Miyakogusa Predicted Gene

Lj2g3v1058030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1058030.1 Non Chatacterized Hit- tr|I1LWJ9|I1LWJ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.66,0,SUV3_C,Mitochondrial degradasome RNA helicase subunit,
C-terminal domain; Helicase_C,Helicase, C-ter,CUFF.36073.1
         (833 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g05330.1                                                      1258   0.0  
Glyma19g02570.1                                                      1245   0.0  
Glyma11g00970.1                                                       393   e-109
Glyma01g44610.1                                                       290   3e-78

>Glyma13g05330.1 
          Length = 804

 Score = 1258 bits (3254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/834 (75%), Positives = 684/834 (82%), Gaps = 65/834 (7%)

Query: 1   MARGPASSLFHLCTRKRTLSRFKALLF-NHSHPSPSQFH----PVRPFSTHLQNRRFLPS 55
           MARG    LFHLCTRKR LS+ +ALLF NHS     QFH    PV P ST   N    P 
Sbjct: 1   MARG----LFHLCTRKRILSKLQALLFINHS-----QFHTFQNPVSPISTRFSNPLLRPR 51

Query: 56  FHQSLNLSGGRTNPTRPFSTDGEEGDGTVTPDSDFDADFGKNADFELGNEVNDGVCALSD 115
           F QS  L G R  PTRPFS  G EG  T TP+ +F        DFELG+E ND       
Sbjct: 52  FSQSSKLPGERFRPTRPFSAAGNEGGATETPEGEF------KTDFELGDESND------- 98

Query: 116 NVDAANDGNDECSNEIVESVE---------FCNGSDSEEGGELVRESQEFVHVASRDPVE 166
                      C+ EIV+S E            G  S+   EL ++S+EF+HVASRDPVE
Sbjct: 99  -----------CNLEIVDSAECSSSSNNGGGGGGGGSDTNNELGKKSEEFMHVASRDPVE 147

Query: 167 LYRELVSVEKGVKLNRYDVESLQEVFRCLAESGWASNQALAIYIGLSFFPTAVHKFRNFY 226
           LYRE+ SVE+G +L+  +VE L EV    A+SGWASNQALAIYIGLSFFPTA HKFRNF 
Sbjct: 148 LYREMCSVERGPRLDSTEVEVLLEVCHWFAKSGWASNQALAIYIGLSFFPTAAHKFRNF- 206

Query: 227 LKKCPADVTKYLLALGPSDAAVKFLFPIFVEFCLENFPDEIKRFRGMVESADLTKPHTWF 286
           LKKCPADV KYL+ LGPSD AV+FLFPIFVEFCLENFPDEIKRFRGMVE+ADLTKPHTWF
Sbjct: 207 LKKCPADVAKYLVYLGPSDEAVRFLFPIFVEFCLENFPDEIKRFRGMVEAADLTKPHTWF 266

Query: 287 PFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAKGVYCS 346
           PFAR MKRKIIYHCGPTNSGKTYNALQRFMEAK GIYCSPLRLLAMEVFDKVNAKG+YCS
Sbjct: 267 PFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKTGIYCSPLRLLAMEVFDKVNAKGIYCS 326

Query: 347 LLTGQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQMMADPYRGYAWTRALLGLKADE 406
           LLTGQE+K VPFSNHVACTVEM STQELY+VA+IDEIQMMAD  RGYAWTRALLGL ADE
Sbjct: 327 LLTGQEKKRVPFSNHVACTVEMASTQELYEVAVIDEIQMMADSNRGYAWTRALLGLTADE 386

Query: 407 IHVCGDPSVLDIVRKICQDTGDQLYEQHYERFKPLVVEAKTLLGNLQNIRSGDCVVAFSR 466
           IH+CGDPSVLDIVRKICQD GD+L EQHYERFKPLVVEAKTLLGNL+NIRSGDCVVAFSR
Sbjct: 387 IHLCGDPSVLDIVRKICQDMGDELCEQHYERFKPLVVEAKTLLGNLENIRSGDCVVAFSR 446

