Miyakogusa Predicted Gene

Lj2g3v0934150.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0934150.2 tr|K1R1U0|K1R1U0_CRAGI Denticleless-like protein
(Fragment) OS=Crassostrea gigas PE=4 SV=1,31.43,2e-18,WD40,WD40
repeat; no description,WD40/YVTN repeat-like-containing domain;
LETHAL(2)DENTICLELESS PROT,CUFF.35817.2
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g00350.1                                                       282   2e-76
Glyma05g08840.1                                                       275   3e-74
Glyma05g02850.1                                                        62   7e-10
Glyma17g13520.1                                                        60   1e-09
Glyma10g33580.1                                                        50   3e-06

>Glyma19g00350.1 
          Length = 506

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 142/215 (66%), Positives = 174/215 (80%), Gaps = 2/215 (0%)

Query: 1   MSITSVLYLKDQVSIATAGAVESVLKFWDTRNLKSIVTQTCPHPQSTEKQ-VHGITSLSQ 59
           MSITSVL LKDQVSIATAGAV+SVLKFWDTRNLKS VTQT P PQSTEKQ +HGI+SLSQ
Sbjct: 219 MSITSVLCLKDQVSIATAGAVDSVLKFWDTRNLKSTVTQTSPSPQSTEKQTLHGISSLSQ 278

Query: 60  DDSGLFLTASCMDNRVYLYNTLQLEKGHFKSFSGCQIESFFVKAAISPDASHIVCGSTNG 119
           D+SGLFL+ASCMDNR+YLYNTLQLEKG  KSFSGC+IESFFVK+AISPDAS+IV GS++G
Sbjct: 279 DESGLFLSASCMDNRIYLYNTLQLEKGPLKSFSGCRIESFFVKSAISPDASNIVSGSSDG 338

Query: 120 RPCVWRVNKP-QDYSILKSHYEEVTAVDWCSSDINKFATASDDPSVHVWRQSSSIRTKET 178
              VW+V+KP +D +ILKSH  EVTAVDWCSS+I K AT SDD +V  W ++S + + + 
Sbjct: 339 NAYVWKVDKPLEDPTILKSHDGEVTAVDWCSSEIGKLATCSDDFTVRTWNKNSYVSSTQC 398

Query: 179 PLPLRRRIINMPSCHYTLVSDNEETRRKQDAEAFL 213
              +RRR++ +PS    ++ +N +   K + +AFL
Sbjct: 399 ASAIRRRVMAIPSIECKMLLNNGKRYSKTNEDAFL 433


>Glyma05g08840.1 
          Length = 492

 Score =  275 bits (702), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/216 (64%), Positives = 174/216 (80%), Gaps = 3/216 (1%)

Query: 1   MSITSVLYLKDQVSIATAGAVESVLKFWDTRNLKSIVTQTCPHPQSTEKQ-VHGITSLSQ 59
           MSITSVL LKDQVSIATAGAV+SVLKFWDTRNLKS VTQT P PQS EKQ +HGI+SLSQ
Sbjct: 202 MSITSVLCLKDQVSIATAGAVDSVLKFWDTRNLKSTVTQTSPSPQSAEKQTLHGISSLSQ 261

Query: 60  DDSGLFLTASCMDNRVYLYNTLQLEKGHFKSFSGCQIESFFVKAAISPDASHIVCGSTNG 119
           D+SGLFL+ASCMDNR+YLYNTLQL+KG  KSFSGC+IESFFVK+AISPDAS+IV GS++G
Sbjct: 262 DESGLFLSASCMDNRIYLYNTLQLDKGPLKSFSGCRIESFFVKSAISPDASNIVSGSSDG 321

Query: 120 RPCVWRVNKP-QDYSILKSHYE-EVTAVDWCSSDINKFATASDDPSVHVWRQSSSIRTKE 177
              VW+V+KP +D +ILKSH + EVTAVDWCSS+I K AT SDD +V  W ++S + + +
Sbjct: 322 NAYVWKVDKPLEDPTILKSHDDGEVTAVDWCSSEIGKLATCSDDFTVRTWNKNSYVSSIQ 381

Query: 178 TPLPLRRRIINMPSCHYTLVSDNEETRRKQDAEAFL 213
               +RRR++ +PS    ++ +N +   K + +AFL
Sbjct: 382 CASAIRRRVMAIPSIECKMLLNNGKRYSKTNEDAFL 417


>Glyma05g02850.1 
          Length = 514

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 13/152 (8%)

Query: 18  AGAVESVLKFWDTRNLKSIVTQTCPHPQSTEKQVHGITSLSQDDSGLFLTASCMDNRVYL 77
           +G V+  L+ WD ++ K ++++   H  +       +TSLS   +G  +  S  DN   L
Sbjct: 373 SGHVDGNLRLWDIQSGK-LLSEVAAHSLA-------VTSLSLSRNGNVVLTSGRDNLHNL 424

Query: 78  YNTLQLEK-GHFKSFSGCQIESFFVKAAISPDASHIVCGSTNGRPCVWRVNKPQDYSILK 136
           ++   LE  G  K+  G ++ S + ++ ISPD +H+  GS +G   +W ++K    S LK
Sbjct: 425 FDVRSLEVCGTLKAM-GNRVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLK 483

Query: 137 SHYEEVTAVDWCSSDINK-FATASDDPSVHVW 167
            H   V    W  S I K  A+A  +  V VW
Sbjct: 484 EHTSSVLCCRW--SGIGKPLASADKNGIVCVW 513


>Glyma17g13520.1 
          Length = 514

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 13/152 (8%)

Query: 18  AGAVESVLKFWDTRNLKSIVTQTCPHPQSTEKQVHGITSLSQDDSGLFLTASCMDNRVYL 77
           +G V+  L+ WD +  K ++++   H  +       +TSLS   +G  +  S  DN   L
Sbjct: 373 SGHVDGNLRLWDIQTGK-LLSEVAAHSLA-------VTSLSLSRNGNVVLTSGRDNLHNL 424

Query: 78  YNTLQLEK-GHFKSFSGCQIESFFVKAAISPDASHIVCGSTNGRPCVWRVNKPQDYSILK 136
           ++   LE  G  K+  G ++ S + ++ ISPD +H+  GS +G   +W ++K    S LK
Sbjct: 425 FDVRSLEVCGTLKAM-GNRVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLK 483

Query: 137 SHYEEVTAVDWCSSDINK-FATASDDPSVHVW 167
            H   V    W  S I K  A+A  +  V VW
Sbjct: 484 EHTSSVLCCRW--SGIAKPLASADKNGIVCVW 513


>Glyma10g33580.1 
          Length = 565

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 47  TEKQVHGITSLSQDDSGLFLTASCMDNRVYLYNT---LQLEKGHFKSFSGCQIESFFVKA 103
           +E  +H + S+S   +  +L A  +DN++ +Y+T    QL K   K F G  +  +  + 
Sbjct: 443 SEPHMHSMPSISLHPNANWLAAQSLDNQILIYSTREKFQLNKK--KRFGGHIVAGYACQV 500

Query: 104 AISPDASHIVCGSTNGRPCVWRVNKPQDYSILKSHYEEVTAVDWCSSDINKFATASDDPS 163
             SPD   ++ G   G+   W     + Y  LK H       +W   + +K AT   D  
Sbjct: 501 NFSPDGRFVMSGDGEGKCWFWDWKTCKVYRTLKCHEGVCIGCEWHPLEQSKVATCGWDGM 560

Query: 164 VHVW 167
           +  W
Sbjct: 561 IKYW 564