Miyakogusa Predicted Gene

Lj2g3v1034410.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034410.2 Non Chatacterized Hit- tr|I1N5X8|I1N5X8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,80.54,0,CRS1_YhbY,RNA-binding, CRM domain; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.36052.2
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g01700.1                                                       249   1e-66
Glyma19g01710.1                                                       233   6e-62
Glyma17g06210.1                                                       139   2e-33
Glyma17g06210.2                                                       138   2e-33
Glyma20g34730.1                                                       132   2e-31
Glyma10g32920.1                                                       131   3e-31
Glyma08g04630.1                                                       131   3e-31
Glyma07g10270.1                                                       130   6e-31
Glyma09g31620.1                                                       128   2e-30
Glyma02g09730.1                                                       118   3e-27
Glyma15g43130.1                                                        71   4e-13
Glyma19g02630.1                                                        62   2e-10

>Glyma19g01700.1 
          Length = 993

 Score =  249 bits (635), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 115/137 (83%), Positives = 125/137 (91%)

Query: 14  HSSETNSEIYAGHSSYSKTSKPALIQGVGTPNKVRFQLPGEAELAEDADSLLVGLGPRFT 73
           HSSE NS  YAG SS  KT+KPALIQGVG+PNKVRFQLPGEAELA+DADSLL G+GPRF 
Sbjct: 253 HSSEKNSVTYAGKSSNVKTAKPALIQGVGSPNKVRFQLPGEAELAKDADSLLTGIGPRFI 312

Query: 74  DWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTDDEMTTLRRLSRPIPSHFALGR 133
           DWWGY+PLPVDADLLPAV+PGYRKPFRLLPYGVKPKLTDDEMTT+RRL + +P HFALGR
Sbjct: 313 DWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGKHLPCHFALGR 372

Query: 134 NRKLQGLAAAIIKLWER 150
           N+KL GLAAAIIKLWER
Sbjct: 373 NKKLHGLAAAIIKLWER 389


>Glyma19g01710.1 
          Length = 824

 Score =  233 bits (594), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 110/137 (80%), Positives = 119/137 (86%)

Query: 14  HSSETNSEIYAGHSSYSKTSKPALIQGVGTPNKVRFQLPGEAELAEDADSLLVGLGPRFT 73
           H SE NS   A  +S ++T+KPALI GVGTPNKVRFQLP EAELAED D LL GLGPRFT
Sbjct: 69  HLSEKNSVACAVENSNAETAKPALILGVGTPNKVRFQLPDEAELAEDTDCLLTGLGPRFT 128

Query: 74  DWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTDDEMTTLRRLSRPIPSHFALGR 133
           DWWG +PLPVDADLLPAV+ GYRKPFRLLPYGV PKLTDDEMTTL+RL +P+P HFALGR
Sbjct: 129 DWWGGDPLPVDADLLPAVIHGYRKPFRLLPYGVNPKLTDDEMTTLKRLGKPLPCHFALGR 188

Query: 134 NRKLQGLAAAIIKLWER 150
           NRKLQGLAAAIIKLWER
Sbjct: 189 NRKLQGLAAAIIKLWER 205


>Glyma17g06210.1 
          Length = 747

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 76/99 (76%), Gaps = 2/99 (2%)

Query: 53  GEAELAE--DADSLLVGLGPRFTDWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKL 110
            E EL E  D + LL  LGPRF DW G +PLPVDADLLPAVVPGY+ PFRLLPY ++P L
Sbjct: 298 SEEELMEMCDLNHLLDELGPRFKDWTGRQPLPVDADLLPAVVPGYKTPFRLLPYRIRPCL 357

Query: 111 TDDEMTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWE 149
           T+ EMT  RRL+R    HFALGRNR+LQGLA A++KLWE
Sbjct: 358 TNKEMTNFRRLARTTAPHFALGRNRELQGLARAMVKLWE 396


>Glyma17g06210.2 
          Length = 692

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 76/99 (76%), Gaps = 2/99 (2%)

Query: 53  GEAELAE--DADSLLVGLGPRFTDWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKL 110
            E EL E  D + LL  LGPRF DW G +PLPVDADLLPAVVPGY+ PFRLLPY ++P L
Sbjct: 298 SEEELMEMCDLNHLLDELGPRFKDWTGRQPLPVDADLLPAVVPGYKTPFRLLPYRIRPCL 357

Query: 111 TDDEMTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWE 149
           T+ EMT  RRL+R    HFALGRNR+LQGLA A++KLWE
Sbjct: 358 TNKEMTNFRRLARTTAPHFALGRNRELQGLARAMVKLWE 396


>Glyma20g34730.1 
          Length = 692

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/123 (55%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 27  SSYSKTSKPALIQGVGTPNKVRFQLPGEAELAEDADSLLVGLGPRFTDWWGYEPLPVDAD 86
           +S S TS P          K R  LP +     + D LL GLGPR+TDW G +PLPVDAD
Sbjct: 278 ASNSGTSAPLAKLESTNDEKERDYLP-KVNYEHEVDKLLDGLGPRYTDWPGCDPLPVDAD 336

Query: 87  LLPAVVPGYRKPFRLLPYGVKPKLTDDEMTTLRRLSRPIPSHFALGRNRKLQGLAAAIIK 146
           +LP  VPGY+ PFR+LP+GV+  L   E T LRR++R +P HFALGRNR+LQGLA A+IK
Sbjct: 337 MLPVTVPGYQPPFRVLPFGVRATLGLREATALRRIARTLPPHFALGRNRQLQGLAVAMIK 396

