Miyakogusa Predicted Gene

Lj2g3v1349220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1349220.1 Non Chatacterized Hit- tr|D7L574|D7L574_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,69.74,9e-18,seg,NULL,CUFF.36800.1
         (421 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g04820.1                                                       409   e-114
Glyma02g02690.1                                                       397   e-110
Glyma01g30470.1                                                       246   3e-65
Glyma15g39920.1                                                       174   2e-43
Glyma15g39940.1                                                       135   6e-32
Glyma11g32340.1                                                        67   3e-11
Glyma06g23050.1                                                        56   6e-08

>Glyma01g04820.1 
          Length = 446

 Score =  409 bits (1052), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/365 (64%), Positives = 258/365 (70%), Gaps = 34/365 (9%)

Query: 1   MAATAAN-------DGPVLNLINKRLRALRKKQNRITAMEESLAQGKPLNKEQEEVLRSK 53
           MAATA+N       DGPV++LINKRLRALRKK NRI AMEE++ QGKPLNKEQEEVLRSK
Sbjct: 1   MAATASNNDVAAAADGPVMSLINKRLRALRKKLNRILAMEEAVTQGKPLNKEQEEVLRSK 60

Query: 54  PSVLALIDELEKLRQPXXXXXXXXXXXXXQNRGGT---------------LPETT---QQ 95
           PSVLALIDELEKLRQP             QN G +               L E++   + 
Sbjct: 61  PSVLALIDELEKLRQPLATALSEEL----QNNGTSSQNSRETETETENETLAESSGSVEP 116

Query: 96  RPNSTGSDVV-EDILNLLYLGSLFEVKSQNDFTSTMLTRTLERGCCLTYDYVTDDATDLL 154
             NST +DVV ED+LNLLY GSLF+VKS  DF STMLTRT ERGCCLTYDYVTDDATDLL
Sbjct: 117 NTNSTTNDVVVEDLLNLLYFGSLFDVKS--DFASTMLTRTHERGCCLTYDYVTDDATDLL 174

Query: 155 GEKDLDSISDLRGLLISRPADSSFSHKNALQRCIEHAKLWLSKAEQPIEPNAGVTYAGLR 214
           GEKDLDSIS LRGLL+SRPADSSFSHKNALQRC+EHA+LWL+K+EQPIEP+  VTYA LR
Sbjct: 175 GEKDLDSISALRGLLVSRPADSSFSHKNALQRCLEHARLWLTKSEQPIEPDTDVTYAALR 234

Query: 215 DKLNKIMSSEYFTTTPEMKAPGEV-XXXXXGSYGSFQVPVHDSPVHVEVEGSDSQPQEKD 273
           +KLNKIMSSEYF TTPEMKAP EV      G+Y SF VPVH S V VEVE    Q QEKD
Sbjct: 235 EKLNKIMSSEYFITTPEMKAPVEVAAAAAGGNYVSFHVPVHGSVVPVEVEQPVFQSQEKD 294

Query: 274 QGTINFQGHGSTDDQSDPERELQKXXXXXXXXXXXXXXXXXQTNPQVAGELNQPDVDAKD 333
           +GT NFQGHGS +D SD E ELQK                 Q N Q   E N+ DV+AKD
Sbjct: 295 EGTANFQGHGSEEDLSDHEGELQKDEVEAENAGEVVSAQHEQANQQADVEYNERDVEAKD 354

Query: 334 QH-YP 337
           Q  YP
Sbjct: 355 QQSYP 359


>Glyma02g02690.1 
          Length = 445

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/361 (63%), Positives = 252/361 (69%), Gaps = 27/361 (7%)

Query: 1   MAATA-------ANDGPVLNLINKRLRALRKKQNRITAMEESLAQGKPLNKEQEEVLRSK 53
           MAATA       ANDGPV++LINKRLRALRKK NRI AMEE++  GKPLNKEQEEVLRSK
Sbjct: 1   MAATASNNDVAAANDGPVMSLINKRLRALRKKLNRILAMEEAVTLGKPLNKEQEEVLRSK 60

Query: 54  PSVLALIDELEKLRQPXXXXXXXXXX----------XXXQNRGGTLPET---TQQRPNST 100
           PSVLALIDEL+KLRQP                       +    TL E+   T+   NS 
Sbjct: 61  PSVLALIDELDKLRQPLATALSEELQINGTSSQNPRHETETENETLAESSGSTEPNSNSR 120

Query: 101 GSDVVEDILNLLYLGSLFEVKSQNDFTSTMLTRTLERGCCLTYDYVTDDATDLLGEKDLD 160
              VVED+LNLLY GSLF+VKS  DF STMLTRT ERGCCLTYDYVTDDATDLLGEKDLD
Sbjct: 121 NDVVVEDLLNLLYFGSLFDVKS--DFASTMLTRTHERGCCLTYDYVTDDATDLLGEKDLD 178

Query: 161 SISDLRGLLISRPADSSFSHKNALQRCIEHAKLWLSKAEQPIEPNAGVTYAGLRDKLNKI 220
           SIS LRGLL+SRPADSSFSHKNAL RC+EHAKLWL+K+EQPI P+A VTYA LR+KLNKI
Sbjct: 179 SISALRGLLVSRPADSSFSHKNALHRCVEHAKLWLAKSEQPIGPDADVTYAALREKLNKI 238

