Miyakogusa Predicted Gene

Lj2g3v1203450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1203450.1 tr|I3T8R8|I3T8R8_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=4
SV=1,95.45,3e-17,FKBP_PPIASE,Peptidyl-prolyl cis-trans isomerase,
FKBP-type, domain; FKBP_C,Peptidyl-prolyl cis-trans,CUFF.36495.1
         (46 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g10730.2                                                        70   6e-13
Glyma16g10730.1                                                        70   6e-13
Glyma03g21690.1                                                        68   2e-12
Glyma08g46090.2                                                        68   3e-12
Glyma08g46090.1                                                        68   3e-12
Glyma18g32830.1                                                        65   2e-11
Glyma05g28260.1                                                        63   5e-11
Glyma08g11240.1                                                        62   1e-10
Glyma07g20830.1                                                        60   6e-10

>Glyma16g10730.2 
          Length = 564

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          EAGDEV VHYTGTLLDGTKFDSSR R  PF+FTLGQ
Sbjct: 56 EAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQ 91


>Glyma16g10730.1 
          Length = 574

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          EAGDEV VHYTGTLLDGTKFDSSR R  PF+FTLGQ
Sbjct: 56 EAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQ 91


>Glyma03g21690.1 
          Length = 582

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/36 (83%), Positives = 31/36 (86%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          E GDEV VHYTGTLLDGTKFDSSR R  PF+FTLGQ
Sbjct: 64 EVGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQ 99


>Glyma08g46090.2 
          Length = 544

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/36 (83%), Positives = 31/36 (86%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          E GDEV VHYTGTLLDGTKFDSSR R  PF+FTLGQ
Sbjct: 46 EVGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQ 81


>Glyma08g46090.1 
          Length = 544

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/36 (83%), Positives = 31/36 (86%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          E GDEV VHYTGTLLDGTKFDSSR R  PF+FTLGQ
Sbjct: 46 EVGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQ 81


>Glyma18g32830.1 
          Length = 544

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/36 (80%), Positives = 30/36 (83%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          E GDEV  HYTGTLLDGTKFDSSR R  PF+FTLGQ
Sbjct: 46 EVGDEVQGHYTGTLLDGTKFDSSRDRDSPFSFTLGQ 81


>Glyma05g28260.1 
          Length = 570

 Score = 63.2 bits (152), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/36 (75%), Positives = 30/36 (83%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          ++GD+V VHYTGTLLDGTKFDSSR R  PF F LGQ
Sbjct: 54 DSGDQVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGQ 89


>Glyma08g11240.1 
          Length = 570

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/36 (75%), Positives = 29/36 (80%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          + GD+V VHYTGTLLDGTKFDSSR R  PF F LGQ
Sbjct: 54 DCGDQVEVHYTGTLLDGTKFDSSRDRGTPFKFRLGQ 89


>Glyma07g20830.1 
          Length = 144

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 28/36 (77%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          + GD+V VHYTGTLLDGTKFD SR R  PF F LGQ
Sbjct: 54 DCGDQVEVHYTGTLLDGTKFDYSRDRGTPFKFRLGQ 89