Miyakogusa Predicted Gene

Lj2g3v1373360.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1373360.2 Non Chatacterized Hit- tr|G7JAI8|G7JAI8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,63.27,0.00000000004,no description,Nucleotide-binding,
alpha-beta plait; RRM,RNA recognition motif domain;
coiled-coil,N,CUFF.36859.2
         (446 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g04230.1                                                       371   e-102
Glyma02g03460.1                                                       365   e-101

>Glyma01g04230.1 
          Length = 331

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/333 (59%), Positives = 235/333 (70%), Gaps = 12/333 (3%)

Query: 123 LPLEQMKQWFDKKPKGFGEGKVYDTSVEDKLLEELRQSREAQAANLEKFKANPVKPASNK 182
           L LE+M +WF+KKP+GFGEGKVYDTSVEDKLLEE+RQSR AQA NL+K  +NPVK ASN+
Sbjct: 2   LSLEKMNKWFEKKPRGFGEGKVYDTSVEDKLLEEMRQSRIAQAENLKKLMSNPVKHASNE 61

Query: 183 NAQNQKDAEVVPLGGRVLLANLPKKKNIHRDLKSAMQGVPGIINIAPAVTGNKKTRDPIC 242
           + Q +KDAE+VP+GGRV L NLPKKKNIH+DLKSA+QG+PGIINI PAVTGNKKTRDPIC
Sbjct: 62  SVQKKKDAELVPIGGRVCLVNLPKKKNIHKDLKSALQGIPGIINIVPAVTGNKKTRDPIC 121

Query: 243 KGFAFVDFKDKKDAVRFVELYTGQTLTFGKIQKQIKCEVVNAQXXXXXPELSKNLGALPR 302
           KGFA+VDFK ++DAVRFVELYTGQT+TFGKIQKQIKCE++N Q             A P+
Sbjct: 122 KGFAYVDFKREEDAVRFVELYTGQTITFGKIQKQIKCELLNVQSSSSLKLSKNLSAA-PQ 180

Query: 303 LMDSPFXXXXXXXXXXXXXAVSSWDGTDSNDLD---------EEQESDGENQEYATALDV 353
           L+ + F             A SSWD T+S+D           EEQE D +NQE  TAL V
Sbjct: 181 LVAAAFEEDSNEDSNLDGSARSSWDETNSSDDLDDLDYQMNGEEQEDDEDNQESVTALGV 240

Query: 354 DFDDSVEMTIDSEINPLPSEQGTINPTAEPEKKSSAKFRQXXXXXXXXXXXXXXXXXXXX 413
           D DD+VEM ID E   LPSEQ   NP A   +KSSAK +Q                    
Sbjct: 241 DHDDNVEMRIDPENISLPSEQVDRNPAA--VQKSSAKVKQENARKKKPISKEKTKKVLDV 298

Query: 414 XGSAKRLKIKEKAVLTDVFSKYGKRAVLASKDN 446
            GS++RLKI+EKAVL++VFSKYG +A LASKDN
Sbjct: 299 PGSSRRLKIREKAVLSEVFSKYGLKATLASKDN 331


>Glyma02g03460.1 
          Length = 363

 Score =  365 bits (937), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/333 (60%), Positives = 239/333 (71%), Gaps = 12/333 (3%)

Query: 123 LPLEQMKQWFDKKPKGFGEGKVYDTSVEDKLLEELRQSREAQAANLEKFKANPVKPASNK 182
           LPL+ M +WF+KKP+GFGEGKVYDTSVEDKLLEE+RQSR AQA NL K K+NPVK ASN+
Sbjct: 34  LPLDDMNKWFEKKPRGFGEGKVYDTSVEDKLLEEMRQSRIAQAENLTKLKSNPVKHASNE 93

Query: 183 NAQNQKDAEVVPLGGRVLLANLPKKKNIHRDLKSAMQGVPGIINIAPAVTGNKKTRDPIC 242
           + Q +KD+E+VP+GGRV L NLPKKKNIH+DLKSA+QG+PGI NI PAVTGNKKTRDPIC
Sbjct: 94  SVQKKKDSELVPIGGRVCLVNLPKKKNIHKDLKSALQGIPGITNIVPAVTGNKKTRDPIC 153

Query: 243 KGFAFVDFKDKKDAVRFVELYTGQTLTFGKIQKQIKCEVVNAQXXXXXPELSKNLGALPR 302
           KGFA+VDF+ ++DA+RFVELYTGQ +TFGKIQKQIKCE++N Q      +LSKNL A P+
Sbjct: 154 KGFAYVDFECEEDAIRFVELYTGQAITFGKIQKQIKCELLNVQSSSSSLKLSKNLNAAPQ 213

Query: 303 LMDSPFXXXXXXXXXXXXXAVSSWDGTDSNDLD---------EEQESDGENQEYATALDV 353
           L+ + F             A+SSWD  +S+D           EEQE D +NQE  + L V
Sbjct: 214 LV-ARFEEVSNEDSNLDGSALSSWDEANSSDDLDDLDYQMNGEEQEDDEDNQESVSTLGV 272

Query: 354 DFDDSVEMTIDSEINPLPSEQGTINPTAEPEKKSSAKFRQXXXXXXXXXXXXXXXXXXXX 413
           D DDSVEM ID EI  LPSEQ   N  A  E+KSSAK +Q                    
Sbjct: 273 DHDDSVEMRIDPEICSLPSEQVDRNHAA--EQKSSAKVKQENARKKKPTSKDRDKKVLGV 330

Query: 414 XGSAKRLKIKEKAVLTDVFSKYGKRAVLASKDN 446
            GS++RLKI+EKAVL+DVFSKYG +A LASKDN
Sbjct: 331 PGSSRRLKIREKAVLSDVFSKYGLKATLASKDN 363