTLHIGQVYRLISFEDVLKEFASKKCGKLGKLLKETGSHGIQMKHK 114
Query: 119 KSSGCESQTAGDSVSGNTNTNQGMR-------AERQRQRGSANPAVVRSKSWRPSLQSIS 171
S S G+ Q ++ + ++G P V WRP+LQSI+
Sbjct: 115 DSRALNPSRNSKSEFGSIKVEQEIQRMGNNGRSNNNNKKGVGRPFVGSGGQWRPALQSIA 174
Query: 172 EF 173
E
Sbjct: 175 EI 176
>Glyma05g22660.1
Length = 180
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 95/190 (50%), Gaps = 29/190 (15%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
MGNCQA +AA +VIQHPG KIER+YW ++A EVM +NPGHYV+L++ P + E
Sbjct: 1 MGNCQAAEAATVVIQHPGNKIERVYWSLSAHEVMNSNPGHYVALVVSSPTLKAEN----- 55
Query: 61 KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKP-QTEKK 119
+KLLRP++TL++G YRLI ++V+ ET Q + K
Sbjct: 56 -GAPMKQLKLLRPDDTLHIGQVYRLISFEDVLKEFASKKCGKLGKLLKETGSHGIQMKHK 114
Query: 120 SSGCESQTAGDSVSGNTNTNQG-MRAERQRQR---------------GSANPAVVRSKSW 163
S + S N+ T G ++ E++ QR G V W
Sbjct: 115 DS------RATNPSPNSKTEFGSIKVEQEIQRMGNHGSSSSNNNNNKGVGRHFVGSGGQW 168
Query: 164 RPSLQSISEF 173
RP+LQSI+E
Sbjct: 169 RPALQSIAEI 178
>Glyma17g17310.2
Length = 146
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
Query: 1 MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
MGNCQA +AA +VIQHPG KIER+YW ++A EVM +NPGHYV+L++ P E +
Sbjct: 1 MGNCQAAEAATVVIQHPGNKIERVYWSLSAHEVMNSNPGHYVALVVSSPTLMAENGTPMK 60
Query: 61 KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVM 92
+ +KLLRP++TL++G YRLI ++V+
Sbjct: 61 Q------LKLLRPDDTLHIGQVYRLISFEDVL 86
>Glyma11g29670.1
Length = 167
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 4 CQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQKSV 63
C A+D ++ I H G +E + PITA EV+K NP H +S + Q V
Sbjct: 15 CGALD--LIRIVHLNGYVEEITRPITAGEVLKANPNHVLS------------KPSSQGVV 60
Query: 64 RFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKPQTEKKSSGC 123
R + +L P L G Y LIP + + +KP T K + G
Sbjct: 61 RR--ILILSPETELKRGSIYFLIPESSLPEKKRLAGKGRNVGGDNDIKKKPSTLKGNKGS 118
Query: 124 ESQTAGDSVSG--NTNTNQGMRAE----RQRQRGSANPAVVRSKSWRPSLQSISE 172
G N T++G + + R R++G R WRP L+SI E
Sbjct: 119 SDDDYSSLSQGCLNKATHKGSKEKKSSCRDRRKG-------RIGIWRPHLESILE 166