Miyakogusa Predicted Gene

Lj2g3v1338840.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1338840.2 Non Chatacterized Hit- tr|C5XFN5|C5XFN5_SORBI
Putative uncharacterized protein Sb03g009200
OS=Sorghu,28.32,1e-18,coiled-coil,NULL; DUF1664,Protein of unknown
function DUF1664; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.36802.2
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g04980.2                                                       425   e-119
Glyma01g04980.1                                                       424   e-119
Glyma01g04980.3                                                       409   e-114
Glyma02g02490.1                                                       168   6e-42
Glyma02g02470.2                                                       115   4e-26
Glyma02g02470.1                                                       115   4e-26
Glyma08g29150.1                                                        86   6e-17
Glyma08g29150.2                                                        86   7e-17
Glyma08g29150.3                                                        85   1e-16
Glyma18g52020.1                                                        84   2e-16

>Glyma01g04980.2 
          Length = 331

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/302 (72%), Positives = 245/302 (81%), Gaps = 12/302 (3%)

Query: 1   MAMAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEY 60
           MAMAMQSGIG+SKILIIAGAGYT TVLIKNGKLSDLIG+LQ LVKGLEKSG+ AEGEGEY
Sbjct: 1   MAMAMQSGIGVSKILIIAGAGYTGTVLIKNGKLSDLIGELQLLVKGLEKSGEHAEGEGEY 60

Query: 61  VDAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGIS 120
            DAIAAQVRRLANEVRQLASNRPITV+NGGS Q NL SLVVPA ALGALGYGYM WKGIS
Sbjct: 61  ADAIAAQVRRLANEVRQLASNRPITVLNGGSEQSNLSSLVVPAAALGALGYGYMWWKGIS 120

Query: 121 FSDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKD 180
           FSDLMYVT+R MEKAV DL KKL H +DVIAD KKHLTQRI+NL+DKMLK NEL RS KD
Sbjct: 121 FSDLMYVTRRNMEKAVADLTKKLQHASDVIADTKKHLTQRIQNLNDKMLKLNELQRSTKD 180

Query: 181 DVSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPE 240
           +V+GVRSTIT++H+DLG L+ +V+ LD +LA L   QD  NYG+ YLI+ +HG   K PE
Sbjct: 181 EVAGVRSTITNIHEDLGYLQQTVETLDYRLAELSSKQDYANYGLSYLIDYVHGKSQKKPE 240

Query: 241 HLQEQLKLPGKTRNLLTYSGTPNLNGLKDIVLP-TGLGMLASD-----------KPQRPL 288
            LQEQLKL GK+ NL+TY GTPNL GLKDI    +GL M ASD           + +RPL
Sbjct: 241 LLQEQLKLSGKSPNLITYKGTPNLMGLKDIAETLSGLDMSASDSVMPDGGDKREQQRRPL 300

Query: 289 LR 290
           LR
Sbjct: 301 LR 302


>Glyma01g04980.1 
          Length = 339

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/302 (72%), Positives = 245/302 (81%), Gaps = 12/302 (3%)

Query: 1   MAMAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEY 60
           MAMAMQSGIG+SKILIIAGAGYT TVLIKNGKLSDLIG+LQ LVKGLEKSG+ AEGEGEY
Sbjct: 1   MAMAMQSGIGVSKILIIAGAGYTGTVLIKNGKLSDLIGELQLLVKGLEKSGEHAEGEGEY 60

Query: 61  VDAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGIS 120
            DAIAAQVRRLANEVRQLASNRPITV+NGGS Q NL SLVVPA ALGALGYGYM WKGIS
Sbjct: 61  ADAIAAQVRRLANEVRQLASNRPITVLNGGSEQSNLSSLVVPAAALGALGYGYMWWKGIS 120

