Miyakogusa Predicted Gene

Lj2g3v1106430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1106430.1 Non Chatacterized Hit- tr|I1LWW8|I1LWW8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,70.97,2e-17,seg,NULL,NODE_55472_length_773_cov_55.467010.path1.1
         (85 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g04900.1                                                       129   5e-31
Glyma18g51140.1                                                       107   2e-24
Glyma13g06890.1                                                        72   1e-13
Glyma08g28090.1                                                        61   3e-10

>Glyma19g04900.1 
          Length = 378

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/85 (72%), Positives = 69/85 (81%)

Query: 1   MDVRENSRSIDYKEKPSATSDQKEKSRANIXXXXXXXXXXXXPEKAYNGSDMPEKARNSI 60
           MD REN +SID KEKPSA++D KEKSRA++            PEK+YNGSD+PEKARNSI
Sbjct: 294 MDQRENLKSIDQKEKPSASTDHKEKSRASVDRRDKSRKSIDRPEKSYNGSDIPEKARNSI 353

Query: 61  DRFGEMVRSVGLCNIDCFRPTATHA 85
           DRFGEMVRSVGLCNIDCFRPTATHA
Sbjct: 354 DRFGEMVRSVGLCNIDCFRPTATHA 378


>Glyma18g51140.1 
          Length = 380

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 1   MDVREN-SRSIDYKEKPSATSDQKEKSRANIXXXXXXXXXXXXPEKAYNGSDMPEKARNS 59
           MD+REN  RSID+KEKP  +++ KE SRA               EKAY G+++PEKARNS
Sbjct: 295 MDLRENLRRSIDFKEKPRTSTNHKETSRAGPDKKDKSRKSVDRSEKAYIGAEIPEKARNS 354

Query: 60  IDRFGEMVRSVGLCNIDCFRPTATHA 85
           IDRFG+MVRSVGLCNIDCFRP ATHA
Sbjct: 355 IDRFGDMVRSVGLCNIDCFRPRATHA 380


>Glyma13g06890.1 
          Length = 336

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 46/61 (75%)

Query: 1   MDVRENSRSIDYKEKPSATSDQKEKSRANIXXXXXXXXXXXXPEKAYNGSDMPEKARNSI 60
           MD +EN +SID KEKPSA++D+KEKSRA++            PEK++NGSD+PEKARNSI
Sbjct: 275 MDQKENLKSIDQKEKPSASTDRKEKSRASVDRRDKSRNSIDHPEKSFNGSDIPEKARNSI 334

Query: 61  D 61
           D
Sbjct: 335 D 335


>Glyma08g28090.1 
          Length = 412

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 1   MDVREN-SRSIDYKEKPSATSDQKEKSRANIXXXXXXXXXXXXPEKAYNGSDMPEKARNS 59
           MD+RE   RSID+KEKP  ++D KEKSRA               EKA NG+++PEKARNS
Sbjct: 295 MDLRETLRRSIDFKEKPRTSTDHKEKSRAGPDKKDKSRKSVDRSEKACNGAEIPEKARNS 354

Query: 60  IDR 62
           IDR
Sbjct: 355 IDR 357