Miyakogusa Predicted Gene
- Lj2g3v1022340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1022340.1 tr|G7JNT4|G7JNT4_MEDTR Aldehyde dehydrogenase
OS=Medicago truncatula GN=MTR_4g106620 PE=4 SV=1,68.25,2e-18,SUBFAMILY
NOT NAMED,NULL; CCR4-NOT TRANSCRIPTION COMPLEX RELATED,NULL;
ZF_RING_2,Zinc finger, RING-t,CUFF.35969.1
(322 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g01690.1 154 1e-37
Glyma17g10190.1 120 2e-27
Glyma13g40460.1 58 1e-08
Glyma15g04950.1 58 1e-08
Glyma13g19940.1 58 1e-08
Glyma10g05590.1 58 2e-08
Glyma11g15670.1 56 5e-08
>Glyma05g01690.1
Length = 332
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 159/327 (48%), Gaps = 45/327 (13%)
Query: 13 KKKRTNGSAKLKQIKLDVRREQWLSR--VK-KGC--NVDSNGRMDNCPSS---KHTASEE 64
KKKRTN SAKLKQ K+D RREQWLS+ VK KGC VD +G PS KH+
Sbjct: 22 KKKRTNRSAKLKQYKIDARREQWLSQGAVKSKGCKDGVDDDGHAPP-PSPAVVKHSLEPL 80
Query: 65 NRSSCKEMTRKGEDIEGTCIQDSDSRSTINSP-------DRST------YSHXXXXXXXX 111
N R+GE+ +G DSDS S N P D T
Sbjct: 81 N------TRRRGEEDDGLIHHDSDSESPSNCPAGVLCGTDSGTNFTGSSSGGSSSSSSSS 134
Query: 112 XXXXXXXXXXXXXXXXXXXXXXXGCLDDWEAVADALYANDKSHSVVSESPAEHEAECRYT 171
GCLDDWEA+ADAL A+DK + +SP
Sbjct: 135 GGCCSGNVTEEEEEEEGDDDDDDGCLDDWEAMADALAADDKRENPCPDSPP-------VV 187
Query: 172 VLEDDKNPRVDFSKADFKSEVPESKPNRRAWKPDDTLRPRCLPNLSKQRNSPLNSNWRGS 231
+ N SK + VP N RAW+ DD RP+ LPNLSKQ + P N + RG
Sbjct: 188 SPSEGSNLGSPNSKPESDGLVPWGSGNSRAWRADDAFRPQSLPNLSKQHSMP-NPDRRG- 245
Query: 232 RKTVPWAWQTIISQPSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCR 291
VPW PS CPIC EDLD+TD+SF+PC CGF LCLFCHK+ILE D RCP CR
Sbjct: 246 ---VPWGRAPT---PSSCPICCEDLDLTDTSFMPCLCGFRLCLFCHKRILEEDGRCPGCR 299
Query: 292 KLY--DHVDGNVGLNIGAKAFCITQSC 316
K Y + V+ + G+ + +SC
Sbjct: 300 KPYECEPVETEASVLGGSLTLRLARSC 326
>Glyma17g10190.1
Length = 337
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 72/112 (64%), Gaps = 8/112 (7%)
Query: 184 SKADFKSEVPESKPNRRAWKPDDTLRPRCLPNLSKQRNSPLNSNWRGSRKTVPWAWQTII 243
SK + P N RAW+ DD RP+ LPNLSKQ + P N + RG VPW
Sbjct: 205 SKPESGRLFPWGSGNSRAWRADDAFRPQSLPNLSKQHSMP-NPDRRG----VPWGRAPT- 258
Query: 244 SQPSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCRKLYD 295
PS CPIC EDLD+TD+SF+PC CGF LCLFCHK+ILE D RCP CRK Y+
Sbjct: 259 --PSSCPICCEDLDLTDTSFMPCLCGFRLCLFCHKRILEEDGRCPGCRKPYE 308
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 13 KKKRTNGSAKLKQIKLDVRREQWLSRVKKGCNVDSNGRMDNCPSSKHT--ASEENRSSCK 70
KKKRTN SAKLKQ K+D RREQWLS+ V S G D H + E + S +
Sbjct: 22 KKKRTNRSAKLKQYKIDARREQWLSQGA----VKSKGYKDGLDDDGHAPPSPAEVKHSVE 77
Query: 71 EMT--RKGEDIEGTCIQDSDSRSTINSP 96
+ R+GE+ +G DSDS S N P
Sbjct: 78 PLNTRRRGEEDDGLIHHDSDSESPTNCP 105
>Glyma13g40460.1
Length = 1003
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILE------ADARCPSCRKLYD 295
CP+C E++D+TD PC CG+ +C++C ILE + RCP+CR YD
Sbjct: 9 CPLCAEEMDLTDQQLKPCKCGYQICVWCWHHILEMAEKDDTEGRCPACRSPYD 61
>Glyma15g04950.1
Length = 1029
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILE------ADARCPSCRKLYD 295
CP+C E++D+TD PC CG+ +C++C ILE + RCP+CR YD
Sbjct: 20 CPLCAEEMDLTDQQLKPCKCGYEICVWCWHHILEMAEKDDTEGRCPACRSPYD 72
>Glyma13g19940.1
Length = 358
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL------EADARCPSCRKLYD 295
CPIC E++D+TD PC CG+ +C++C I+ E ++RCP+CR YD
Sbjct: 9 CPICTEEMDLTDQQLKPCKCGYEICVWCWHHIMEMAQKDETESRCPACRSPYD 61
>Glyma10g05590.1
Length = 938
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL------EADARCPSCRKLYD 295
CPIC E++D+TD PC CG+ +C++C I+ E + RCP+CR YD
Sbjct: 9 CPICTEEMDLTDQQLKPCKCGYEICVWCWHHIMEMAQKDETEGRCPACRSPYD 61
>Glyma11g15670.1
Length = 941
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL------EADARCPSCRKLYD 295
CP+C E++D+TD PC CG+ +C++C I+ + + RCP+CR YD
Sbjct: 9 CPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPYD 61