Miyakogusa Predicted Gene

Lj2g3v1155600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1155600.1 Non Chatacterized Hit- tr|I1L4D0|I1L4D0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,64.29,3e-19,seg,NULL; HEAVY METAL TRANSPORT/DETOXIFICATION
PROTEIN,NULL; COPPER TRANSPORT PROTEIN ATOX1-RELATED,,CUFF.36324.1
         (105 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g20800.1                                                       104   2e-23
Glyma09g31730.1                                                        89   1e-18
Glyma07g10040.1                                                        84   3e-17
Glyma05g21340.1                                                        80   4e-16

>Glyma01g20800.1 
          Length = 85

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/79 (68%), Positives = 59/79 (74%), Gaps = 2/79 (2%)

Query: 25  YCCMIMRINVDCNACCXXXXXXXXXMKVIETHLIEKQQRRVCVCGRFVPADVAIKIQKKL 84
           YCCM+MRINVDCN+CC         MK IE H+IEKQQRRV V GRF P DVAIKI+KK+
Sbjct: 1   YCCMVMRINVDCNSCCRKLRRIILRMKAIENHMIEKQQRRVFVFGRFEPGDVAIKIKKKM 60

Query: 85  NRRVEILEVQFEGEEDHNE 103
           NRRVEILEVQ    EDH E
Sbjct: 61  NRRVEILEVQ--EMEDHKE 77


>Glyma09g31730.1 
          Length = 107

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 51/70 (72%)

Query: 25 YCCMIMRINVDCNACCXXXXXXXXXMKVIETHLIEKQQRRVCVCGRFVPADVAIKIQKKL 84
          Y CM+MRIN+DCN C          M  ++THL+EK Q RV VCGRF+P DVAI+I+KK 
Sbjct: 1  YFCMVMRINIDCNGCYRKVKRALLDMPELDTHLLEKNQTRVVVCGRFIPQDVAIRIKKKT 60

Query: 85 NRRVEILEVQ 94
          NRRVEIL++Q
Sbjct: 61 NRRVEILDIQ 70


>Glyma07g10040.1 
          Length = 100

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 50/73 (68%)

Query: 28  MIMRINVDCNACCXXXXXXXXXMKVIETHLIEKQQRRVCVCGRFVPADVAIKIQKKLNRR 87
           M+MRIN+DCN C          M  ++THL+EK Q RV VCGRF+P DVAI I+KK NRR
Sbjct: 1   MVMRINIDCNGCYRKVKRALLDMPELDTHLLEKNQTRVIVCGRFIPRDVAIMIRKKTNRR 60

Query: 88  VEILEVQFEGEED 100
           VEIL++Q   E +
Sbjct: 61  VEILDIQDLSESN 73


>Glyma05g21340.1 
          Length = 103

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 25 YCCMIMRINVDCNACCXXXXXXXXXMKVIETHLIEKQQRRVCVCGRFVPADVAIKIQKKL 84
          Y CM+MRIN+D N C          M  ++THL+EK Q R  VCGRF+P DVAIKI+KK 
Sbjct: 1  YFCMVMRINIDYNGCYIKVKRALLDMP-LDTHLLEKNQTRAIVCGRFIPQDVAIKIRKKT 59

Query: 85 NRRVEILE 92
          NRRVEIL+
Sbjct: 60 NRRVEILD 67