Miyakogusa Predicted Gene
- Lj2g3v0932920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0932920.1 Non Chatacterized Hit- tr|G5DXD8|G5DXD8_SILLA
Putative uncharacterized protein (Fragment) OS=Silene
,31.67,4e-18,coiled-coil,NULL; DUF1421,Protein of unknown function
DUF1421; seg,NULL; SUBFAMILY NOT NAMED,NULL; F,CUFF.35825.1
(516 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g00490.1 313 2e-85
Glyma05g08930.2 272 7e-73
Glyma05g08930.1 272 7e-73
Glyma05g08940.1 114 4e-25
Glyma06g45800.1 72 2e-12
Glyma12g12740.1 71 3e-12
Glyma12g12740.2 71 3e-12
Glyma12g33150.1 65 1e-10
Glyma13g37300.1 64 4e-10
>Glyma19g00490.1
Length = 578
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/345 (54%), Positives = 203/345 (58%), Gaps = 24/345 (6%)
Query: 1 MNTTPFMDKQIMDLTHGSSSPQQ----QSHTNDFIDLMKXXXXXXXXXXXXXXXXXXXXX 56
MNTTPFMDKQIMDLTH S Q + DFIDLMK
Sbjct: 1 MNTTPFMDKQIMDLTHAHGSSSSSSTTQLQSKDFIDLMKEPPQNQHNHHHHHLEDEDEEE 60
Query: 57 XXXNLNHHRVVEDEGRGGGNGINTDDIVPSYDFKPIRPLAASNYDSAPNLSAAFSRPWNS 116
GNGI+ DDIVPSYDF+PIRPLAASN ++ SAAFSRPWNS
Sbjct: 61 KASR--------------GNGISKDDIVPSYDFQPIRPLAASNSNNF--DSAAFSRPWNS 104
Query: 117 DSNQ----PITKSYSSLDSIEPLKVNVEKDRNAFDPQILSEIDQTVKKHTENLLHVLEGV 172
DSN PI K+Y+SLDS+EP KV VEKD++AFD +LSEID+TVKKH EN+LHVLEGV
Sbjct: 105 DSNSNASPPILKNYNSLDSMEPAKVIVEKDQSAFDATMLSEIDRTVKKHMENMLHVLEGV 164
Query: 173 SARLTQLETRTRHLENSMDDLKVSVGNNHGSTDGKFRQLENILREVQSGVQTIKDKQDIV 232
SARLTQLETRT HLENS+DDLKVSVGN+HGSTDGK RQ+EN LREVQSGVQTIKDKQDIV
Sbjct: 165 SARLTQLETRTHHLENSVDDLKVSVGNSHGSTDGKLRQMENSLREVQSGVQTIKDKQDIV 224
Query: 233 XXXXXXXXXXVSKTDQQSETQTSAGTDPVXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXX 292
VSKTD QSETQTS TDPV
Sbjct: 225 QAQLQLAKLEVSKTDPQSETQTSTITDPVQQAAFAPGQTQPQLPTPANLPQSIPIVPPPN 284
Query: 293 XXXXXXXXXXXXXXXXXXXXXXXTQIPAVPQRDPYFPPPVQSQET 337
QIPA PQRD YFPPPVQSQET
Sbjct: 285 APPQPSPQQGLPPPVHLPNQFPQNQIPAAPQRDQYFPPPVQSQET 329
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 50/133 (37%), Gaps = 37/133 (27%)
Query: 395 GHHVEE---------------PPYVPSQTYPPNLRXXXXXXXXXXXXXXXXXFYGTAPHA 439
GHHVEE P P+ PP FYGT PHA
Sbjct: 390 GHHVEEPPYPPQNYPPNVRQPPSQSPTGPPPPQ------------------QFYGTPPHA 431
Query: 440 YEXXXXXXXXXXXXXXXXXXXXAEXXX----XXXXXXXXXXXXXLPTASLAVSGGSGYPQ 495
YE AE LPTAS+A SGGSGYPQ
Sbjct: 432 YEPPSSRSGSGYSSGYGTLSGPAEQYRYGGPPQYAGTPALKPQQLPTASVAPSGGSGYPQ 491
Query: 496 LPTARVLPQAIPT 508
LPTARVLPQAIPT
Sbjct: 492 LPTARVLPQAIPT 504
>Glyma05g08930.2
Length = 949
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 175/341 (51%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 1 MNTTPFMDKQIMDLTHG---SSSPQQQSHTNDFIDLMKXXXXXXXXXXXXXXXXXXXXXX 57
MNTTPFMDKQIMDLTHG SSS QS + DFIDLMK
Sbjct: 378 MNTTPFMDKQIMDLTHGHGSSSSSTTQSQSKDFIDLMKEPPQHHHHHHLEDE-------- 429
