Miyakogusa Predicted Gene

Lj2g3v0919480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0919480.1 tr|B9DHJ7|B9DHJ7_ARATH AT5G16210 protein
(Fragment) OS=Arabidopsis thaliana GN=AT5G16210 PE=2
SV=1,35.71,0.0000000000003,LISH,LisH dimerisation motif; Lissencephaly
type-1-like homology motif,LisH dimerisation motif; SUBF,CUFF.35759.1
         (498 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g09170.1                                                       566   e-161
Glyma02g09790.1                                                       503   e-142
Glyma19g00740.1                                                        68   3e-11

>Glyma05g09170.1 
          Length = 1176

 Score =  566 bits (1459), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 322/495 (65%), Positives = 363/495 (73%), Gaps = 35/495 (7%)

Query: 19  MDVERASLCNLVVNFLLEENYILTAFELLHELLDNGRNNQAIRLQQYFSDPSLFPPNQIS 78
           M+VER+SLCN VVNFLLEENY+LTAFELLHELLD+GR++QAIRLQQYFSDP+ FPPNQIS
Sbjct: 1   MEVERSSLCNCVVNFLLEENYLLTAFELLHELLDDGRHDQAIRLQQYFSDPARFPPNQIS 60

Query: 79  RFNSLPLADPQTLLQQKEAAEEKLAVTDYELRLAREDIVKLKSELQTKVECLNQLYA--- 135
           R NSLP ADPQTLLQ K  ++ KL++TDYELRLA EDI KLKS          QLYA   
Sbjct: 61  RLNSLPTADPQTLLQLKNESDHKLSITDYELRLANEDIAKLKS----------QLYAAEA 110

Query: 136 --KSSGDASVNNELQIQQR------NGDISFTY--LGPLRDSERRDLNCAVKEYLLIAGY 185
              +SG  S   E QIQ++      N   SFT   LGPL+D+ERRDLNCAVKEYLLIAGY
Sbjct: 111 PQSNSGHVS---EGQIQEQKPNHNNNHSSSFTASSLGPLKDTERRDLNCAVKEYLLIAGY 167

Query: 186 RLTAMTFYEEVTDQNLDIWQNTHALIPDALRHYYYQYLLSTSEAAEEKIAQVLENETLLK 245
           RLTAMTFYEEVTDQNLD WQNT AL+P ALRHYYYQYLLSTSE AEEKIAQV EN TLLK
Sbjct: 168 RLTAMTFYEEVTDQNLDNWQNTSALMPQALRHYYYQYLLSTSEVAEEKIAQVPENITLLK 227

Query: 246 ANQRLSQEKESLLKGKDLSDGQIGALTKSLETLQGDLKHKEDLVLVLNKSLENQREELHA 305
            N+RL+QEKESLLK KDL+DGQI ALTKSLE LQ DLK KE++V VL +SLENQR+ LHA
Sbjct: 228 ENERLNQEKESLLKDKDLADGQIAALTKSLEALQRDLKEKENMVQVLKQSLENQRKGLHA 287

Query: 306 SRVETSKLKMHIEGSGSGKNLVVSDVDNFQPESIDKYKEEIKKLQMEIEGLKEKNKGPPE 365
           SRVE SKLKM IEGSGSG +LVVSDVDNFQP S+D+YKEEIKKLQME+E LKEKN G PE
Sbjct: 288 SRVEISKLKMSIEGSGSGNSLVVSDVDNFQPVSLDEYKEEIKKLQMEVERLKEKNIGIPE 347

Query: 366 NGIFV-PENEIMQTEDKVIEIHEDQGAISHPVEVALDVVQDEDAHSPVVQTLNYYADK-H 423
            G FV  ENE +Q EDKV EIHEDQGAIS+ V    D  QD      ++Q +     K  
Sbjct: 348 PGNFVGSENETLQIEDKVREIHEDQGAISYHV----DAPQDMHCMHYLIQQMEIVLLKIL 403

Query: 424 KDSQHTLFDPANANSAFESIENVSAHDGGKQEQDSRCAKSGNVDDEAISEKKGLGTIQIL 483
             S + +       +A   + +          +     KS + +D     K GLGTIQIL
Sbjct: 404 IMSLNKMLASKKGITALTFLHHYPIIFAALLSEFGYDNKSNSSNDLV---KLGLGTIQIL 460

Query: 484 ADALPKIVPYVLINH 498
           ADALPKIVPYVLINH
Sbjct: 461 ADALPKIVPYVLINH 475


>Glyma02g09790.1 
          Length = 1160

 Score =  503 bits (1294), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 290/485 (59%), Positives = 353/485 (72%), Gaps = 32/485 (6%)