Query: 147 LWE 149
           LWE
Sbjct: 397 LWE 399


>Glyma10g32920.1 
          Length = 577

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 84/123 (68%), Gaps = 1/123 (0%)

Query: 27  SSYSKTSKPALIQGVGTPNKVRFQLPGEAELAEDADSLLVGLGPRFTDWWGYEPLPVDAD 86
           +S S TS P         NK +  LP +     + D LL GLGPR+TDW G  PLPVDAD
Sbjct: 328 ASTSGTSAPLANLESTNDNKEKDYLP-KVNYEHEVDKLLDGLGPRYTDWPGCNPLPVDAD 386

Query: 87  LLPAVVPGYRKPFRLLPYGVKPKLTDDEMTTLRRLSRPIPSHFALGRNRKLQGLAAAIIK 146
           +LPA VPGY+ PFR+LP+GV+  L   E T+LRR++R +P HFALGRNR++QGLA A+ K
Sbjct: 387 MLPATVPGYQPPFRVLPFGVRATLGLREATSLRRIARTLPPHFALGRNRQVQGLAVAMTK 446

Query: 147 LWE 149
           LWE
Sbjct: 447 LWE 449


>Glyma08g04630.1 
          Length = 574

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 77/99 (77%), Gaps = 4/99 (4%)

Query: 52  PGEAELAEDADSLLVGLGPRFTDWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLT 111
           P EAE     + +L G GPRF +WWG   LPVDAD LP +VPGY+ P RLLP G++P+LT
Sbjct: 130 PEEAEF----NRMLDGFGPRFVEWWGTGILPVDADSLPPMVPGYKTPLRLLPAGMRPQLT 185

Query: 112 DDEMTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWER 150
           +DE+T +R+L++ +P HFALGRNR LQGLA+AI++LWE+
Sbjct: 186 NDELTNMRKLAKSLPCHFALGRNRNLQGLASAILRLWEK 224


>Glyma07g10270.1 
          Length = 781

 Score =  130 bits (326), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 74/96 (77%)

Query: 55  AELAEDADSLLVGLGPRFTDWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTDDE 114
           +E   + ++LL GLGPRF  WWG   LPVDADLLP  VPGY+ PFRLLP G++ +LT+ E
Sbjct: 323 SEAEAEYNALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAE 382

Query: 115 MTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWER 150
           MT LR+L++ +P HFALGRNR  QGLA AI+KLWE+
Sbjct: 383 MTNLRKLAKSLPCHFALGRNRNHQGLACAILKLWEK 418


>Glyma09g31620.1 
          Length = 740

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 74/96 (77%)

Query: 55  AELAEDADSLLVGLGPRFTDWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTDDE 114
           +E   + ++LL GLGPRF  WWG   LPVDADLLP  VPGY+ PFRLLP G++ +LT+ E
Sbjct: 297 SEAEAEYNALLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAE 356

Query: 115 MTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWER 150
           MT LR+L++ +P HFA+GRNR  QGLA AI+KLWE+
Sbjct: 357 MTNLRKLAKSLPCHFAVGRNRNHQGLACAILKLWEK 392


>Glyma02g09730.1 
          Length = 753

 Score =  118 bits (295), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/91 (57%), Positives = 68/91 (74%)

Query: 60  DADSLLVGLGPRFTDWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTDDEMTTLR 119
           + + LL GL PRF DWW ++PLPVDADLLP  VP ++ PFRL P     K T  E+T  R
Sbjct: 258 ETNRLLDGLRPRFIDWWMHKPLPVDADLLPVEVPRFQPPFRLCPPHSSAKQTAYELTYFR 317

Query: 120 RLSRPIPSHFALGRNRKLQGLAAAIIKLWER 150
           +L++P+P+HF LGRN+ L+GLAAAI+KLWE+
Sbjct: 318 KLAQPLPTHFVLGRNKGLKGLAAAILKLWEK 348


>Glyma15g43130.1 
          Length = 73

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 10/71 (14%)

Query: 79  EPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTDDEMTTLRRLSRPIPSHFALGRNRKLQ 138
           +PLPVDA LLP      R+P           LT+ EMT  RRL+R    HFALGRNR+LQ
Sbjct: 2   QPLPVDAYLLPDTSSLSRRPC----------LTNKEMTNFRRLARTTAPHFALGRNRELQ 51

Query: 139 GLAAAIIKLWE 149
           GLA A++KLWE
Sbjct: 52  GLARAMVKLWE 62


>Glyma19g02630.1 
          Length = 68

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 20/83 (24%)

Query: 70  PRFTDWWGYEPLPVDADLLPAVVPGYRKPFRLLPYGVKPKLTDDEMTTLRRLSRPIPSHF 129
           PRF DW  ++PLPVDADLLP VVPGY  P       + P L   +M    R       ++
Sbjct: 1   PRFKDWTSHQPLPVDADLLPVVVPGYETP-------LCPCL---QMFLSNR-------YY 43

Query: 130 AL---GRNRKLQGLAAAIIKLWE 149
            L   GRNR+LQGLA A++K WE
Sbjct: 44  LLANAGRNRELQGLARAMVKRWE 66