Miyakogusa Predicted Gene

Lj2g3v1079650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1079650.1 tr|B9H443|B9H443_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_759466 PE=4 SV=1,50.47,3e-18,
,CUFF.36215.1
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g06190.1                                                       128   2e-30
Glyma01g21530.1                                                       120   3e-28
Glyma13g06190.2                                                        99   1e-21

>Glyma13g06190.1 
          Length = 128

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 6/129 (4%)

Query: 2   EDTTLKTPPKIPIEAQSTEPECKXXXXXXXXXXXXXXXSTDELRKSLIPDPLRVPKAFKF 61
           ++  LKTPPK+PI+ ++ EPECK               S++ELRK + PD LRVPKAFK+
Sbjct: 3   KENMLKTPPKVPIQDRTPEPECKTPTPVQQQDPNDHN-SSNELRKPVTPDRLRVPKAFKY 61

Query: 62  PERYTSPTDSIMSPVTKGLLARGKK-GVAKLPP-GKYHPKIPDMSLQEVGPFQNNKVPIP 119
           PERYTSPTD +MSPVTKGLLAR ++ G A LPP GK  PKI DM L++VGP QN    +P
Sbjct: 62  PERYTSPTDLMMSPVTKGLLARTRRGGGAVLPPGGKNRPKILDMPLKDVGPIQNK---LP 118

Query: 120 MLIDERINS 128
           MLIDE+INS
Sbjct: 119 MLIDEKINS 127


>Glyma01g21530.1 
          Length = 127

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/129 (55%), Positives = 90/129 (69%), Gaps = 7/129 (5%)

Query: 2   EDTTLKTPPKIPIEAQSTEPECKXXXXXXXXXXXXXXXSTDELRKSLIPDPLRVPKAFKF 61
           ++  LKTPPK+PI+ ++ EPECK               S++ELRK + PD LRVPKAFK+
Sbjct: 3   KENMLKTPPKVPIQDRTPEPECKTPTPLQQDPNDHN--SSNELRKPVTPDRLRVPKAFKY 60

Query: 62  PERYTSPTDSIMSPVTKGLLARGKK-GVAKLPP-GKYHPKIPDMSLQEVGPFQNNKVPIP 119
            ERYTSPTD +MSPVTKGL A+ ++ G A LPP GK  PKI D+ L++VGP QN    +P
Sbjct: 61  AERYTSPTDLMMSPVTKGLFAKTRRDGGAVLPPGGKNRPKILDLPLKDVGPIQNK---LP 117

Query: 120 MLIDERINS 128
           MLIDE+INS
Sbjct: 118 MLIDEKINS 126


>Glyma13g06190.2 
          Length = 107

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 71/101 (70%), Gaps = 3/101 (2%)

Query: 2   EDTTLKTPPKIPIEAQSTEPECKXXXXXXXXXXXXXXXSTDELRKSLIPDPLRVPKAFKF 61
           ++  LKTPPK+PI+ ++ EPECK               S++ELRK + PD LRVPKAFK+
Sbjct: 3   KENMLKTPPKVPIQDRTPEPECKTPTPVQQQDPNDHN-SSNELRKPVTPDRLRVPKAFKY 61

Query: 62  PERYTSPTDSIMSPVTKGLLARGKK-GVAKLPP-GKYHPKI 100
           PERYTSPTD +MSPVTKGLLAR ++ G A LPP GK  PK+
Sbjct: 62  PERYTSPTDLMMSPVTKGLLARTRRGGGAVLPPGGKNRPKV 102