Query: 19  MDVERASLCNLVVNFLLEENYILTAFELLHELLDNGRNNQAIRLQQYFSDPSLFPPNQIS 78
           MDVER+SLCN VVNFLLEENY+LTAFELLHELLD+GR++QAIRL+Q+FSDP+LFPP+ IS
Sbjct: 1   MDVERSSLCNCVVNFLLEENYLLTAFELLHELLDDGRDDQAIRLKQFFSDPNLFPPDLIS 60

Query: 79  RFNSLPLADPQTLLQQKEAAEEKLAVTDYELRLAREDIVKLKSELQTKVECLNQLYA-KS 137
           R NSL +ADPQTLL++KEAAEEKLA++DYELRLA+EDI KLKSELQ K E  N+L A K 
Sbjct: 61  RLNSLRVADPQTLLEEKEAAEEKLAISDYELRLAQEDISKLKSELQKKAENHNELKAEKI 120

Query: 138 SGDASVNNELQIQQRNGDISFTYLGPLRDSERRDLNCAVKEYLLIAGYRLTAMTFYEEVT 197
           SGD SVN+  QIQQ+    SFT LGPL+++ERRDLNCAVKEYLLIAGYRLTAMTFYEEVT
Sbjct: 121 SGDVSVNDGQQIQQKKNS-SFTDLGPLKETERRDLNCAVKEYLLIAGYRLTAMTFYEEVT 179

Query: 198 DQNLDIWQNTHALIPDALRHYYYQYLLSTSEAAEEKIAQVLENETLLKANQRLSQEKESL 257
           DQNLD W NT A +PDALRHYYYQYL STSEAAEEK + + ENETLL AN+RL+QEKE+L
Sbjct: 180 DQNLDSWHNTPASVPDALRHYYYQYLSSTSEAAEEKFSLLRENETLLNANKRLNQEKENL 239

Query: 258 LKGKDLSDGQIGALTKSLETLQGDLKHKEDLVLVLNKSLENQREELHASRVETSKLKMHI 317
           LK KD++D QI  LTKSL+ +Q DLK KE+LV VL +SLE+QR+EL+  R E + LK+HI
Sbjct: 240 LKNKDMADAQIVTLTKSLDAMQKDLKDKENLVQVLKQSLEHQRKELNDCRAEITSLKVHI 299

Query: 318 EGSGSGKNLVVSDVDNFQPESIDKYKEEIKKLQMEIEGLKEKNKGPPENGIFVPENEIMQ 377
           EGS  G NLV+SDV+N Q ES++KYKEE+KKLQME E LKEKN   PE G F     +  
Sbjct: 300 EGSHLGNNLVISDVNNVQSESLEKYKEEMKKLQMENEWLKEKNIRSPEPGNFTKVQSL-- 357

Query: 378 TEDKVIEIHEDQGAISHPVEVALDVVQDEDAHSPVVQTLNYYADKHKDSQHTLFDPANAN 437
           T    + +      ++H +   L           +   +N      KDS           
Sbjct: 358 TLLMWLWVLYTMKMLNHQLFKLL-----------LSMLINMRIHCLKDSSLL-------- 398

Query: 438 SAFESIENVSAHDGGKQEQDSRCAKSGNVDDEAI----SEKKGLGTIQILADALPKIVPY 493
                +++ S +DG   E+ + C K   + + ++      ++GLGTIQILADALPKIVPY
Sbjct: 399 -----VKSDSVNDGAISERTATCLKIIKIKNFSLLYPKEMRRGLGTIQILADALPKIVPY 453

Query: 494 VLINH 498
           VLINH
Sbjct: 454 VLINH 458


>Glyma19g00740.1 
          Length = 223

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 42/105 (40%)

Query: 19  MDVERASLCNLVVNFLLEENYILTAFELLHELLDNGRNNQAIRLQQYFSDPSLFPPNQIS 78
           M+VER+S CN V                  ELLD+GR++QAIRLQ+Y             
Sbjct: 1   MEVERSSPCNCV------------------ELLDDGRHDQAIRLQEY------------- 29

Query: 79  RFNSLPLADPQTLLQQKEAAEEKLAVTDYELRLAREDIVKLKSEL 123
                 L+DPQTLLQ K  +E KL++TDY+LRLA     KLKS+L
Sbjct: 30  ------LSDPQTLLQLKNDSEHKLSITDYQLRLA-----KLKSQL 63