Miyakogusa Predicted Gene

Lj2g3v1368240.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1368240.2 Non Chatacterized Hit- tr|C4JA88|C4JA88_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,69.49,1e-17,Sterile
alpha motif.,Sterile alpha motif domain; SAM_1,Sterile alpha motif,
type 1; SUBFAMILY NOT NA,CUFF.36853.2
         (338 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g03370.1                                                       480   e-136
Glyma01g04320.1                                                       466   e-131
Glyma03g09660.1                                                        82   1e-15
Glyma08g46440.1                                                        79   9e-15
Glyma08g46440.4                                                        77   2e-14
Glyma16g18440.1                                                        77   3e-14
Glyma18g35890.1                                                        75   1e-13
Glyma08g46440.3                                                        74   3e-13
Glyma16g18440.2                                                        58   1e-08

>Glyma02g03370.1 
          Length = 337

 Score =  480 bits (1236), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 272/340 (80%), Gaps = 9/340 (2%)

Query: 1   MSDTSRGRVTITLGRSGQVVKRXXXXXXXXXXXXXXXXXXKRSVRDRIGSNADSSMWHGN 60
           MSD SRGRVTITLGRSG VVKR                  KRSVRDRIGSNAD+S W+GN
Sbjct: 1   MSDPSRGRVTITLGRSGHVVKRDVSAADVSSFSSLHSAGTKRSVRDRIGSNADNSGWYGN 60

Query: 61  GLASNKRQRGDMSSRNGLDDGRIGKDDLRLKLIQKSASRQAESNDKKRHGDLREKLSKAV 120
           G + NKR RGD+S +NGLD      +DLRLKL++KSASRQ +SN  KRH DLREKLSKA 
Sbjct: 61  GHSGNKRHRGDVSMQNGLDG-----NDLRLKLMRKSASRQTDSNGNKRHMDLREKLSKAS 115

Query: 121 QPPRDSFNSKPRMPEPRERSLLRQLPPARSSDDLMRMESMRSSYSPWTLDHIRQRSPDGF 180
            P  +S+NSK   PE RE SLLRQ+P ARSSDDL+RM+SMRSSYSPWTLDHIR+RSPDGF
Sbjct: 116 HPLTNSYNSKQHGPESRETSLLRQIPSARSSDDLLRMKSMRSSYSPWTLDHIRRRSPDGF 175

Query: 181 PSTSRGISPQRNAGDLQRRPLNRTYDSARSVPYVGRDVLETSRPPSTAPASFTSRSTMST 240
           PSTSRGISPQR+  DL RRP++RTYD   SV YVGRDVLETSRPP +AP SF SRSTMST
Sbjct: 176 PSTSRGISPQRDVQDLHRRPVSRTYDGVSSVSYVGRDVLETSRPPVSAPQSFMSRSTMST 235

Query: 241 WPPVTAKSVASHPGQLPPSSSVAPRASYAGDE----HQSQQTVDGLLHALGLGKYVILFK 296
            PPVTAK VASHPGQLPPS SVA R+SY GDE     QS QTVDGLLHALGL KY ILFK
Sbjct: 236 LPPVTAKPVASHPGQLPPSGSVAQRSSYVGDEQVQVQQSHQTVDGLLHALGLQKYAILFK 295

Query: 297 AEEVDMTALKQMGENDLKELGIPMGPRKKILLALMPRTKR 336
           AEEVDMTALKQMGENDLKELGIPMGPRKKILLAL+PRTKR
Sbjct: 296 AEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKR 335


>Glyma01g04320.1 
          Length = 336

 Score =  466 bits (1199), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 247/340 (72%), Positives = 267/340 (78%), Gaps = 10/340 (2%)

Query: 1   MSDTSRGRVTITLGRSGQVVKRXXXXXXXXXXXXXXXXXXKRSVRDRIGSNADSSMWHGN 60
           MSD SRGRVTITLGRSG VVKR                  KRSVRDRIGSNADSS WHGN
Sbjct: 1   MSDPSRGRVTITLGRSGHVVKRDASAVDVSSFSSIHSAGTKRSVRDRIGSNADSSGWHGN 60

Query: 61  GLASNKRQRGDMSSRNGLDDGRIGKDDLRLKLIQKSASRQAESNDKKRHGDLREKLSKAV 120
           G + NKR RGD+S +NGLD      +DLRLKL++KSA  QA+SN  KRH DLREKLSKA 
Sbjct: 61  GHSGNKRHRGDVSMQNGLDG-----NDLRLKLMRKSALGQADSNGSKRHMDLREKLSKAS 115

