Miyakogusa Predicted Gene

Lj2g3v0918380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0918380.1 tr|B9N7N9|B9N7N9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584639 PE=4
SV=1,95.45,0,Translation initiation factor 2 beta, aIF2beta,
N-terminal domain,Translation initiation factor IF2/,CUFF.35752.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52940.1                                                       338   3e-93
Glyma05g09260.2                                                       337   4e-93
Glyma05g09260.1                                                       337   4e-93
Glyma02g00220.2                                                       336   7e-93
Glyma02g00220.1                                                       336   7e-93
Glyma02g10020.1                                                       334   3e-92
Glyma19g00810.1                                                       332   1e-91
Glyma19g45410.1                                                       223   9e-59
Glyma02g40310.1                                                        52   4e-07
Glyma14g38600.1                                                        51   6e-07

>Glyma18g52940.1 
          Length = 439

 Score =  338 bits (866), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 155/166 (93%), Positives = 162/166 (97%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA NSDDAFYRYKMPRMITKIEGRGNGIKTN+VNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           CELGAQSKFDEK GTSHVNGAH+TAKLA LLENFIKKYVQCYGCGNPETE++ITK+QMIQ
Sbjct: 61  CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQ 120

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKER 166
           LKCAACGFVSDVDMRDKLTTFI+KNPPE KKGSKDKKAMRRAEKER
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKER 166


>Glyma05g09260.2 
          Length = 443

 Score =  337 bits (864), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 156/166 (93%), Positives = 163/166 (98%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGAGNSDDAFYRYKMP+MITKIEGRGNGIKTNIVNMVDIAKALARP +YTTKYFG
Sbjct: 1   MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPPSYTTKYFG 60

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           CELGAQSKFDEK GTSHVNGAH+TAKLAALLE FIKKYVQCYGCGNPETE+LITK+QMIQ
Sbjct: 61  CELGAQSKFDEKVGTSHVNGAHDTAKLAALLEIFIKKYVQCYGCGNPETEILITKNQMIQ 120

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKER 166
           LKCAACGFVSDVDMRDKLT+FI+KNPPETKKGSKDKKAMRRAEKER
Sbjct: 121 LKCAACGFVSDVDMRDKLTSFIIKNPPETKKGSKDKKAMRRAEKER 166


>Glyma05g09260.1 
          Length = 443

 Score =  337 bits (864), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 156/166 (93%), Positives = 163/166 (98%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGAGNSDDAFYRYKMP+MITKIEGRGNGIKTNIVNMVDIAKALARP +YTTKYFG
Sbjct: 1   MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPPSYTTKYFG 60

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           CELGAQSKFDEK GTSHVNGAH+TAKLAALLE FIKKYVQCYGCGNPETE+LITK+QMIQ
Sbjct: 61  CELGAQSKFDEKVGTSHVNGAHDTAKLAALLEIFIKKYVQCYGCGNPETEILITKNQMIQ 120

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKER 166
           LKCAACGFVSDVDMRDKLT+FI+KNPPETKKGSKDKKAMRRAEKER
Sbjct: 121 LKCAACGFVSDVDMRDKLTSFIIKNPPETKKGSKDKKAMRRAEKER 166


>Glyma02g00220.2 
          Length = 442

 Score =  336 bits (862), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 154/166 (92%), Positives = 161/166 (96%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA NSDDAFYRYKMPRMITKIEGRGNGIKTN+VNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           CELGAQSKFDEK GTSHVNGAH+T KLA LLENFIKKYVQCYGCGNPETE++ITK+QMIQ
Sbjct: 61  CELGAQSKFDEKTGTSHVNGAHDTVKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQ 120

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKER 166
           LKCAACGFVSDVDMRDKLTTFI+KNPPE KKGSKDKKAMRRAEKER
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKER 166


