Miyakogusa Predicted Gene

Lj2g3v1196740.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1196740.1 Non Chatacterized Hit- tr|I1LTT3|I1LTT3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2256
PE=,72.17,2e-19,seg,NULL; Ribosomal_60s,Ribosomal protein 60S; 60S
ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER,NULL,CUFF.36614.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g37780.1                                                        82   2e-16
Glyma12g30800.1                                                        81   3e-16
Glyma03g35080.1                                                        80   4e-16
Glyma13g39490.1                                                        80   4e-16
Glyma12g30800.3                                                        80   7e-16
Glyma10g07850.2                                                        78   2e-15
Glyma10g07850.1                                                        78   2e-15
Glyma0169s00200.2                                                      77   4e-15
Glyma0169s00200.1                                                      77   4e-15
Glyma12g30800.2                                                        71   2e-13

>Glyma19g37780.1 
          Length = 143

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 47/62 (75%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKV+AAYLLAVLGGN++PSADDL+ ILGSVG             EVKGKD AELIA+GRE
Sbjct: 31 MKVIAAYLLAVLGGNAAPSADDLRTILGSVGADANDDNISNFLSEVKGKDIAELIAAGRE 90

Query: 61 KL 62
          KL
Sbjct: 91 KL 92


>Glyma12g30800.1 
          Length = 156

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 46/62 (74%)

Query: 1   MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
           MKVVAAYLLAVLGGN SPSADD+K+ILG+VG             EVKGKDF ELIASG E
Sbjct: 46  MKVVAAYLLAVLGGNPSPSADDIKHILGAVGAEAENELIELLLTEVKGKDFNELIASGSE 105

Query: 61  KL 62
           K+
Sbjct: 106 KM 107


>Glyma03g35080.1 
          Length = 113

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 47/62 (75%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKV+AAYLLAVLGGN++PSADDL++ILGSVG             EVKGKD  ELIASGRE
Sbjct: 1  MKVIAAYLLAVLGGNAAPSADDLRDILGSVGADANDDNISNFLSEVKGKDIVELIASGRE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma13g39490.1 
          Length = 114

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 46/62 (74%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKVVAAYLLAVLGGN SPSADD+KNILG+VG             EVKGKDF EL+ASG E
Sbjct: 1  MKVVAAYLLAVLGGNPSPSADDIKNILGAVGAEAEHELIELLLTEVKGKDFNELLASGSE 60

Query: 61 KL 62
          K+
Sbjct: 61 KI 62


>Glyma12g30800.3 
          Length = 111

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 46/62 (74%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKVVAAYLLAVLGGN SPSADD+K+ILG+VG             EVKGKDF ELIASG E
Sbjct: 1  MKVVAAYLLAVLGGNPSPSADDIKHILGAVGAEAENELIELLLTEVKGKDFNELIASGSE 60

Query: 61 KL 62
          K+
Sbjct: 61 KM 62


>Glyma10g07850.2 
          Length = 114

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 46/62 (74%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKVVAAYLLAVLGGN++PSADD+K ILGSVG             EVKGKD  ELIA+G+E
Sbjct: 1  MKVVAAYLLAVLGGNNTPSADDIKEILGSVGIEADEDRIESFLSEVKGKDIVELIAAGKE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma10g07850.1 
          Length = 114

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 46/62 (74%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKVVAAYLLAVLGGN++PSADD+K ILGSVG             EVKGKD  ELIA+G+E
Sbjct: 1  MKVVAAYLLAVLGGNNTPSADDIKEILGSVGIEADEDRIESFLSEVKGKDIVELIAAGKE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma0169s00200.2 
          Length = 114

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 45/62 (72%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKVVAAYLLAVLGGN+SPSAD +K ILGSVG             EVKGKD  ELIA+GRE
Sbjct: 1  MKVVAAYLLAVLGGNNSPSADVIKEILGSVGVEADEDRIESFLSEVKGKDIVELIAAGRE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma0169s00200.1 
          Length = 114

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 45/62 (72%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKVVAAYLLAVLGGN+SPSAD +K ILGSVG             EVKGKD  ELIA+GRE
Sbjct: 1  MKVVAAYLLAVLGGNNSPSADVIKEILGSVGVEADEDRIESFLSEVKGKDIVELIAAGRE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma12g30800.2 
          Length = 109

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 44/62 (70%), Gaps = 2/62 (3%)

Query: 1  MKVVAAYLLAVLGGNSSPSADDLKNILGSVGXXXXXXXXXXXXKEVKGKDFAELIASGRE 60
          MKVVAAYLLAVLGGN SPSADD+K+ILG+               EVKGKDF ELIASG E
Sbjct: 1  MKVVAAYLLAVLGGNPSPSADDIKHILGAA--EAENELIELLLTEVKGKDFNELIASGSE 58

Query: 61 KL 62
          K+
Sbjct: 59 KM 60