Miyakogusa Predicted Gene

Lj2g3v0946320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0946320.1 Non Chatacterized Hit- tr|A5AN10|A5AN10_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.19,5e-16,seg,NULL,CUFF.35832.1
         (230 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08800.1                                                       157   1e-38
Glyma05g08800.3                                                       125   4e-29
Glyma05g08800.2                                                       120   1e-27

>Glyma05g08800.1 
          Length = 259

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/228 (46%), Positives = 129/228 (56%), Gaps = 21/228 (9%)

Query: 8   NATKFVHLFRFKIXXXXXXXXXXXXRFNAFT-STTNCIKWKPDSVLRTLLKSKTLHLPFS 66
            ATK V+L+RF +            RFN FT +TT+  K+K         K+K L L  S
Sbjct: 6   QATKLVNLYRFCVSSSSSSIS----RFNHFTLTTTDYNKFKFACA-----KAKNLQLSLS 56

Query: 67  PRCSFNFQTHLTATASYLRNFRFSGG----GSIVLGLXXXXXXXXXXXHAMDAGDAFVDD 122
            R +F F + L   A+YLR++R SG     GSI   L           HAMDAGDA VDD
Sbjct: 57  QR-AFVFLSPLNVAANYLRSYRVSGSYICSGSI---LGVSIASAPIIAHAMDAGDALVDD 112

Query: 123 PRNDSQDPSKEEENGDQLWNLTRKFWLPVLFFLTVLSNLEDPXXXXXXXXXXXXXXXXPN 182
             ++SQD S+EE +   L  L RK WLP  FFLTVLSNL D                 P+
Sbjct: 113 --HESQDLSEEEIDVHHLLRLARKLWLPAFFFLTVLSNLGDSITILFIKLTLFLLSTKPS 170

Query: 183 PFSVYIFVDQLCQQYVHQGHQFLK-KSVYASKVEVQDYTLLCLAAVEI 229
           PFSVY+FVD+LCQQ++ Q  +F K KS+YASKVEVQDY LLCLA VE+
Sbjct: 171 PFSVYVFVDKLCQQHMRQETRFFKAKSLYASKVEVQDYKLLCLADVEV 218


>Glyma05g08800.3 
          Length = 196

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 108/204 (52%), Gaps = 20/204 (9%)

Query: 8   NATKFVHLFRFKIXXXXXXXXXXXXRFNAFT-STTNCIKWKPDSVLRTLLKSKTLHLPFS 66
            ATK V+L+RF +            RFN FT +TT+  K+K         K+K L L  S
Sbjct: 6   QATKLVNLYRFCVSSSSSSIS----RFNHFTLTTTDYNKFKFACA-----KAKNLQLSLS 56

Query: 67  PRCSFNFQTHLTATASYLRNFRFSGG----GSIVLGLXXXXXXXXXXXHAMDAGDAFVDD 122
            R +F F + L   A+YLR++R SG     GSI   L           HAMDAGDA VDD
Sbjct: 57  QR-AFVFLSPLNVAANYLRSYRVSGSYICSGSI---LGVSIASAPIIAHAMDAGDALVDD 112

Query: 123 PRNDSQDPSKEEENGDQLWNLTRKFWLPVLFFLTVLSNLEDPXXXXXXXXXXXXXXXXPN 182
             ++SQD S+EE +   L  L RK WLP  FFLTVLSNL D                 P+
Sbjct: 113 --HESQDLSEEEIDVHHLLRLARKLWLPAFFFLTVLSNLGDSITILFIKLTLFLLSTKPS 170

Query: 183 PFSVYIFVDQLCQQYVHQGHQFLK 206
           PFSVY+FVD+LCQQ++ Q  +F K
Sbjct: 171 PFSVYVFVDKLCQQHMRQETRFFK 194


>Glyma05g08800.2 
          Length = 158

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 77/116 (66%), Gaps = 3/116 (2%)

Query: 115 AGDAFVDDPRNDSQDPSKEEENGDQLWNLTRKFWLPVLFFLTVLSNLEDPXXXXXXXXXX 174
           AGDA VDD  ++SQD S+EE +   L  L RK WLP  FFLTVLSNL D           
Sbjct: 4   AGDALVDD--HESQDLSEEEIDVHHLLRLARKLWLPAFFFLTVLSNLGDSITILFIKLTL 61

Query: 175 XXXXXXPNPFSVYIFVDQLCQQYVHQGHQFLK-KSVYASKVEVQDYTLLCLAAVEI 229
                 P+PFSVY+FVD+LCQQ++ Q  +F K KS+YASKVEVQDY LLCLA VE+
Sbjct: 62  FLLSTKPSPFSVYVFVDKLCQQHMRQETRFFKAKSLYASKVEVQDYKLLCLADVEV 117