Query: 121 FSDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKD 180
           FSDLMYVT+R MEKAV DL KKL H +DVIAD KKHLTQRI+NL+DKMLK NEL RS KD
Sbjct: 121 FSDLMYVTRRNMEKAVADLTKKLQHASDVIADTKKHLTQRIQNLNDKMLKLNELQRSTKD 180

Query: 181 DVSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPE 240
           +V+GVRSTIT++H+DLG L+ +V+ LD +LA L   QD  NYG+ YLI+ +HG   K PE
Sbjct: 181 EVAGVRSTITNIHEDLGYLQQTVETLDYRLAELSSKQDYANYGLSYLIDYVHGKSQKKPE 240

Query: 241 HLQEQLKLPGKTRNLLTYSGTPNLNGLKDIVLP-TGLGMLASD-----------KPQRPL 288
            LQEQLKL GK+ NL+TY GTPNL GLKDI    +GL M ASD           + +RPL
Sbjct: 241 LLQEQLKLSGKSPNLITYKGTPNLMGLKDIAETLSGLDMSASDSVMPDGGDKREQQRRPL 300

Query: 289 LR 290
           LR
Sbjct: 301 LR 302


>Glyma01g04980.3 
          Length = 320

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/302 (71%), Positives = 239/302 (79%), Gaps = 23/302 (7%)

Query: 1   MAMAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEY 60
           MAMAMQSGIG+SKILIIAGAGYT TVLIKNGKLSDLIG+LQ LVKGLEKSG+ AEGEGEY
Sbjct: 1   MAMAMQSGIGVSKILIIAGAGYTGTVLIKNGKLSDLIGELQLLVKGLEKSGEHAEGEGEY 60

Query: 61  VDAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGIS 120
            DAIAAQVRRLANEVRQLASNRPITV+NGGS Q NL SLVVPA ALGALGYGYM WKGIS
Sbjct: 61  ADAIAAQVRRLANEVRQLASNRPITVLNGGSEQSNLSSLVVPAAALGALGYGYMWWKGIS 120

Query: 121 FSDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKD 180
           FSDLMYVT+R MEKAV DL KKL H +DVIAD KKHLTQRI+NL+DKMLK NEL RS KD
Sbjct: 121 FSDLMYVTRRNMEKAVADLTKKLQHASDVIADTKKHLTQRIQNLNDKMLKLNELQRSTKD 180

Query: 181 DVSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPE 240
           +V+GVRSTIT++H+DLG L+ +V+ LD             NYG+ YLI+ +HG   K PE
Sbjct: 181 EVAGVRSTITNIHEDLGYLQQTVETLDY-----------ANYGLSYLIDYVHGKSQKKPE 229

Query: 241 HLQEQLKLPGKTRNLLTYSGTPNLNGLKDIVLP-TGLGMLASD-----------KPQRPL 288
            LQEQLKL GK+ NL+TY GTPNL GLKDI    +GL M ASD           + +RPL
Sbjct: 230 LLQEQLKLSGKSPNLITYKGTPNLMGLKDIAETLSGLDMSASDSVMPDGGDKREQQRRPL 289

Query: 289 LR 290
           LR
Sbjct: 290 LR 291


>Glyma02g02490.1 
          Length = 101

 Score =  168 bits (425), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 85/95 (89%), Positives = 89/95 (93%)

Query: 1  MAMAMQSGIGMSKILIIAGAGYTSTVLIKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEY 60
          MAMAMQSGIG+SKILIIAGAGYTSTVLIK GKLSDLIG+LQ LVKGLEKSG+ AEGEGEY
Sbjct: 1  MAMAMQSGIGVSKILIIAGAGYTSTVLIKTGKLSDLIGELQLLVKGLEKSGEHAEGEGEY 60

Query: 61 VDAIAAQVRRLANEVRQLASNRPITVVNGGSGQGN 95
           DAIAAQVRRLANEVRQLASNRPITV+NGGS Q N
Sbjct: 61 ADAIAAQVRRLANEVRQLASNRPITVLNGGSEQSN 95