Query: 467 REIFEVKLAIEKQTKHRCCVIYGALPPETRRQQANLFNDQNNEYDVLVASDAVGMGLNLN 526
           REIFEVKLAIEKQTKHRCCVIYGALPPETRRQQA+LFNDQ+NEYDVLVASDAVGMGLNLN
Sbjct: 447 REIFEVKLAIEKQTKHRCCVIYGALPPETRRQQASLFNDQSNEYDVLVASDAVGMGLNLN 506

Query: 527 IRRVIFNSLSKYNGDKMVHVPASQVKQIAGRAGRRGCLYPDGLATTLHIDDMDYLIECLK 586
           IRRVIFNSL+KYNGDKMV VPASQVKQIAGRAGRRGCLYPDGLATTLH+DD+DYLIECLK
Sbjct: 507 IRRVIFNSLTKYNGDKMVPVPASQVKQIAGRAGRRGCLYPDGLATTLHLDDLDYLIECLK 566

Query: 587 QPFDNVKKVGLFPFYEQLELFAGQLPNMTFSQLLEKFGENCRLDGSYYLCRHDHIKKIAN 646
           QPFD+VKKVGLFP YEQ+ELF+GQLP++TF+Q+LEKFGENCRLDGSY+LC+H+HIKKIAN
Sbjct: 567 QPFDDVKKVGLFPSYEQVELFSGQLPDLTFTQILEKFGENCRLDGSYFLCQHNHIKKIAN 626

Query: 647 MLEKIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSIAMGMPTCSARNDS 706
           MLEK+QGLSLEDRFNFCFAPVNVRDPKAMYHLLR+AT FGQKLPV++AMGMP  SARND+
Sbjct: 627 MLEKVQGLSLEDRFNFCFAPVNVRDPKAMYHLLRYATSFGQKLPVNVAMGMPRSSARNDA 686

Query: 707 ELLDLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIADLLAQSLIKANWKPESRNK 766
           ELLDLETRHQVLSMYLWLSNHFDEETFPYVKK E MAS IADLL QSL+KANWKPESR K
Sbjct: 687 ELLDLETRHQVLSMYLWLSNHFDEETFPYVKKVEAMASCIADLLGQSLVKANWKPESRIK 746

Query: 767 GKPNTGRSDVQTESRSKGVLKTGKSEEQTEPRSGAILKTEKKSNGYSIPQSLVK 820
           G+P                 KT KSE Q E RS   L+TEK   GYS  +SL+K
Sbjct: 747 GRP-----------------KTEKSEGQLETRSAVELQTEKTEMGYSRTRSLLK 783


>Glyma19g02570.1 
          Length = 829

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/831 (74%), Positives = 690/831 (83%), Gaps = 34/831 (4%)

Query: 1   MARGPASSLFHLCTRKRTLSRFKALLFNHSHPSPSQFH----PVRPFSTHLQNRRFLPSF 56
           MARG    LFHL TRKRTLS+ +ALLFN+ H   SQFH    PV P ST   N    P F
Sbjct: 1   MARG----LFHLYTRKRTLSKLQALLFNNHH---SQFHTFQNPVSPISTRFSNPLLRPRF 53

Query: 57  HQSLNLSGGRTNPTRPFSTDGEEGDGTVTPDSDFDADFGKNADFELGNEVNDGVCALSDN 116
            QS  LSG R  PTRPFS  G++G  T  P+ +F AD GK  DFELG EV + V    ++
Sbjct: 54  SQSSRLSGERFRPTRPFSAAGDDGGTTEAPEGEFVADSGKGIDFELGKEVVNSVHGFPEH 113