Query: 58 XXNLNHHRVVEDEGRGGGNGINTDDIVPSYDFKPIRPLAASNYDSAPNLSAAFSRPWNSD 117
++E + GNGI+ DDIVP FK + L + + R
Sbjct: 430 --------DNDEEEKARGNGISKDDIVPK--FKLVAKLCSMKHPLTRTWLIHLIRSVRQV 479
Query: 118 SNQPITKS-YSSLDSIEPLKVNVEKDRNAFDPQILSEIDQTVKKHTENLLHVLEGVSARL 176
SN+ S YSSLDS+EP KV VEKDR+AFD +LSEID+T+KKH EN+LHVLEGVSARL
Sbjct: 480 SNKFWDVSNYSSLDSMEPAKVIVEKDRSAFDATMLSEIDRTMKKHMENMLHVLEGVSARL 539
Query: 177 TQLETRTRHLENSMDDLKVSVGNNHGSTDGKFRQLENILREVQSGVQTIKDKQDIVXXXX 236
TQLETRT HLENS+DDLKVSVGNNHGSTDGK RQLENILREVQSGVQTIKDKQDIV
Sbjct: 540 TQLETRTHHLENSVDDLKVSVGNNHGSTDGKLRQLENILREVQSGVQTIKDKQDIVQAQL 599
Query: 237 XXXXXXVSKTDQQSETQTSAGTDPVXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXX 296
VSKTDQQSE QTSA T+PV
Sbjct: 600 QLAKLQVSKTDQQSEMQTSAITNPVQQAASAPVQSQPQLPTPANLPQSIPVVPPPNAPPQ 659
Query: 297 XXXXXXXXXXXXXXXXXXXTQIPAVPQRDPYFPPPVQSQET 337
QIPA PQRDPYFPPPVQSQET
Sbjct: 660 PPPQQGLPPPVQLPNQFSQNQIPAAPQRDPYFPPPVQSQET 700
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 31/33 (93%)
Query: 480 LPTASLAVSGGSGYPQLPTARVLPQAIPTASAV 512
LPTASLA S GSGYPQLPTARVLPQAIPTASAV
Sbjct: 847 LPTASLAPSSGSGYPQLPTARVLPQAIPTASAV 879
>Glyma05g08930.1
Length = 949
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 175/341 (51%), Positives = 192/341 (56%), Gaps = 22/341 (6%)
Query: 1 MNTTPFMDKQIMDLTHG---SSSPQQQSHTNDFIDLMKXXXXXXXXXXXXXXXXXXXXXX 57
MNTTPFMDKQIMDLTHG SSS QS + DFIDLMK
Sbjct: 378 MNTTPFMDKQIMDLTHGHGSSSSSTTQSQSKDFIDLMKEPPQHHHHHHLEDE-------- 429
Query: 58 XXNLNHHRVVEDEGRGGGNGINTDDIVPSYDFKPIRPLAASNYDSAPNLSAAFSRPWNSD 117
++E + GNGI+ DDIVP FK + L + + R
Sbjct: 430 --------DNDEEEKARGNGISKDDIVPK--FKLVAKLCSMKHPLTRTWLIHLIRSVRQV 479
Query: 118 SNQPITKS-YSSLDSIEPLKVNVEKDRNAFDPQILSEIDQTVKKHTENLLHVLEGVSARL 176
SN+ S YSSLDS+EP KV VEKDR+AFD +LSEID+T+KKH EN+LHVLEGVSARL
Sbjct: 480 SNKFWDVSNYSSLDSMEPAKVIVEKDRSAFDATMLSEIDRTMKKHMENMLHVLEGVSARL 539
Query: 177 TQLETRTRHLENSMDDLKVSVGNNHGSTDGKFRQLENILREVQSGVQTIKDKQDIVXXXX 236
TQLETRT HLENS+DDLKVSVGNNHGSTDGK RQLENILREVQSGVQTIKDKQDIV
Sbjct: 540 TQLETRTHHLENSVDDLKVSVGNNHGSTDGKLRQLENILREVQSGVQTIKDKQDIVQAQL 599
Query: 237 XXXXXXVSKTDQQSETQTSAGTDPVXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXX 296
VSKTDQQSE QTSA T+PV
Sbjct: 600 QLAKLQVSKTDQQSEMQTSAITNPVQQAASAPVQSQPQLPTPANLPQSIPVVPPPNAPPQ 659
Query: 297 XXXXXXXXXXXXXXXXXXXTQIPAVPQRDPYFPPPVQSQET 337
QIPA PQRDPYFPPPVQSQET
Sbjct: 660 PPPQQGLPPPVQLPNQFSQNQIPAAPQRDPYFPPPVQSQET 700
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 31/33 (93%)
Query: 480 LPTASLAVSGGSGYPQLPTARVLPQAIPTASAV 512
LPTASLA S GSGYPQLPTARVLPQAIPTASAV
Sbjct: 847 LPTASLAPSSGSGYPQLPTARVLPQAIPTASAV 879
>Glyma05g08940.1
Length = 101
Score = 114 bits (284), Expect = 4e-25, Method: Composition-based stats.