>Glyma02g02470.2 
          Length = 152

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 81/123 (65%), Gaps = 16/123 (13%)

Query: 182 VSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEH 241
           V+GVRSTITD+H+DLG L+ +V+ LD +LA L   QD  NYG+ YLI+ +HG   K PE 
Sbjct: 3   VAGVRSTITDIHEDLGYLQQTVETLDYRLAELSSKQDYANYGLSYLIDYVHGKSQKKPEL 62

Query: 242 LQEQLKLPGKTRNLLTYSGTPNLNGLKDI--------------VLPTGLGMLASDKPQRP 287
           LQEQLKL GK+ NL+TY GTPNL GLKDI              V+P   GM   ++ +RP
Sbjct: 63  LQEQLKLSGKSPNLITYKGTPNLMGLKDIAETLSASDRSASDSVMPD--GMDKREQQRRP 120

Query: 288 LLR 290
           LLR
Sbjct: 121 LLR 123


>Glyma02g02470.1 
          Length = 152

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 81/123 (65%), Gaps = 16/123 (13%)

Query: 182 VSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIETLHGNIGKMPEH 241
           V+GVRSTITD+H+DLG L+ +V+ LD +LA L   QD  NYG+ YLI+ +HG   K PE 
Sbjct: 3   VAGVRSTITDIHEDLGYLQQTVETLDYRLAELSSKQDYANYGLSYLIDYVHGKSQKKPEL 62

Query: 242 LQEQLKLPGKTRNLLTYSGTPNLNGLKDI--------------VLPTGLGMLASDKPQRP 287
           LQEQLKL GK+ NL+TY GTPNL GLKDI              V+P   GM   ++ +RP
Sbjct: 63  LQEQLKLSGKSPNLITYKGTPNLMGLKDIAETLSASDRSASDSVMPD--GMDKREQQRRP 120

Query: 288 LLR 290
           LLR
Sbjct: 121 LLR 123


>Glyma08g29150.1 
          Length = 351

 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 10/228 (4%)

Query: 8   GIGMSKILIIAGAGYTSTVLIKNGKLSDLIG----DLQALVKGLEKSGDQAEG--EGEYV 61
            + + K++I+  AG   +V+ K G+L D+ G      + +++ L KS D A    +  + 
Sbjct: 2   ALSLGKLVILVSAGIAGSVIAKEGRLPDVSGLASGAFKVVLRQL-KSDDPAPTVKKQPHN 60

Query: 62  DAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISF 121
           DA+ AQV  L  E++ LA +R IT+VN  SG G      +  + +  +GYGY+ WKG   
Sbjct: 61  DALLAQVNSLRQELQLLARDRSITIVNA-SGTGGRK--YITVIVIVVVGYGYVWWKGWKL 117

Query: 122 SDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDD 181
            DLM+ T+R +  A T +  ++  + + I D KK L+ RI  LD  + +   ++ S ++D
Sbjct: 118 PDLMFATRRGLSDACTSIGNQMGKLYESIGDTKKKLSARINGLDKNLEECAAITESTRED 177

Query: 182 VSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIE 229
           +S ++     + +D  S   +V  L+ K+  +   Q  T  GV  L +
Sbjct: 178 ISVIQRKADTISEDSKSFHVAVHVLESKIKEIEEKQVATIEGVNMLCQ 225


>Glyma08g29150.2 
          Length = 345

 Score = 85.5 bits (210), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 10/228 (4%)

Query: 8   GIGMSKILIIAGAGYTSTVLIKNGKLSDLIG----DLQALVKGLEKSGDQAEG--EGEYV 61
            + + K++I+  AG   +V+ K G+L D+ G      + +++ L KS D A    +  + 
Sbjct: 2   ALSLGKLVILVSAGIAGSVIAKEGRLPDVSGLASGAFKVVLRQL-KSDDPAPTVKKQPHN 60

