Miyakogusa Predicted Gene

Lj2g3v1277620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277620.1 Non Chatacterized Hit- tr|I3S5Q8|I3S5Q8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.87,2e-18,
,CUFF.36673.1
         (47 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g12210.2                                                        88   3e-18
Glyma02g12210.1                                                        88   3e-18
Glyma01g06140.1                                                        60   5e-10
Glyma06g21000.1                                                        50   6e-07
Glyma04g33280.1                                                        49   9e-07

>Glyma02g12210.2 
          Length = 207

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 44/47 (93%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQESKQKLIS 47
           M PFFVLLE LQTLFGYEPYPGF+S V+A++EANINEWQESKQKLIS
Sbjct: 161 MGPFFVLLEVLQTLFGYEPYPGFNSTVKAKVEANINEWQESKQKLIS 207


>Glyma02g12210.1 
          Length = 207

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 44/47 (93%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQESKQKLIS 47
           M PFFVLLE LQTLFGYEPYPGF+S V+A++EANINEWQESKQKLIS
Sbjct: 161 MGPFFVLLEVLQTLFGYEPYPGFNSTVKAKVEANINEWQESKQKLIS 207


>Glyma01g06140.1 
          Length = 142

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 3/40 (7%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQE 40
           M PFFVL+    TLFGYEPYP F+S V+A+IEANINEWQE
Sbjct: 105 MGPFFVLI---GTLFGYEPYPRFNSTVKAKIEANINEWQE 141


>Glyma06g21000.1 
          Length = 192

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 30/35 (85%), Gaps = 1/35 (2%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANI 35
           MAPFFVLLE LQ + GYEPYPGF++ V+A I+A+I
Sbjct: 147 MAPFFVLLEVLQFV-GYEPYPGFNTRVKARIDADI 180


>Glyma04g33280.1 
          Length = 191

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%), Gaps = 1/35 (2%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANI 35
           MAPFFVLLE LQ + GYEPYPGF + V+A I+A+I
Sbjct: 146 MAPFFVLLEVLQFV-GYEPYPGFKTRVKARIDADI 179