Query: 117 VDAANDGNDECSNEIVESVE-------FCNGSDSEEGGELVRESQEFVHVASRDPVELYR 169
              AND ++EC+ EI +SVE          G  S+   EL ++++EF+HVASR PVELYR
Sbjct: 114 GVVANDDSNECNLEIDDSVECSTSSSGGEGGGGSDNNNELGKKNEEFMHVASRGPVELYR 173

Query: 170 ELVSVEKGVKLNRYDVESLQEVFRCLAESGWASNQALAIYIGLSFFPTAVHKFRNFYLKK 229
           E+  VE G +L+R +VE L EV    A+SGWASNQALAIYIG+SFFPTA HKF  F  KK
Sbjct: 174 EMCRVEWGPRLDRTEVEVLLEVCHWFAKSGWASNQALAIYIGMSFFPTAAHKFHKFLKKK 233

Query: 230 CPADVTKYLLALGPSDAAVKFLFPIFVEFCLENFPDEIKRFRGMVESADLTKPHTWFPFA 289
           CP DV KYL+ LGPSD A++FLFPIFVEFCLENFPDEIKRFR MVESADLTKPHTWFPFA
Sbjct: 234 CPTDVAKYLVYLGPSDEAMRFLFPIFVEFCLENFPDEIKRFRSMVESADLTKPHTWFPFA 293

Query: 290 RAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAKGVYCSLLT 349
           RAMKRKIIYHCGPTNSGKTYNALQRFMEAK GIYCSPLRLLAMEVFDKVNAKG+YCSLLT
Sbjct: 294 RAMKRKIIYHCGPTNSGKTYNALQRFMEAKSGIYCSPLRLLAMEVFDKVNAKGIYCSLLT 353

Query: 350 GQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQMMADPYRGYAWTRALLGLKADEIHV 409
           GQE+K VPFSNHVACTVEM S QELY+VA+IDEIQMMAD  RGYAWTRALLGLKADEIH+
Sbjct: 354 GQEKKRVPFSNHVACTVEMASAQELYEVAVIDEIQMMADSNRGYAWTRALLGLKADEIHL 413

Query: 410 CGDPSVLDIVRKICQDTGDQLYEQHYERFKPLVVEAKTLLGNLQNIRSGDCVVAFSRREI 469
           CGDPSVLDIVRKICQDTGD+L EQHYERFKPLVVEAKTLLGN +NIRSGDCVVAFSRREI
Sbjct: 414 CGDPSVLDIVRKICQDTGDELCEQHYERFKPLVVEAKTLLGNFENIRSGDCVVAFSRREI 473

Query: 470 FEVKLAIEKQTKHRCCVIYGALPPETRRQQANLFNDQNNEYDVLVASDAVGMGLNLNIRR 529
           FEVKLAIEKQTKHRCCVIYGALPPETRRQQA+LFNDQ+NEYDVLVASDAVGMGLNLNIRR
Sbjct: 474 FEVKLAIEKQTKHRCCVIYGALPPETRRQQASLFNDQSNEYDVLVASDAVGMGLNLNIRR 533

Query: 530 VIFNSLSKYNGDKMVHVPASQVKQIAGRAGRRGCLYPDGLATTLHIDDMDYLIECLKQPF 589
           VIFNSL+KYNGDKMV +PASQVKQIAGRAGRRGCLYPDGLATT+H+DD+DYLIECLKQPF
Sbjct: 534 VIFNSLAKYNGDKMVPIPASQVKQIAGRAGRRGCLYPDGLATTMHLDDLDYLIECLKQPF 593

Query: 590 DNVKKVGLFPFYEQLELFAGQLPNMTFSQLLEKFGENCRLDGSYYLCRHDHIKKIANMLE 649
           D+VKKVGLFPFYEQ+ELF+GQLP++TF Q+LEKFGENCRLDGSY+LC+H+HIKKIANML 
Sbjct: 594 DDVKKVGLFPFYEQVELFSGQLPDLTFPQILEKFGENCRLDGSYFLCQHNHIKKIANMLG 653