Query: 221 MSSEYFTTTPEMKAPGEV-XXXXXGSYGSFQVPVHDSPVHVEVEGSDSQPQEKDQGTINF 279
           MSSEYFTTTPEMKAP EV      G+Y SF VPVH S V VEVE    Q QEKD+GT   
Sbjct: 239 MSSEYFTTTPEMKAPVEVAAAAAGGNYVSFHVPVHGSVVPVEVEQPVFQSQEKDEGTA-I 297

Query: 280 QGHGSTDDQSDPERELQKXXXXXXXXXX--XXXXXXXQTNPQVAGELNQPDVDAKDQH-Y 336
           QGHGS +D SDPE EL K                   QTN QV  E N+ DV+AKDQ  Y
Sbjct: 298 QGHGSEEDPSDPEGELLKDEVEAEAENAGEVVSVQHEQTNQQVDLEYNERDVEAKDQQSY 357

Query: 337 P 337
           P
Sbjct: 358 P 358


>Glyma01g30470.1 
          Length = 289

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/165 (72%), Positives = 133/165 (80%), Gaps = 3/165 (1%)

Query: 91  ETTQQRPNSTGSDVVEDILNLLYLGSLFEVKSQNDFTSTMLTRTLERGCCLTYDYVTDDA 150
           ++ +   NS    VVED+LN LY GS F+VKS  DF S MLT+T ERGCCLTYDYVT+D 
Sbjct: 4   DSIEPNSNSRNDIVVEDLLNFLYFGSFFDVKS--DFVSMMLTKTHERGCCLTYDYVTNDD 61

Query: 151 TDLLGEKDLDSISDLRGLLISRPADSSFSHKNALQRCIEHAKLWLSKAEQPIEPNAGVTY 210
           TDLLGEKDLDSIS LRGLL+SRPADSSFSHKNAL RC+EHAKLWL+K+EQPI PNA VTY
Sbjct: 62  TDLLGEKDLDSISRLRGLLVSRPADSSFSHKNALHRCVEHAKLWLAKSEQPIGPNADVTY 121

Query: 211 AGLRDKLNKIMSSEYFTTTPEMKAPGEVXXXXX-GSYGSFQVPVH 254
           A LR+KLN IMSSEYFTTTPEMKAP EV      G+Y SF VPVH
Sbjct: 122 AALREKLNNIMSSEYFTTTPEMKAPVEVDVAAAGGNYVSFHVPVH 166


>Glyma15g39920.1 
          Length = 141

 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/115 (74%), Positives = 93/115 (80%), Gaps = 2/115 (1%)

Query: 92  TTQQRPNSTGSDVVEDILNLLYLGSLFEVKSQNDFTSTMLTRTLERGCCLTYDYVTDDAT 151
           +T+   NS    VVE +LNLLY GSLF VKS  DF STMLTRT ERGCCLTYDYVTDDA 
Sbjct: 28  STEPNSNSRNDVVVEGLLNLLYFGSLFNVKS--DFASTMLTRTQERGCCLTYDYVTDDAI 85

Query: 152 DLLGEKDLDSISDLRGLLISRPADSSFSHKNALQRCIEHAKLWLSKAEQPIEPNA 206
           DLLGEKDLDSIS LRGLLISR  DSSFSHKNAL  C+EH KLWL+K+EQPI P+A
Sbjct: 86  DLLGEKDLDSISALRGLLISRSTDSSFSHKNALHCCVEHVKLWLAKSEQPIGPDA 140


>Glyma15g39940.1 
          Length = 200

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/115 (61%), Positives = 81/115 (70%), Gaps = 22/115 (19%)

Query: 92  TTQQRPNSTGSDVVEDILNLLYLGSLFEVKSQNDFTSTMLTRTLERGCCLTYDYVTDDAT 151
           +T+   NS    VVED+LNLLY GSLF+VKS  DF          RG CLTYDY+TDDAT
Sbjct: 30  STELNSNSRNDVVVEDLLNLLYFGSLFDVKS--DF----------RGYCLTYDYITDDAT 77

Query: 152 DLLGEKDLDSISDLRGLLISRPADSSFSHKNALQRCIEHAKLWLSKAEQPIEPNA 206
           D+LGEKDLDSIS LRG          FSHKNAL RC+EHAKLWL+K+EQPI P+A
Sbjct: 78  DMLGEKDLDSISALRG----------FSHKNALHRCVEHAKLWLAKSEQPIGPDA 122


>Glyma11g32340.1 
          Length = 101

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/54 (61%), Positives = 40/54 (74%)

Query: 4  TAANDGPVLNLINKRLRALRKKQNRITAMEESLAQGKPLNKEQEEVLRSKPSVL 57
          T  N+  V++LINK LRAL KK N I   EE++ QGKPLNKEQEEVL  KPS++
Sbjct: 11 TTTNNSHVMSLINKHLRALSKKFNCILTTEEAITQGKPLNKEQEEVLHCKPSMI 64


>Glyma06g23050.1 
          Length = 77

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 33/38 (86%)

Query: 32 MEESLAQGKPLNKEQEEVLRSKPSVLALIDELEKLRQP 69
          ME+ + QGKPL KEQEEVL SKPS+LAL DEL+KL+QP
Sbjct: 1  MEDVVTQGKPLIKEQEEVLCSKPSILALSDELDKLQQP 38