Query: 62  DAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISF 121
           DA+ AQV  L  E++ LA +R IT+VN  SG G      +  + +  +GYGY+ WKG   
Sbjct: 61  DALLAQVNSLRQELQLLARDRSITIVNA-SGTGGRK--YITVIVIVVVGYGYVWWKGWKL 117

Query: 122 SDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDD 181
            DLM+ T+R +  A T +  ++  + + I D KK L+ RI  LD  + +   ++ S ++D
Sbjct: 118 PDLMFATRRGLSDACTSIGNQMGKLYESIGDTKKKLSARINGLDKNLEECAAITESTRED 177

Query: 182 VSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIE 229
           +S ++     + +D  S   +V  L+ K+  +   Q  T  GV  L +
Sbjct: 178 ISVIQRKADTISEDSKSFHVAVHVLESKIKEIEEKQVATIEGVNMLCQ 225


>Glyma08g29150.3 
          Length = 330

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 10/228 (4%)

Query: 8   GIGMSKILIIAGAGYTSTVLIKNGKLSDLIG----DLQALVKGLEKSGDQAEG--EGEYV 61
            + + K++I+  AG   +V+ K G+L D+ G      + +++ L KS D A    +  + 
Sbjct: 2   ALSLGKLVILVSAGIAGSVIAKEGRLPDVSGLASGAFKVVLRQL-KSDDPAPTVKKQPHN 60

Query: 62  DAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISF 121
           DA+ AQV  L  E++ LA +R IT+VN  SG G      +  + +  +GYGY+ WKG   
Sbjct: 61  DALLAQVNSLRQELQLLARDRSITIVNA-SGTGGRK--YITVIVIVVVGYGYVWWKGWKL 117

Query: 122 SDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDD 181
            DLM+ T+R +  A T +  ++  + + I D KK L+ RI  LD  + +   ++ S ++D
Sbjct: 118 PDLMFATRRGLSDACTSIGNQMGKLYESIGDTKKKLSARINGLDKNLEECAAITESTRED 177

Query: 182 VSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIE 229
           +S ++     + +D  S   +V  L+ K+  +   Q  T  GV  L +
Sbjct: 178 ISVIQRKADTISEDSKSFHVAVHVLESKIKEIEEKQVATIEGVNMLCQ 225


>Glyma18g52020.1 
          Length = 349

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 10/228 (4%)

Query: 8   GIGMSKILIIAGAGYTSTVLIKNGKLSDLIG----DLQALVKGLEKSGDQAEG--EGEYV 61
            + + K+ I+ GAG   +V+ K G+L D+ G      + +++ L KS D A    +  + 
Sbjct: 2   ALSLGKLFILVGAGIAGSVIAKEGRLPDVSGLASGAFKVVLRQL-KSDDPAPTVKKQPHN 60

Query: 62  DAIAAQVRRLANEVRQLASNRPITVVNGGSGQGNLPSLVVPAVALGALGYGYMRWKGISF 121
           DA+ AQV  L  E++ LA +R IT+VN  SG G         + +  +GYGY+ WKG   
Sbjct: 61  DALLAQVNSLRQELQLLARDRSITIVNA-SGTGG--RKYATVIVIVVVGYGYVWWKGWKL 117

Query: 122 SDLMYVTKRQMEKAVTDLNKKLHHVTDVIADVKKHLTQRIENLDDKMLKQNELSRSIKDD 181
            DLM+ T+R +  A T +  ++  + + I D KK L+ RI  LD  + +   ++ S +++
Sbjct: 118 PDLMFATRRGLSDACTSIGNQMGKLYESIGDTKKKLSARINGLDKNLEECAAITESTREE 177

Query: 182 VSGVRSTITDMHDDLGSLRYSVDKLDKKLATLCLNQDGTNYGVKYLIE 229
           +  ++     + +D  S   +V  L+ K+  +   Q  T  GV  L +
Sbjct: 178 IYVIQRKADTISEDSKSFHVAVHVLESKIKEIEEKQVATIEGVNMLCQ 225