Miyakogusa Predicted Gene

Lj2g3v1022790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022790.1 Non Chatacterized Hit- tr|D8QYY2|D8QYY2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,62.5,2e-18,MAT1,Cdk-activating kinase assembly factor MAT1,
centre; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY ,CUFF.36006.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g04910.1                                                       108   1e-24
Glyma07g34810.1                                                        66   1e-11

>Glyma19g04910.1 
          Length = 188

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 54/55 (98%)

Query: 8  FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIMVN 62
          FNKREDDFPSLREYNDYLE+VEDMTFNLIEG+DV+ IEAKIAKYQEEN+EQIM+N
Sbjct: 23 FNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVSDIEAKIAKYQEENAEQIMIN 77


>Glyma07g34810.1 
          Length = 168

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 34/41 (82%)

Query: 8   FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKI 48
           FNK +DD PSLREYNDY E+VE MT +L EG++ AAIEAKI
Sbjct: 121 FNKHQDDLPSLREYNDYKEEVEVMTLDLTEGINAAAIEAKI 161