Miyakogusa Predicted Gene

Lj2g3v1014320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1014320.1 Non Chatacterized Hit- tr|D8UIB6|D8UIB6_VOLCA
Putative uncharacterized protein OS=Volvox carteri GN=,38.33,4e-18,no
description,NULL; seg,NULL; coiled-coil,NULL; Oxygen-evolving enhancer
protein 3,,PsbQ-like domai,CUFF.35902.1
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g01260.1                                                       355   3e-98
Glyma13g23850.1                                                       350   8e-97
Glyma15g34500.1                                                        73   3e-13

>Glyma19g01260.1 
          Length = 445

 Score =  355 bits (911), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 180/224 (80%), Positives = 190/224 (84%), Gaps = 15/224 (6%)

Query: 51  MAAITPCHYF-----------NTHSTRLTYPLPHTNARLRGFTARCSYQPPQHSQFQNKH 99
           MAAI PCHY            NTHS RL+YPL      LRGF ARCSYQPP HS+ QN H
Sbjct: 1   MAAIIPCHYCASLSPKWFNSNNTHSRRLSYPL----RGLRGFNARCSYQPPHHSESQNNH 56

Query: 100 EGRSFSLKHCAVSIALAVGLVTGVPTLGWPTDANAASPVLSDLSVLISGPPIKDPGALLR 159
            GRSFSLK CA+SIALAVGL+TGVPTL  PT A AA+PVLSDLSVLISGPPIKDPGALLR
Sbjct: 57  NGRSFSLKQCAISIALAVGLITGVPTLDGPTIAQAANPVLSDLSVLISGPPIKDPGALLR 116

Query: 160 YALPIDNKAVREVQKPLEDITDSLKIAGVKALDSVERNTRQASRALTQGKTLIISGLAES 219
           YALPIDNKA+REVQKPLEDIT+SLKIAGVKALDSVERN RQASR L QGKTLI+SGLAES
Sbjct: 117 YALPIDNKAIREVQKPLEDITESLKIAGVKALDSVERNVRQASRTLKQGKTLIVSGLAES 176

Query: 220 KKEHGVELLNKLEAGMDELELIIQDRNRDAVGPKQKELLQYVGG 263
           KKEHGVELL+KLEAG+DELELIIQDRNRDAV PKQKELLQYVGG
Sbjct: 177 KKEHGVELLSKLEAGIDELELIIQDRNRDAVAPKQKELLQYVGG 220


>Glyma13g23850.1 
          Length = 445

 Score =  350 bits (898), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 178/224 (79%), Positives = 188/224 (83%), Gaps = 15/224 (6%)

Query: 51  MAAITPCHYF-----------NTHSTRLTYPLPHTNARLRGFTARCSYQPPQHSQFQNKH 99
           MAAI PCHY            NTHS RL+YPL      LRG  ARCSYQPP HS+  N H
Sbjct: 1   MAAIIPCHYCASLSPRWFNSNNTHSRRLSYPL----RGLRGLNARCSYQPPHHSESPNNH 56

Query: 100 EGRSFSLKHCAVSIALAVGLVTGVPTLGWPTDANAASPVLSDLSVLISGPPIKDPGALLR 159
            GRSFSLK CA+SIALAVGL+TGVPTL  PT A AA+P LSDLSVLISGPPIKDPGALLR
Sbjct: 57  NGRSFSLKQCAISIALAVGLITGVPTLEGPTIAQAANPALSDLSVLISGPPIKDPGALLR 116

Query: 160 YALPIDNKAVREVQKPLEDITDSLKIAGVKALDSVERNTRQASRALTQGKTLIISGLAES 219
           YALPIDNKA+REVQKPLEDIT+SLKIAGVKALDSVERN RQASRAL QGKTLI+SGLAES
Sbjct: 117 YALPIDNKAIREVQKPLEDITESLKIAGVKALDSVERNVRQASRALKQGKTLIVSGLAES 176

Query: 220 KKEHGVELLNKLEAGMDELELIIQDRNRDAVGPKQKELLQYVGG 263
           KKEHGVELLNKLEAG+DELELI+QDRNRDAV PKQKELLQYVGG
Sbjct: 177 KKEHGVELLNKLEAGIDELELIVQDRNRDAVAPKQKELLQYVGG 220


>Glyma15g34500.1 
          Length = 41

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 40/52 (76%), Gaps = 11/52 (21%)

Query: 209 KTLIISGLAESKKEHGVELLNKLEAGMDELELIIQDRNRDAVGPKQKELLQY 260
           KTLI+SGLAESKKEHGVELLNKLE           DRNRDAV PKQKELLQY
Sbjct: 1   KTLIVSGLAESKKEHGVELLNKLE-----------DRNRDAVAPKQKELLQY 41