Query: 650 KIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSIAMGMPTCSARNDSELL 709
           K+QGLSL+D FNFCFAPVNVRDPKAMYHLLR+AT FGQKLPV++AMGMP  SARND+ELL
Sbjct: 654 KVQGLSLKDHFNFCFAPVNVRDPKAMYHLLRYATSFGQKLPVNVAMGMPRSSARNDAELL 713

Query: 710 DLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIADLLAQSLIKANWKPESRNKGKP 769
           DLETRHQVLSMYLWLSNHFDEETFPYVKK E MAS IADLL QSL++ANWKPESR KG+P
Sbjct: 714 DLETRHQVLSMYLWLSNHFDEETFPYVKKVEAMASCIADLLGQSLVRANWKPESRIKGRP 773

Query: 770 NTGRSDVQTESRSKGVLKTGKSEEQTEPRSGAILKTEKKSNGYSIPQSLVK 820
            T +S+                  Q E RS   L+TEK+  GYS  +SL+K
Sbjct: 774 KTEKSE----------------GGQLETRSEVELQTEKREMGYSRLRSLLK 808


>Glyma11g00970.1 
          Length = 598

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/528 (39%), Positives = 325/528 (61%), Gaps = 48/528 (9%)

Query: 278 DLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDK 337
           DLT PHTW+P AR   R+II H GPTNSGKT++AL++   +  G+YC PLRLLA E+  +
Sbjct: 58  DLTCPHTWYPQARKKHRRIILHVGPTNSGKTHHALKQLESSASGVYCGPLRLLAWEIAKR 117

Query: 338 VNAKGVYCSLLTGQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQ------------- 384
           +N   V C L+TGQER  V  +NH A TVEMV     Y  A+IDEIQ             
Sbjct: 118 LNKAQVPCDLITGQERDEVDGANHKAVTVEMVDVSADYQCAVIDEIQAIVLLINFFISET 177

Query: 385 -------------MMADPY-------RGYAWTRALLGLKADEIHVCGDPSVLDIVRKICQ 424
                        ++  PY       RGY++TRALLG+ ADE+H+CGDP+ + ++++I +
Sbjct: 178 STFEEALMALWALLVVIPYLMIGCITRGYSFTRALLGIAADELHLCGDPAAVPLIQEIMK 237

Query: 425 DTGDQLYEQHYERFKPLVVEAKTLLGNLQNIRSGDCVVAFSRREIFEVKLAIEKQTKHRC 484
            TGD++  Q YER  PLV   K  LG+  N+R+GDC+V FSR+EI+++K  IEK+ KH C
Sbjct: 238 ITGDEIEVQFYERLSPLV-PLKVPLGSFSNVRNGDCIVTFSRQEIYKLKKRIEKEGKHLC 296

Query: 485 CVIYGALPPETRRQQANLFNDQNNEYDVLVASDAVGMGLNLNIRRVIFNSLSKYNGDKMV 544
            V+YG+LPPETR +QA++FND ++E+DVLVASDA+GMGLNLNI R+IF+++ K++G ++ 
Sbjct: 297 SVVYGSLPPETRTRQASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVR 356

Query: 545 HVPASQVKQIAGRAGRRGCLYPDGLATTLHIDDMDYLIECLKQPFDNVKKVGLFPFYEQL 604
            +   ++KQIAGRAGR G  +P G  T +  +D+  L   L  P   +++ G+ P ++ +
Sbjct: 357 DLTVPEIKQIAGRAGRYGSNFPVGEVTCMDEEDLPLLHSSLNSPSPILERAGILPTFDLM 416

Query: 605 ELFAGQLPNMTFSQLLEKFGENCRLDGSYYLCRHDHIKKIANMLEKIQGLSLEDRFNFCF 664
            +++   P   F Q+L  F +N +L  +Y++   + + K+A +++++  L L +++ FC 
Sbjct: 417 YMYSRLHPRNGFYQILAHFLDNAKLSENYFIVNCEQLLKVAAVIDELP-LGLHEKYLFCI 475

