Miyakogusa Predicted Gene

Lj2g3v0920490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0920490.1 Non Chatacterized Hit- tr|B6TTM1|B6TTM1_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,65.62,0.000000000000001,no description,Ribosomal protein S5
domain 2-type fold, subgroup; no description,NULL;
GHMP_kinases_,CUFF.35763.1
         (356 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g09130.1                                                       598   e-171
Glyma19g00660.1                                                        78   1e-14

>Glyma05g09130.1 
          Length = 357

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 284/353 (80%), Positives = 316/353 (89%)

Query: 4   VSDNVVIEHKAYARVGLLGNPSDVYYGNTISLNIANFYATVKLVPSKDLFIQPHPIHDLV 63
           +    VI HKAYARVGLLGNPSDVYYG TI+L++ANF+ATV L PS  L +QPHP+HDL+
Sbjct: 3   IDSEYVISHKAYARVGLLGNPSDVYYGKTIALSVANFFATVTLRPSDQLILQPHPLHDLL 62

Query: 64  HFESLRQMVGRVNSDGYYGGVRLLMAICKVFHNYCKEKSIALHDRNFTLSYDTNIPRQSG 123
           HF SL Q+V R++S GYYGGVRLLMAIC VF+ YC+E +I L D NFTLSYDTNIPRQ+G
Sbjct: 63  HFSSLPQLVNRLSSQGYYGGVRLLMAICNVFYAYCRENAIDLGDDNFTLSYDTNIPRQAG 122

Query: 124 LSGSSGIVCAALNCFLDFYNVRHLIKVEERPNLILAAEGELGIVAGLQDRVVQVYGGLVY 183
           LSGSSGIVCAALNC LDFYNVRHL+KVE RPNLILAAE ELGIVAGLQDRV QVYGGLVY
Sbjct: 123 LSGSSGIVCAALNCLLDFYNVRHLVKVEVRPNLILAAEKELGIVAGLQDRVAQVYGGLVY 182

Query: 184 MDFSREIMDKKGHGIYIPMDLSLLPPLYLIYAVNPRDSGKVHSKVRQRWLDGDKFIVSSM 243
           MDFS+E M++ GHG+Y+P+DLSLLPPLYLIYA NP DSGKVHSKVRQRWLDGD+FIVSSM
Sbjct: 183 MDFSKENMNELGHGVYVPVDLSLLPPLYLIYAENPSDSGKVHSKVRQRWLDGDEFIVSSM 242

Query: 244 LEVANIAKEGKTALEEKDYSKFAALMNRNFELRRLMFGDEALGDVNIKMVEVARKVGAAS 303
           LE+ANIA+EGKTALEEKDYSKFAALMNRNF+LRRLMFGD+ALGD+N+KMVEVARKVGAAS
Sbjct: 243 LEIANIAQEGKTALEEKDYSKFAALMNRNFDLRRLMFGDDALGDLNLKMVEVARKVGAAS 302

Query: 304 KFTGSGGAVVAFCPEGTSQVKRLEDECHKAGFEMELLEPFPSRLNEFDLKTLR 356
           KFTGSGGAVVAFCPEGTSQVK LEDEC K GF +  +EP PSRLNE DLKTL+
Sbjct: 303 KFTGSGGAVVAFCPEGTSQVKLLEDECQKEGFVILPIEPLPSRLNEIDLKTLQ 355


>Glyma19g00660.1 
          Length = 142

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 62/133 (46%), Gaps = 50/133 (37%)

Query: 4   VSDNVVIEHKAYARVGLLGNPSDVYYGNTISLNIANFYATVKLVPSKDLFIQPHPIHDLV 63
           +  + VI HKAYARVGLLGNPSDVYYG TIS ++ANF +TV L PS +      P+HD  
Sbjct: 3   IDSDSVISHKAYARVGLLGNPSDVYYGKTISFSVANFCSTVTLGPSDE------PLHD-- 54

Query: 64  HFESLRQMVGRVNSDGYYGGVRLLMAICKVFHNYCKEKSIALHDRNFTLSYDTNIPRQS- 122
                                                    L D NFT SY  NIPRQ+ 
Sbjct: 55  -----------------------------------------LRDHNFTPSYAINIPRQNK 73

Query: 123 GLSGSSGIVCAAL 135
           G+ G S  + A L
Sbjct: 74  GIKGPSTNIRAKL 86



 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 24/80 (30%)

Query: 277 RLMFGDEALGDVNIKMVEVARKVGAASKFTGSGGAVVAFCPEGTSQVKRLEDECHKAGFE 336
           +LMFG +ALGD+N+KMVEVAR+VGAASKFT                         K GF 
Sbjct: 85  KLMFGGDALGDLNLKMVEVARQVGAASKFT------------------------QKEGFV 120

Query: 337 MELLEPFPSRLNEFDLKTLR 356
           +  +EPFPSRLNE DLKTL+
Sbjct: 121 ILPIEPFPSRLNEIDLKTLQ 140