Identities = 61/83 (73%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Query: 140 EKDRNAFDPQILSEIDQTVKK-HTENLLHVLEGVSARLTQLETRTRHLENSMDDLKVSVG 198
EKDR A D +LS+ID+T KK H EN+LHVL G SARLTQLETRT HLENS+++LKVSVG
Sbjct: 3 EKDRCASDATMLSKIDRTKKKKHKENMLHVLAGASARLTQLETRTHHLENSVENLKVSVG 62
Query: 199 NNHGSTDGKFRQLENILREVQSG 221
NNHGSTDGK RQL NIL EV S
Sbjct: 63 NNHGSTDGKLRQLANILGEVFSA 85
>Glyma06g45800.1
Length = 468
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 56/83 (67%)
Query: 150 ILSEIDQTVKKHTENLLHVLEGVSARLTQLETRTRHLENSMDDLKVSVGNNHGSTDGKFR 209
+++ +++++KK+ +NL+ LEG+S+RL+QLE +L+ S+ ++K + +H D + +
Sbjct: 73 VIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKSDINRDHVEQDSRLK 132
Query: 210 QLENILREVQSGVQTIKDKQDIV 232
LE ++EV VQ ++DKQ++
Sbjct: 133 SLEKHVQEVHRSVQILRDKQELA 155
>Glyma12g12740.1
Length = 534
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 56/83 (67%)
Query: 150 ILSEIDQTVKKHTENLLHVLEGVSARLTQLETRTRHLENSMDDLKVSVGNNHGSTDGKFR 209
+++ +++++KK+ +NL+ LEG+S+RL+QLE +L+ S+ ++K + +H + + +
Sbjct: 70 VIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKCDINRDHVEQESRLK 129
Query: 210 QLENILREVQSGVQTIKDKQDIV 232
LE ++EV VQ ++DKQ++
Sbjct: 130 SLEKHVQEVHRSVQILRDKQELA 152
>Glyma12g12740.2
Length = 533
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 56/83 (67%)
Query: 150 ILSEIDQTVKKHTENLLHVLEGVSARLTQLETRTRHLENSMDDLKVSVGNNHGSTDGKFR 209
+++ +++++KK+ +NL+ LEG+S+RL+QLE +L+ S+ ++K + +H + + +
Sbjct: 69 VIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKCDINRDHVEQESRLK 128
Query: 210 QLENILREVQSGVQTIKDKQDIV 232
LE ++EV VQ ++DKQ++
Sbjct: 129 SLEKHVQEVHRSVQILRDKQELA 151
>Glyma12g33150.1
Length = 532
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 53/83 (63%)
Query: 150 ILSEIDQTVKKHTENLLHVLEGVSARLTQLETRTRHLENSMDDLKVSVGNNHGSTDGKFR 209
+++ +++++K H +NL+ LEG+S RL+QLE +L+ S+ ++ + +H TD K +
Sbjct: 75 VIAIVEKSMKTHADNLMRFLEGLSTRLSQLELYCYNLDKSIGAMQSDLTCDHEETDSKLK 134
Query: 210 QLENILREVQSGVQTIKDKQDIV 232
L+ L+EV V ++DKQ++
Sbjct: 135 SLDKHLQEVHRSVLILRDKQELA 157
>Glyma13g37300.1
Length = 454
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 73 GGGNG--INTDDIVPSYDFKPIRPLAASNYDSAPNLSAAFSRPWNSDSNQPITKSYSSL- 129
GG NG + + DI+ SYD + +N+DS+ N P S++S
Sbjct: 11 GGSNGFDLGSGDILYSYDEEDY-----TNHDSS-----------NGTHIDPTKDSHASRM 54
Query: 130 --DSIEPLKVNVEKDRNAFDPQILSEIDQTVKKHTENLLHVLEGVSARLTQLETRTRHLE 187
SI P ++ +++ +++++K H +NL+ LEG+ RL+QLE +L+
Sbjct: 55 GRTSIVPATA-YSPSEDSLSQDVIATVEKSMKTHADNLMQFLEGLGTRLSQLELYCYNLD 113
Query: 188 NSMDDLKVSVGNNHGSTDGKFRQLENILREVQSGVQTIKDKQDIV 232
S+ ++ + +H TD K L+ L+EV V +KD+Q++
Sbjct: 114 KSIGAMRSDLTCDHEETDSKLNSLDKHLQEVHRSVLILKDRQELA 158