>Glyma02g00220.1 
          Length = 442

 Score =  336 bits (862), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 154/166 (92%), Positives = 161/166 (96%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA NSDDAFYRYKMPRMITKIEGRGNGIKTN+VNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           CELGAQSKFDEK GTSHVNGAH+T KLA LLENFIKKYVQCYGCGNPETE++ITK+QMIQ
Sbjct: 61  CELGAQSKFDEKTGTSHVNGAHDTVKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQ 120

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKER 166
           LKCAACGFVSDVDMRDKLTTFI+KNPPE KKGSKDKKAMRRAEKER
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKER 166


>Glyma02g10020.1 
          Length = 441

 Score =  334 bits (856), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 153/166 (92%), Positives = 161/166 (96%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA NSDDAFYRYKMP+MITKIEGRGNGIKTN+VNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           CELGAQSKFDEK GTSHVNGAH+T KLA LLENFIKKYVQCYGCGNPETE++ITK+QMIQ
Sbjct: 61  CELGAQSKFDEKTGTSHVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQ 120

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKER 166
           LKCAACGFVSDVDMRDKLTTFI+KNPPE KKGSKDKKAMRRAEKER
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKER 166


>Glyma19g00810.1 
          Length = 444

 Score =  332 bits (851), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 153/166 (92%), Positives = 161/166 (96%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGAGNSDDAFYRYKMP+MITKIEGRGNGIKTNIVNMVDIAKALARP +YTTKYFG
Sbjct: 1   MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPPSYTTKYFG 60

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           CELGAQSKFDEK GTSHVNG+H+T KLA LLE FIKKYVQCYGCGNPETE+LITK+QMIQ
Sbjct: 61  CELGAQSKFDEKVGTSHVNGSHDTPKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQ 120

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKER 166
           LKCAACGFVSDVDMRDKLT+FI+KNPPETKKGSKDKKAMRRAEKER
Sbjct: 121 LKCAACGFVSDVDMRDKLTSFIIKNPPETKKGSKDKKAMRRAEKER 166


>Glyma19g45410.1 
          Length = 403

 Score =  223 bits (568), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 115/165 (69%), Positives = 120/165 (72%), Gaps = 39/165 (23%)

Query: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA NSDDAFYRYKMPRMITKIEGRGNGIKTN+VNMVDI KA             
Sbjct: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIGKA------------- 47

Query: 61  CELGAQSKFDEKNGTSHVNGAHETAKLAALLENFIKKYVQCYGCGNPETEVLITKSQMIQ 120
           C     SKFDEK GTSHVNGAH+T KLA LLENFIKKYVQCYGCGNPETE++ITK+QMIQ
Sbjct: 48  C-----SKFDEKTGTSHVNGAHDTVKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQ 102

Query: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKE 165
           LKCAAC                     E KKGSKDKKAMRRAEKE
Sbjct: 103 LKCAAC---------------------EVKKGSKDKKAMRRAEKE 126


>Glyma02g40310.1 
          Length = 268

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 35  KTNIVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKNGTSHVNGAHETAKLAALLENF 94
           KT  VN +D+ K + R   +   +   ELG     D +     V G         +L  +
Sbjct: 155 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 213

Query: 95  IKKYVQCYGCGNPETEVLITKSQMIQLKCAACG 127
           + +YV C GC +P+T +L  ++++  L+C  CG
Sbjct: 214 VNEYVICLGCKSPDT-ILTKENRLFFLRCEKCG 245


>Glyma14g38600.1 
          Length = 268

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 35  KTNIVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKNGTSHVNGAHETAKLAALLENF 94
           KT  VN +D+ K + R   +   +   ELG     D +     V G         +L  +
Sbjct: 155 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 213

Query: 95  IKKYVQCYGCGNPETEVLITKSQMIQLKCAACG 127
           + +YV C GC +P+T +L  ++++  L+C  CG
Sbjct: 214 VNEYVICLGCKSPDT-ILSKENRLFFLRCEKCG 245