Miyakogusa Predicted Gene

Lj2g3v1242280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1242280.1 Non Chatacterized Hit- tr|J3LA67|J3LA67_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G1,37.7,2e-17,FAMILY NOT NAMED,NULL; vWA-like,NULL;
coiled-coil,NULL; DUF2828,Domain of unknown function DUF2828;
,gene.g41109.t1.1
         (625 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g07690.1                                                       886   0.0  

>Glyma01g07690.1 
          Length = 646

 Score =  886 bits (2290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/644 (67%), Positives = 509/644 (79%), Gaps = 23/644 (3%)

Query: 3   TLLGPPELY----------------AGKPTTATTTASDPFIDLMVANFNTLSTKPLPPMG 46
           TL+GPPELY                    T   TT  DPFID MV  FNT+S+ P P M 
Sbjct: 5   TLIGPPELYNPYPTQTPAPTPTPTPTQPQTVTRTTPIDPFIDQMVVKFNTMSSPPPPNMT 64

Query: 47  FTENNSPTFLSSGNPCLDFFFHVVPDTPHQTITHLLQLAWSENPLTALKLVCNLRGVRGT 106
            TEN SPTF ++GNPCLDFFFHVVPDTP +TI   L+LAW+ NPLTALKLVCNLRGVRGT
Sbjct: 65  LTENMSPTFFTTGNPCLDFFFHVVPDTPPETILQRLELAWALNPLTALKLVCNLRGVRGT 124

Query: 107 GKSDREGFYAAAHWLHNHHPKTLTSNLPSLAEFGYFKDLLEILYRVLEGPDVRETQKE-- 164
           GKSDR+ FY AA WLH  HPKTL +N+ SLAEFGYFKDL EILY +LEG D R+ QKE  
Sbjct: 125 GKSDRQSFYPAALWLHRRHPKTLAANVSSLAEFGYFKDLPEILYLLLEGSDARKVQKEAW 184

Query: 165 ERYCYGSRESRDPPPIFGMRNARREQXXXXXXXXXXLEMDXXXXXXXXXXXXXXXXLAMA 224
           +    G+  ++   P    +  ++ +           +                  +A+A
Sbjct: 185 QNRKRGAHNNKKKNP--RTQKMQKVKTKSLAQRVNVEKEKESSEKEIAHVAREEKRVALA 242

Query: 225 KKLLDRYNSDPVFQFLHDRVSDHFAECLKRDMEFLSSGQVTKISLAAKWCPSLDSSFDRS 284
           KKL++RY  DP F+FLHDRVSD+FAECL++D EFL SG VTK+SLAAKWCPS+DSSFDR 
Sbjct: 243 KKLVERYAKDPDFRFLHDRVSDYFAECLRKDHEFLKSGLVTKVSLAAKWCPSVDSSFDRH 302

Query: 285 ILLCESVARRLFPREEY---EGVEEAHYAYRIRERLRKEVLVPLRKALELPEVYIGVNRW 341
            LLCE++ +R+FPR+EY   EGVEEA+YAYR+R+RLRKEVLVPLRK LELPEV+IG NRW
Sbjct: 303 TLLCETIGKRVFPRDEYKEYEGVEEAYYAYRVRDRLRKEVLVPLRKVLELPEVFIGANRW 362

Query: 342 DLIPYNRVASLAMEFYSEKFLKHDKERFEKYLEDVKSGKATIAAGALLPDQIIKSVWDGD 401
           DLIPYNRVAS+AM+FY EKFLKHDKERFE YLEDVKSGK+TIAAGALLP QII S+ DGD
Sbjct: 363 DLIPYNRVASVAMKFYKEKFLKHDKERFEAYLEDVKSGKSTIAAGALLPHQIIGSLNDGD 422

Query: 402 GREVAELQWKRMVDDLLKEGKMKNCIAVCDVSGSMDGTPIQVSLALGMLVSELSEEPWKG 461
           G +VAELQWKR+VDDLLK+GKMKNC+AVCDVSGSM G P++VS+ALG+LVSEL EEPWKG
Sbjct: 423 GGDVAELQWKRIVDDLLKKGKMKNCLAVCDVSGSMSGVPMEVSVALGLLVSELCEEPWKG 482

Query: 462 KFITFSERPQLHLIKGDNLHSKTRFMEDLEWDMNTDFQKVFDLILEVAVNGNLKEDQMIK 521
           K +TFSE PQLHLI+GD+L SKT F+ ++EW MNTDFQKVFDL+LEVAV+GNLK DQMIK
Sbjct: 483 KVVTFSENPQLHLIEGDDLGSKTEFIRNMEWGMNTDFQKVFDLLLEVAVSGNLKPDQMIK 542

Query: 522 RVFVFSDMEFDEASANPWETDYQAITRKYNEEGYGSAVPQIVFWNLRDSRATPVPATQKG 581
           R+FVFSDMEFD+ASANPWETDYQAITRK+ E+G+G AVPQIVFWNLRDS+ATPVPATQKG
Sbjct: 543 RLFVFSDMEFDQASANPWETDYQAITRKFGEKGFGDAVPQIVFWNLRDSKATPVPATQKG 602

Query: 582 VALVSGFSKNLLKLFINNDGDLCPEEAMEAAISGREYQKLVVLD 625
           VAL+SGFSKNLL LF++ +G+L PEEAMEAAISG EYQKLVVLD
Sbjct: 603 VALLSGFSKNLLTLFLDKEGELSPEEAMEAAISGPEYQKLVVLD 646