Query: 121 QPPRDSFNSKPRMPEPRERSLLRQLPPARSSDDLMRMESMRSSYSPWTLDHIRQRSPDGF 180
            P  +++NSK   P+ RE SL RQ+P ARSSD L+RMESMRSSYSPWTLDHIR+RSPDGF
Sbjct: 116 HPLANTYNSKQHGPDSRETSL-RQIPSARSSDKLLRMESMRSSYSPWTLDHIRRRSPDGF 174

Query: 181 PSTSRGISPQRNAGDLQRRPLNRTYDSARSVPYVGRDVLETSRPPSTAPASFTSRSTMST 240
           PSTSRGISPQR+  DL RRP++RTYD  RSV YVGRDVLETSRPP + P SF SRSTMST
Sbjct: 175 PSTSRGISPQRDVQDLHRRPVSRTYDGVRSVSYVGRDVLETSRPPISTPQSFMSRSTMST 234

Query: 241 WPPVTAKSVASHPGQLPPSSSVAPRASYAGDE----HQSQQTVDGLLHALGLGKYVILFK 296
            PPVT K VASHPGQLPPS SVA R SY GDE     QS QTVDGLLHALGL KY ILFK
Sbjct: 235 LPPVTVKPVASHPGQLPPSGSVAQRPSYVGDEQVQVQQSHQTVDGLLHALGLQKYAILFK 294

Query: 297 AEEVDMTALKQMGENDLKELGIPMGPRKKILLALMPRTKR 336
           AEEVDMTALKQMGENDLKELGIPMGPRKKILLA++PRTKR
Sbjct: 295 AEEVDMTALKQMGENDLKELGIPMGPRKKILLAVLPRTKR 334


>Glyma03g09660.1 
          Length = 207

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 82/151 (54%), Gaps = 10/151 (6%)

Query: 183 TSRGISPQRNAGDLQRRPLNRTYDSARS-VPYVG--RDVLETSRPPSTAPASFTSRSTMS 239
           T+R +S Q     LQR+ L     S +S  P V   R+ L  +  P   P ++    T  
Sbjct: 60  TNRKVSAQDLRFKLQRKGLQPASQSGKSSAPNVLDLRERLSGTMAPQ--PTNYDLPKTKV 117

Query: 240 TWPPVTAKSVASHPGQLPPSSSVAPRASYAGDEHQSQQTVDGLLHALGLGKYVILFKAEE 299
             P   +  V +   Q+   +  AP+ S+     ++  +VD  L +LGL KY+I F+AEE
Sbjct: 118 IKPSSKSVGVEAPAVQIKRPADPAPKKSW-----KAGPSVDEFLRSLGLEKYLITFQAEE 172

Query: 300 VDMTALKQMGENDLKELGIPMGPRKKILLAL 330
           VDMTAL  M + DLK +GIPMGPRKKILLAL
Sbjct: 173 VDMTALNHMTDEDLKAMGIPMGPRKKILLAL 203


>Glyma08g46440.1 
          Length = 201

 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 43/53 (81%)

Query: 278 TVDGLLHALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLAL 330
           ++D  L +LGL KY+I F+AEEVDMTAL  M + DLK +GIPMGPRKKILLAL
Sbjct: 145 SLDDFLQSLGLEKYLIGFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLAL 197


>Glyma08g46440.4 
          Length = 176

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 45/57 (78%)

Query: 274 QSQQTVDGLLHALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLAL 330
           ++  ++D  L +LGL KY+I F+AEEVDMTAL  M + DLK +GIPMGPRKKILLAL
Sbjct: 116 KADASLDDFLQSLGLEKYLIGFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLAL 172


>Glyma16g18440.1 
          Length = 207

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 42/53 (79%)

Query: 278 TVDGLLHALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLAL 330
           +VD  L +L L KY+I F+AEEVDMTAL  M + DLK +GIPMGPRKKILLAL
Sbjct: 151 SVDEFLRSLCLEKYLITFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLAL 203


>Glyma18g35890.1 
          Length = 60

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 43/53 (81%)

Query: 278 TVDGLLHALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLAL 330
           ++D  L +LGL KY++ F+AEEVDMTAL  M + DLK +GIPMGPRKKILLAL
Sbjct: 4   SLDDFLQSLGLEKYLLSFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLAL 56


>Glyma08g46440.3 
          Length = 191

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 39/46 (84%)

Query: 285 ALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLAL 330
           +LGL KY+I F+AEEVDMTAL  M + DLK +GIPMGPRKKILLAL
Sbjct: 142 SLGLEKYLIGFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLAL 187


>Glyma16g18440.2 
          Length = 207

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 278 TVDGLLHALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPM 320
           +VD  L +L L KY+I F+AEEVDMTAL  M + DLK +GIPM
Sbjct: 151 SVDEFLRSLCLEKYLITFQAEEVDMTALNHMTDEDLKAMGIPM 193