Miyakogusa Predicted Gene

Lj2g3v1034430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034430.1 Non Chatacterized Hit- tr|D7SR99|D7SR99_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.7,0.000000000000003,seg,NULL,CUFF.36053.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08580.1                                                        68   3e-12
Glyma19g01060.1                                                        66   9e-12

>Glyma05g08580.1 
          Length = 426

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/104 (47%), Positives = 55/104 (52%), Gaps = 25/104 (24%)

Query: 40  STPKTCFNSILILCTSIALSFTNADSAYAFVVTPPRKLQSDELAT----------VVYIT 89
           + PK+       L  S  L  ++ADSA AFVVT PRKLQSDELAT          VVYIT
Sbjct: 64  TIPKSLLLLCTSLALSFTLLLSDADSAAAFVVTSPRKLQSDELATVRLFQENTPSVVYIT 123

Query: 90  NLAVKMRLRWM-------------CWRFLKEGNIVTNYHVIPGA 120
           NLAVK     +              W   KEG+IVTNYHVI GA
Sbjct: 124 NLAVKQDAFTLDVLEVPQGSGSGFVWD--KEGHIVTNYHVIRGA 165


>Glyma19g01060.1 
          Length = 431

 Score = 66.2 bits (160), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 45/86 (52%), Positives = 48/86 (55%), Gaps = 25/86 (29%)

Query: 58  LSFTNADSAYAFVVTPPRKLQSDELAT----------VVYITNLAVKMRLRWM------- 100
           L  + ADSA AFVVT PRKLQSDELAT          VVYITNLAVK     +       
Sbjct: 87  LLLSPADSAAAFVVTSPRKLQSDELATVRLFQENTPSVVYITNLAVKQDAFTLDVLEVPQ 146

Query: 101 ------CWRFLKEGNIVTNYHVIPGA 120
                  W   KEG+IVTNYHVI GA
Sbjct: 147 GSGSGFVWD--KEGHIVTNYHVIRGA 170