Miyakogusa Predicted Gene

Lj2g3v1108490.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1108490.3 tr|B9HBI4|B9HBI4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_763645 PE=4 SV=1,65.85,0.00004,
,CUFF.36277.3
         (65 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g00590.1                                                        50   6e-07
Glyma08g23820.1                                                        50   6e-07
Glyma13g04480.1                                                        49   1e-06
Glyma19g01560.1                                                        47   5e-06

>Glyma07g00590.1 
          Length = 692

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 30/43 (69%)

Query: 19  FCLCLPAILTSNIAFSKKANFIFLFFLLRKIVQHLVMMRLFVV 61
           F LCLPAI+TS IAF KK N IFLFFLLRK++       LF +
Sbjct: 470 FRLCLPAIITSKIAFWKKTNLIFLFFLLRKLILPFYSFTLFCI 512


>Glyma08g23820.1 
          Length = 666

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 30/43 (69%)

Query: 19  FCLCLPAILTSNIAFSKKANFIFLFFLLRKIVQHLVMMRLFVV 61
           F LCLPAI+TS IAF KK N IFLFFLLRK++       LF +
Sbjct: 444 FRLCLPAIITSKIAFWKKTNLIFLFFLLRKLILPFYSFTLFCI 486


>Glyma13g04480.1 
          Length = 660

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 30/43 (69%)

Query: 19  FCLCLPAILTSNIAFSKKANFIFLFFLLRKIVQHLVMMRLFVV 61
           F LCLPAILTS I+  KKAN IFLFFLLRK++       LF +
Sbjct: 438 FRLCLPAILTSKISVWKKANLIFLFFLLRKLILPFYSFTLFCI 480


>Glyma19g01560.1 
          Length = 660

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 29/43 (67%)

Query: 19  FCLCLPAILTSNIAFSKKANFIFLFFLLRKIVQHLVMMRLFVV 61
           F LCLPAILTS I+  KK N IFLFFLLRK++       LF +
Sbjct: 438 FRLCLPAILTSKISVWKKTNLIFLFFLLRKLILPFYSFTLFCI 480