Miyakogusa Predicted Gene
- Lj2g3v1277640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1277640.1 Non Chatacterized Hit- tr|A3A8B8|A3A8B8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.96,0.000000000001,Oxygen-evolving enhancer protein
3,,PsbQ-like domain; no description,NULL; seg,NULL;
PsbQ,Photosyste,CUFF.36655.1
(204 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g06110.1 254 4e-68
Glyma12g34320.1 66 3e-11
Glyma03g26740.1 65 6e-11
Glyma13g36240.1 62 4e-10
Glyma07g14340.2 62 5e-10
Glyma07g14340.1 62 5e-10
Glyma18g05320.1 50 1e-06
>Glyma01g06110.1
Length = 192
Score = 254 bits (649), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 154/205 (75%), Gaps = 14/205 (6%)
Query: 1 MSSFTHATTLLHAHIKTKQRNTSKSTNPL-PLINNQAPFSAEHNNDTTSRRKLISTFLTT 59
MSSFTHATTLLHAHIKTK + S +T PL +N +P +RRKLISTFL T
Sbjct: 1 MSSFTHATTLLHAHIKTKHKKPSTTTTTTTPLPHNHSP----------NRRKLISTFLAT 50
Query: 60 STXXXXXXXXXXXXXXXXXXXEKWGTRSFLKEHFFEPGLSPEDAVERIKQTAEGLHSMRD 119
ST + WGT SF+KEHFFEPGLSPEDAV RIKQTAEGLHS+R+
Sbjct: 51 STAALLVHGVTSTPQALA---QSWGTHSFIKEHFFEPGLSPEDAVARIKQTAEGLHSIRE 107
Query: 120 MLESMSWRYVMFYIRLKQSYLDQDLKNAITTLPENRKKEYVKTANDLVDNMAELDRHVRS 179
LE+MSWRY+MFYIR+KQ+YLDQDL+ A TTLPE+R+KEYVKTAN+LV N E DRH+R+
Sbjct: 108 ALETMSWRYIMFYIRIKQAYLDQDLRTAFTTLPESRRKEYVKTANELVSNFGEFDRHIRT 167
Query: 180 PKVYESYLYYERLLKSIDELVAILA 204
PKVYESYLYYE+ LKSID+LVAILA
Sbjct: 168 PKVYESYLYYEKTLKSIDQLVAILA 192
>Glyma12g34320.1
Length = 250
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 81 EKWGTRSFLKEHFFEPGLSPEDAVERIKQTAEGLHSMRDMLESMSWRYVMFYIRLKQSYL 140
EK GTRSFLK + + + +V RIK+ A L +M D++ + YV Y+RLK +++
Sbjct: 121 EKTGTRSFLKRGLYIANIGVKGSVFRIKKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFM 180
Query: 141 DQDLKNAITTLPENRKKEYVKTANDLVDNMAELDRHVRS---PKVYESYLYYERLLKSID 197
D I+ +P + K++ AN L DN L+ R P+ Y E +LK +
Sbjct: 181 YYDFDKVISAIPVDDKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVMLKEVM 240
Query: 198 ELVAIL 203
+ + I+
Sbjct: 241 DKMDIM 246
>Glyma03g26740.1
Length = 232
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 89 LKEHFFEPGLSPEDAVERIKQTAEGLHSMRDMLESMSWRYVMFYIRLKQSYLDQDLKNAI 148
LK+ FF LSP DA +R K++A+ + ++ ++E +W YV +RL+ YL DL I
Sbjct: 117 LKDRFFLQPLSPTDAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVI 176
Query: 149 TTLPENRKKEYVKTANDLVDNMAELDRHVRSPKVYESYLYYERLLKSIDELVAILA 204
P++ KK + L +++ LD + E+ YY + S+++++A L
Sbjct: 177 AAKPKDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKLG 232
>Glyma13g36240.1
Length = 233
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 82 KWGTRSFLKEHFFEPGLSPEDAVERIKQTAEGLHSMRDMLESMSWRYVMFYIRLKQSYLD 141
K GTRSFLK + + + +V RIK+ A L +M D++ + YV Y+RLK +++
Sbjct: 105 KTGTRSFLKRGIYIANIGVKGSVFRIKKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMY 164
Query: 142 QDLKNAITTLPENRKKEYVKTANDLVDNMAELDRHVRS---PKVYESYLYYERLLKSIDE 198
D I +P + K++ AN L DN L+ R P+ Y E +LK + +
Sbjct: 165 YDFDKIIPAIPVDDKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVMLKEVMD 224
Query: 199 LVAIL 203
+ I+
Sbjct: 225 RMDIM 229
>Glyma07g14340.2
Length = 234
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%)
Query: 89 LKEHFFEPGLSPEDAVERIKQTAEGLHSMRDMLESMSWRYVMFYIRLKQSYLDQDLKNAI 148
LK+ FF LSP +A +R K++A+ + ++ ++E +W YV +RL+ YL DL I
Sbjct: 119 LKDRFFLQPLSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVI 178
Query: 149 TTLPENRKKEYVKTANDLVDNMAELDRHVRSPKVYESYLYYERLLKSIDELVAILA 204
P++ KK + L +++ LD + E+ YY + S+++++A L
Sbjct: 179 AGKPKDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKLG 234
>Glyma07g14340.1
Length = 236
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%)
Query: 89 LKEHFFEPGLSPEDAVERIKQTAEGLHSMRDMLESMSWRYVMFYIRLKQSYLDQDLKNAI 148
LK+ FF LSP +A +R K++A+ + ++ ++E +W YV +RL+ YL DL I
Sbjct: 121 LKDRFFLQPLSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVI 180
Query: 149 TTLPENRKKEYVKTANDLVDNMAELDRHVRSPKVYESYLYYERLLKSIDELVAILA 204
P++ KK + L +++ LD + E+ YY + S+++++A L
Sbjct: 181 AGKPKDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKLG 236
>Glyma18g05320.1
Length = 200
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 93 FFEPGLSPEDAVERIKQTAEGLHSMRDMLESMSWRYVMFYIRLKQSYLDQDLKNAITTLP 152
F P ++ EDA+ ++ A+ L +RD+LE SWR +R + L +D+ I + P
Sbjct: 89 FVAPDMTVEDALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSAILKKDIYTIIQSKP 148
Query: 153 ENRKKEYVKTANDLVDNMAELDRHVR---SPKVYESYLYYERLLKSIDELVA 201
+ + K + L +N+ LD R P+V++ YE ++ +++++++
Sbjct: 149 GIERAQLRKLYSTLFNNVTRLDYAARDKDGPQVWQC---YENIVVAVNDILS 197