Miyakogusa Predicted Gene

Lj2g3v1019760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1019760.1 Non Chatacterized Hit- tr|G6BEC7|G6BEC7_CLODI
Putative uncharacterized protein OS=Clostridium
diffic,32.58,0.000000000000002,no description,NULL; seg,NULL;
LigT-like,RNA ligase/cyclic nucleotide phosphodiesterase;
2_5_RNA_lig,CUFF.35931.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g04420.1                                                       264   4e-71
Glyma19g01500.2                                                       255   2e-68
Glyma19g01500.1                                                       255   2e-68
Glyma19g01490.1                                                       255   2e-68
Glyma06g37280.1                                                        93   1e-19

>Glyma13g04420.1 
          Length = 182

 Score =  264 bits (674), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 125/177 (70%), Positives = 145/177 (81%), Gaps = 2/177 (1%)

Query: 2   GYAIELYMDPALENQVLKAWNVIARRQISTQLIEMESRPHITLFSTPFLEPSKLEPLLKT 61
           G+AIELY++PALENQVLKAWNV+ARRQIST+LIEMESRPHITLFS PFLEPSKL+ LLK 
Sbjct: 5   GFAIELYLEPALENQVLKAWNVLARRQISTELIEMESRPHITLFSAPFLEPSKLDSLLKV 64

Query: 62  LSTKHDPFPLSFSSVGAFPGDHNXXXXXXXXXXXXXHFQSQLCDAIRKEGVDVPDEYALG 121
            ++KHDP PL+FSS+  FP   N             HFQSQLCDAIRKEG+++  E+A  
Sbjct: 65  FASKHDPLPLTFSSLATFPN--NLLFLAPTPSLSLLHFQSQLCDAIRKEGIEIAHEFAFN 122

Query: 122 SWIPFCSVAHQVPKARMAEAFSLLRDLKLPVSGYAVDVAVVQFSPVRELFSFVLGTT 178
           SWIP+CSVAH VP+ RM EAFSLLR+LKLPVSGYA+DVA+VQFSPVRE+FSFVLG  
Sbjct: 123 SWIPYCSVAHHVPQNRMPEAFSLLRELKLPVSGYAMDVALVQFSPVREIFSFVLGNN 179


>Glyma19g01500.2 
          Length = 184

 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 128/180 (71%), Positives = 147/180 (81%), Gaps = 1/180 (0%)

Query: 1   MGYAIELYMDPALENQVLKAWNVIARRQISTQLIEMESRPHITLFSTPFLEPSKLEPLLK 60
           +G+AIELY+DPALENQVLKAWNV+ARRQIST LIEMESRPHITLFS PFLEPSKLE LLK
Sbjct: 5   LGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLK 64

Query: 61  TLSTKHDPFPLSFSSVGAFPGD-HNXXXXXXXXXXXXXHFQSQLCDAIRKEGVDVPDEYA 119
             ++KHDP PL+FSS+  FP D  N             H QSQLCDAIRKEG+++ D+YA
Sbjct: 65  GFASKHDPLPLTFSSLATFPNDPDNLLFLAPTPSLSLLHLQSQLCDAIRKEGLEIGDDYA 124

Query: 120 LGSWIPFCSVAHQVPKARMAEAFSLLRDLKLPVSGYAVDVAVVQFSPVRELFSFVLGTTA 179
             SWIP+CSVAH VPK RM EAFSLLR+LKLPVSGYA+D+A+VQFSPVRE+FSFVLG  +
Sbjct: 125 FNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSPVREIFSFVLGNNS 184


>Glyma19g01500.1 
          Length = 186

 Score =  255 bits (651), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 128/179 (71%), Positives = 146/179 (81%), Gaps = 1/179 (0%)

Query: 1   MGYAIELYMDPALENQVLKAWNVIARRQISTQLIEMESRPHITLFSTPFLEPSKLEPLLK 60
           +G+AIELY+DPALENQVLKAWNV+ARRQIST LIEMESRPHITLFS PFLEPSKLE LLK
Sbjct: 5   LGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLK 64

Query: 61  TLSTKHDPFPLSFSSVGAFPGD-HNXXXXXXXXXXXXXHFQSQLCDAIRKEGVDVPDEYA 119
             ++KHDP PL+FSS+  FP D  N             H QSQLCDAIRKEG+++ D+YA
Sbjct: 65  GFASKHDPLPLTFSSLATFPNDPDNLLFLAPTPSLSLLHLQSQLCDAIRKEGLEIGDDYA 124

Query: 120 LGSWIPFCSVAHQVPKARMAEAFSLLRDLKLPVSGYAVDVAVVQFSPVRELFSFVLGTT 178
             SWIP+CSVAH VPK RM EAFSLLR+LKLPVSGYA+D+A+VQFSPVRE+FSFVLG  
Sbjct: 125 FNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSPVREIFSFVLGNN 183


>Glyma19g01490.1 
          Length = 186

 Score =  255 bits (651), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 128/179 (71%), Positives = 146/179 (81%), Gaps = 1/179 (0%)

Query: 1   MGYAIELYMDPALENQVLKAWNVIARRQISTQLIEMESRPHITLFSTPFLEPSKLEPLLK 60
           +G+AIELY+DPALENQVLKAWNV+ARRQIST LIEMESRPHITLFS PFLEPSKLE LLK
Sbjct: 5   LGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLK 64

Query: 61  TLSTKHDPFPLSFSSVGAFPGD-HNXXXXXXXXXXXXXHFQSQLCDAIRKEGVDVPDEYA 119
             ++KHDP PL+FSS+  FP D  N             H QSQLCDAIRKEG+++ D+YA
Sbjct: 65  GFASKHDPLPLTFSSLATFPNDPDNLLFLAPTPSLSLLHLQSQLCDAIRKEGLEIGDDYA 124

Query: 120 LGSWIPFCSVAHQVPKARMAEAFSLLRDLKLPVSGYAVDVAVVQFSPVRELFSFVLGTT 178
             SWIP+CSVAH VPK RM EAFSLLR+LKLPVSGYA+D+A+VQFSPVRE+FSFVLG  
Sbjct: 125 FNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSPVREIFSFVLGNN 183


>Glyma06g37280.1 
          Length = 75

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 13/87 (14%)

Query: 52  PSKLEPLLKTLSTKHDPFPLSFSSVGAFPGDHNXXXXXXXXXXXXXHFQSQLCDAIRKEG 111
           PSKLE LLK   +KHDP PL+FSS+  FP D N                  LCDAIRK+G
Sbjct: 1   PSKLESLLKAFESKHDPLPLTFSSLATFPNDPNNLLFL-------------LCDAIRKKG 47

Query: 112 VDVPDEYALGSWIPFCSVAHQVPKARM 138
           + + D+YA  SWIP+CSVAH VP+ RM
Sbjct: 48  LKIDDDYAFNSWIPYCSVAHHVPQNRM 74