Miyakogusa Predicted Gene

Lj2g3v1035930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1035930.1 Non Chatacterized Hit- tr|J3LKG8|J3LKG8_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB03G1,67.11,2e-19,no
description,Helix-loop-helix domain; coiled-coil,NULL; HLH,
helix-loop-helix DNA-binding domain,H,CUFF.36064.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g02510.1                                                       131   2e-31
Glyma13g05280.1                                                       131   2e-31
Glyma18g49320.1                                                       122   1e-28
Glyma09g37370.1                                                       121   2e-28
Glyma08g41000.1                                                       111   2e-25
Glyma04g34080.1                                                       108   8e-25
Glyma02g02250.1                                                       107   2e-24
Glyma18g15920.1                                                       107   3e-24
Glyma01g05310.1                                                       106   7e-24
Glyma06g20400.1                                                       103   4e-23
Glyma04g33920.1                                                        48   3e-06
Glyma06g20520.1                                                        47   4e-06

>Glyma19g02510.1 
          Length = 91

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/70 (94%), Positives = 68/70 (97%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +LVSKLRQLVPEIRDRRSDKVSASKVL ETCNYIRSLHREVDDLSERLSQLLA+ID DSP
Sbjct: 22 DLVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSP 81

Query: 82 EAAIIRSLIN 91
          EAAIIRSLIN
Sbjct: 82 EAAIIRSLIN 91


>Glyma13g05280.1 
          Length = 91

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/70 (94%), Positives = 68/70 (97%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +LVSKLRQLVPEIRDRRSDKVSASKVL ETCNYIRSLHREVDDLSERLSQLLA+ID DSP
Sbjct: 22 DLVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSP 81

Query: 82 EAAIIRSLIN 91
          EAAIIRSLIN
Sbjct: 82 EAAIIRSLIN 91


>Glyma18g49320.1 
          Length = 92

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/71 (85%), Positives = 64/71 (90%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          ELVSKLRQLVPEIR+RRSDKVSASKVL ETCNYIR LHREV DLSERLSQLL +ID DS 
Sbjct: 22 ELVSKLRQLVPEIRNRRSDKVSASKVLQETCNYIRGLHREVSDLSERLSQLLTTIDADSA 81

Query: 82 EAAIIRSLINQ 92
          EA IIRSL+NQ
Sbjct: 82 EAGIIRSLLNQ 92


>Glyma09g37370.1 
          Length = 91

 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/70 (87%), Positives = 64/70 (91%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          ELVSKLRQLVPEIR+RRSDKVSASKVL ETCNYIRSLHREV DLSERLSQLL +ID DS 
Sbjct: 22 ELVSKLRQLVPEIRNRRSDKVSASKVLQETCNYIRSLHREVSDLSERLSQLLTTIDADSA 81

Query: 82 EAAIIRSLIN 91
          EA IIRSL+N
Sbjct: 82 EAGIIRSLLN 91


>Glyma08g41000.1 
          Length = 93

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 64/69 (92%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +L+SKL+QL+PE+R RRSDKVSASKVL ETCNYI+SLHREVDDLS+RLSQLLA+ D +S 
Sbjct: 24 DLISKLQQLIPELRARRSDKVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSA 83

Query: 82 EAAIIRSLI 90
          +AAIIRSL+
Sbjct: 84 QAAIIRSLL 92


>Glyma04g34080.1 
          Length = 92

 Score =  108 bits (271), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 65/71 (91%), Gaps = 2/71 (2%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +LVSKL+QL+PEIRDRRSDKVSASKVL ETCNYIRSLHREVDDLSERLS+LLA+   D+ 
Sbjct: 24 DLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSELLAT--TDTA 81

Query: 82 EAAIIRSLINQ 92
          +AAIIR+L+ Q
Sbjct: 82 QAAIIRNLLMQ 92


>Glyma02g02250.1 
          Length = 93

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 64/69 (92%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +LVSKL+QL+PE+R RRSDKVSA+KVL ETCNYI++LHREVDDLS+RLS+LLA+ D +S 
Sbjct: 24 DLVSKLQQLIPELRARRSDKVSAAKVLQETCNYIKNLHREVDDLSDRLSELLANTDSNSA 83

Query: 82 EAAIIRSLI 90
          +AAIIRSL+
Sbjct: 84 QAAIIRSLL 92


>Glyma18g15920.1 
          Length = 93

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 63/69 (91%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +++SKL+QL+PE+  RRSDKVSASKVL ETCNYI+SLHREVDDLS+RLSQLLA+ D +S 
Sbjct: 24 DIISKLQQLIPELDARRSDKVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSA 83

Query: 82 EAAIIRSLI 90
          +AAIIRSL+
Sbjct: 84 QAAIIRSLL 92


>Glyma01g05310.1 
          Length = 93

 Score =  106 bits (264), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 64/69 (92%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +LVSKL+QL+PE+R RRSDKVS++KVL ETCNYI++LHREVDDLS+RLS+LLA+ D +S 
Sbjct: 24 DLVSKLQQLIPELRARRSDKVSSAKVLQETCNYIKNLHREVDDLSDRLSELLANTDSNSA 83

Query: 82 EAAIIRSLI 90
          +AAIIRSL+
Sbjct: 84 QAAIIRSLL 92


>Glyma06g20400.1 
          Length = 92

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 63/71 (88%), Gaps = 2/71 (2%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASIDGDSP 81
          +LVSKL+QL+PEIRDRRSDKVSASKVL ETCNYIRSLHREV DLSERLS+LL +   D+ 
Sbjct: 24 DLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRSLHREVGDLSERLSELLDT--TDTA 81

Query: 82 EAAIIRSLINQ 92
          +AAIIR+L+ Q
Sbjct: 82 QAAIIRNLLMQ 92


>Glyma04g33920.1 
          Length = 92

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 3/59 (5%)

Query: 22 ELVSKLRQLVPEIR---DRRSDKVSASKVLHETCNYIRSLHREVDDLSERLSQLLASID 77
          +L+ +L+ L+P++    + R+  VS  K++ ETC++I  L +EV DL ERL QL+ S+D
Sbjct: 19 DLMLRLQALLPQLNQTSNSRASSVSVMKIMKETCSHITRLQKEVKDLGERLVQLMDSVD 77


>Glyma06g20520.1 
          Length = 91

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 3/71 (4%)

Query: 22 ELVSKLRQLVPEIRDRRSDKVSAS--KVLHETCNYIRSLHREVDDLSERLSQLLASID-G 78
          +L+ +L+ L+P++   R+ + S S  K++ ETC++I  L  EV DL ERL++L+ S+D  
Sbjct: 19 DLMLRLQALLPQLNQTRNSRASESLMKIMKETCSHINRLQNEVKDLGERLAELIDSVDLS 78

Query: 79 DSPEAAIIRSL 89
          D  E  + R L
Sbjct: 79 DIDEECLTRLL 89