Query: 665 APVNVRDPKAMYHLLRFATKFGQKLPVSI-------AMGMPTCSARNDSELLDLETRHQV 717
           +P ++ D  +   L +FA  + +K  V +       ++ +P    +  + L +LE+ H+V
Sbjct: 476 SPADMDDEISSQGLAQFAENYAKKGLVRLREIFTPGSLKVP----KTPAALKELESIHKV 531

Query: 718 LSMYLWLSNHFDEETFPYVKKAETMASDIADLLAQSLIKANW-KPESR 764
           L +Y+WLS    EE+FP  + A +  +  + L+ + L +  W KP +R
Sbjct: 532 LDLYVWLSFRL-EESFPDHELAASQKAICSMLIEEFLERLGWQKPMAR 578


>Glyma01g44610.1 
          Length = 418

 Score =  290 bits (743), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 154/398 (38%), Positives = 257/398 (64%), Gaps = 15/398 (3%)

Query: 375 YDVAIIDEIQMMADPYRGYAWTRALLGLKADEIHVCGDPSVLDIVRKICQDTGDQLYEQH 434
           Y  A+IDEIQM+    RGY++TRALLG+ ADE+H+CGDP+ + ++++I + TGD++  Q 
Sbjct: 8   YQCAVIDEIQMIGCTTRGYSFTRALLGIAADELHLCGDPAAVPLIQEILKITGDEIEVQF 67

Query: 435 YERFKPLVVEAKTLLGNLQNIRSGDCVVAFSRREIFEVKLAIEKQTKHRCCVIYGALPPE 494
           YER  PLV      LG+  N+R+GDC+V FSR+EI+++K  IEK+ KH C V+YG+LPPE
Sbjct: 68  YERLSPLV-PLNVPLGSFSNVRNGDCIVTFSRQEIYKLKKRIEKEGKHLCSVVYGSLPPE 126

Query: 495 TRRQQANLFNDQNNEYDVLVASDAVGMGLNLNIRRVIFNSLSKYNGDKMVHVPASQVKQI 554
           TR +QA++FND ++E+DVLVASDA+GMGLNLNI R+IF+++ K++G ++  +   ++KQI
Sbjct: 127 TRTRQASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLSVPEIKQI 186

Query: 555 AGRAGRRGCLYPDGLATTLHIDDMDYLIECLKQPFDNVKKVGLFPFYEQLELFAGQLPNM 614
           AGRAGR G  +P G  T +  +D+  L   L  P   +++ GL P ++ + +++   P  
Sbjct: 187 AGRAGRYGSNFPVGEVTCMDEEDLLLLHSSLNSPSPILERAGLLPTFDLMYMYSRLHPRN 246

Query: 615 TFSQLLEKFGENCRLDGSYYLCRHDHIKKIANMLEKIQGLSLEDRFNFCFAPVNVRDPKA 674
            F Q+L  F ++ +L  +Y++   + + K+A +++++  L L +++ FC +P ++ D  +
Sbjct: 247 GFYQILAHFLDHAKLSENYFIVNCEQLLKVAAVIDELP-LGLHEKYLFCISPADMDDEIS 305

Query: 675 MYHLLRFATKFGQKLPVSI-------AMGMPTCSARNDSELLDLETRHQVLSMYLWLSNH 727
              L +FA  + +K  V +       ++ +P    +  + L +LE+ H+VL +Y+WLS  
Sbjct: 306 SQGLTQFAENYAKKGLVRLREIFTPGSLKVP----KTPAALKELESIHKVLDLYVWLSFR 361

Query: 728 FDEETFPYVKKAETMASDIADLLAQSLIKANW-KPESR 764
             EE+FP  + A +  +  + L+ + L +  W KP +R
Sbjct: 362 L-EESFPDHELAVSQKAICSMLIEEFLERLGWQKPMAR 398