Miyakogusa Predicted Gene

Lj2g3v1242300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1242300.1 Non Chatacterized Hit- tr|G7JY31|G7JY31_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,71.8,0,DUF2828,Domain of unknown function DUF2828; FAMILY
NOT NAMED,NULL; coiled-coil,NULL,gene.g41110.t1.1
         (587 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g07690.1                                                       897   0.0  

>Glyma01g07690.1 
          Length = 646

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/604 (71%), Positives = 506/604 (83%), Gaps = 22/604 (3%)

Query: 1   MVANFNTLSTKPLPPMGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQAVTERLQLAWSHE 60
           MV  FNT+S+ P P M  TEN SPTF ++GNPCLDFFFHVVPDTPP+ + +RL+LAW+  
Sbjct: 48  MVVKFNTMSSPPPPNMTLTENMSPTFFTTGNPCLDFFFHVVPDTPPETILQRLELAWALN 107

Query: 61  PLTTLKLVCNLRGVRGTGKSDREGFYAAAHWLHHHHPKTLASNVPSLAEFGYFKDLLEVL 120
           PLT LKLVCNLRGVRGTGKSDR+ FY AA WLH  HPKTLA+NV SLAEFGYFKDL E+L
Sbjct: 108 PLTALKLVCNLRGVRGTGKSDRQSFYPAALWLHRRHPKTLAANVSSLAEFGYFKDLPEIL 167

Query: 121 YRLIEGPEVRTIQREEWKQRKRSFGYYHHNPETPFGIRKTTGEDAKAKKERI-------- 172
           Y L+EG + R +Q+E W+ RKR     H+N +     +K      K+  +R+        
Sbjct: 168 YLLLEGSDARKVQKEAWQNRKRG---AHNNKKKNPRTQKMQKVKTKSLAQRVNVEKEKES 224

Query: 173 ------HAAREERRLAMAKKLIDRYNTDPVFRSLHDCVSDHFAECLKKDMEFLKSGQVTK 226
                 H AREE+R+A+AKKL++RY  DP FR LHD VSD+FAECL+KD EFLKSG VTK
Sbjct: 225 SEKEIAHVAREEKRVALAKKLVERYAKDPDFRFLHDRVSDYFAECLRKDHEFLKSGLVTK 284

Query: 227 ISLAAKWCPSVDSSFDRSILLCESVARRMFPRDEY---EGVEEAHYAFRIRDRLRKEVLV 283
           +SLAAKWCPSVDSSFDR  LLCE++ +R+FPRDEY   EGVEEA+YA+R+RDRLRKEVLV
Sbjct: 285 VSLAAKWCPSVDSSFDRHTLLCETIGKRVFPRDEYKEYEGVEEAYYAYRVRDRLRKEVLV 344

Query: 284 PLRKALELPEVYIGANQWDVLPYNRVASLAMEFYKEKFLKHDKERFEKYLEDVKSGSGKA 343
           PLRK LELPEV+IGAN+WD++PYNRVAS+AM+FYKEKFLKHDKERFE YLEDVKSG  K+
Sbjct: 345 PLRKVLELPEVFIGANRWDLIPYNRVASVAMKFYKEKFLKHDKERFEAYLEDVKSG--KS 402

Query: 344 TIAAGALLPHQIIKSVWDGDGREVAELQWKRMVDDLLKEGKMKNCIAVCDVSGSMDGTPI 403
           TIAAGALLPHQII S+ DGDG +VAELQWKR+VDDLLK+GKMKNC+AVCDVSGSM G P+
Sbjct: 403 TIAAGALLPHQIIGSLNDGDGGDVAELQWKRIVDDLLKKGKMKNCLAVCDVSGSMSGVPM 462

Query: 404 QVSLALGMLVSELSEEPWKGKFITFSKRPQLHLIKGDDLYSKTKFMEDVQWDLNTDFQKV 463
           +VS+ALG+LVSEL EEPWKGK +TFS+ PQLHLI+GDDL SKT+F+ +++W +NTDFQKV
Sbjct: 463 EVSVALGLLVSELCEEPWKGKVVTFSENPQLHLIEGDDLGSKTEFIRNMEWGMNTDFQKV 522

Query: 464 FDLILEVAVNGNLKEDQMIKRVFVFSDMEFDQASLNPWETDYQAITRKYNEKGYGSAVPQ 523
           FDL+LEVAV+GNLK DQMIKR+FVFSDMEFDQAS NPWETDYQAITRK+ EKG+G AVPQ
Sbjct: 523 FDLLLEVAVSGNLKPDQMIKRLFVFSDMEFDQASANPWETDYQAITRKFGEKGFGDAVPQ 582

Query: 524 IVFWNLRDSRATPVPATQKGVALVSGFSKNLLKLFINNDGVLNPEEAMEAAISGQEYQNL 583
           IVFWNLRDS+ATPVPATQKGVAL+SGFSKNLL LF++ +G L+PEEAMEAAISG EYQ L
Sbjct: 583 IVFWNLRDSKATPVPATQKGVALLSGFSKNLLTLFLDKEGELSPEEAMEAAISGPEYQKL 642

Query: 584 VVLD 587
           VVLD
Sbjct: 643 VVLD 646