Miyakogusa Predicted Gene

Lj2g3v1196400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1196400.1 tr|Q9LI86|Q9LI86_ARATH At3g25590 OS=Arabidopsis
thaliana GN=At3g25590 PE=2 SV=1,31.81,9e-19,seg,NULL,gene.g41000.t1.1
         (317 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g14250.1                                                       308   4e-84
Glyma04g22800.1                                                       186   4e-47

>Glyma02g14250.1 
          Length = 372

 Score =  308 bits (790), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 198/335 (59%), Positives = 215/335 (64%), Gaps = 51/335 (15%)

Query: 1   MISSNRNSCSTVEVGSVGRVSFLIENEKNVE-TPV--QHLNAKATKLQDKTGEKTEEVVV 57
           M+SS+RNSC TVEVG VGRVSFLIENEKN E TPV  QHLN      +    E+ +EV+ 
Sbjct: 71  MVSSHRNSC-TVEVGGVGRVSFLIENEKNNESTPVVLQHLNHNKANKE----EEEDEVLG 125

Query: 58  LRRSNSNCVEIKRNG------FWRFGKLFRXXXXXXXXCGRSVGGFDERN-EMWMVDHHG 110
           LRRS+S+CVEIKR+       FW+ GKLFR        CGRSV GFDERN EMWMVDH G
Sbjct: 126 LRRSSSSCVEIKRHHHGGGGGFWKIGKLFRKKKEKG--CGRSVVGFDERNNEMWMVDHQG 183

Query: 111 GVSRSRSLCSFRGGGNGIFGSEDGGDSVLXXXXXXXXXXXXXXVNGGMMLESGRRSGYSE 170
           GVSRSRSLCSFRGGG  IFGSEDGGDSVL              VN   MLESGRRSGYSE
Sbjct: 184 GVSRSRSLCSFRGGG--IFGSEDGGDSVLSGARSSISAARSSGVN---MLESGRRSGYSE 238

Query: 171 AEPRRSDFMMFESENGGRKSGLTDVDASFYNRRVF--------SLRESDFKGMDESSFID 222
           AEPRRS F      +G  +    D+                     ESDFKGMDESSFID
Sbjct: 239 AEPRRSGF------DGVERRDFFDLKGGVKKGGGLMDGVGDGGGFYESDFKGMDESSFID 292

Query: 223 LKLDYSSSEAKPEFSAAKFGNMADTLSAFGSVRGGNFMVHDGDGVLNSGGSCRITVNDRG 282
           LKLDYSS E+K EFSAAK  N    L               GDGVL +GGSCRITVNDRG
Sbjct: 293 LKLDYSS-ESKHEFSAAKMSNNMGGLV--------------GDGVLTNGGSCRITVNDRG 337

Query: 283 VKRGRKSMKGWRWIFRTHSNIASGRKKDEDLMFKT 317
           +KRGRKSMKGWRWIFR HSN  S RK+DED MFK 
Sbjct: 338 IKRGRKSMKGWRWIFRYHSNWGSSRKRDEDFMFKA 372


>Glyma04g22800.1 
          Length = 187

 Score =  186 bits (471), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/191 (60%), Positives = 125/191 (65%), Gaps = 36/191 (18%)

Query: 159 MLESGRRSGYSEAEPRRSDF-------MMFESENGGR--KSGLTDVDASF---------- 199
           MLESGRRSGYSEAEPRRS F        +F+S   G   K G+                 
Sbjct: 1   MLESGRRSGYSEAEPRRSGFDGVERRDFLFDSYESGNDLKGGVKKGGLMDGGGDGGGFYG 60

Query: 200 -YNRRVFSLRESDFKGMDESSFIDLKLDYSSSEAKPEFSAAKFGNM--ADTLSAFGSVRG 256
             NRRVFSLRESDFKGMDESSFIDLKLDYSS E+K EFSAAK  N    DT S+F   R 
Sbjct: 61  GVNRRVFSLRESDFKGMDESSFIDLKLDYSS-ESKHEFSAAKMSNNMGGDTFSSF---RN 116

Query: 257 GNFMVHD----------GDGVLNSGGSCRITVNDRGVKRGRKSMKGWRWIFRTHSNIASG 306
           GNFM HD          GDGVL +GGSCR+TVNDRG+KRGRKSMKGWRWIFR HSN  S 
Sbjct: 117 GNFMPHDVGGGSYGGLVGDGVLTNGGSCRLTVNDRGIKRGRKSMKGWRWIFRYHSNWGSS 176

Query: 307 RKKDEDLMFKT 317
           RK+DED MFK 
Sbjct: 177 RKRDEDFMFKA 187