Miyakogusa Predicted Gene
- Lj2g3v0917310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0917310.1 Non Chatacterized Hit- tr|I3SHH6|I3SHH6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,Ribosomal_L22,Ribosomal protein L22/L17; no
description,Ribosomal protein L22/L17; seg,NULL; CHLOROP,CUFF.35741.1
(157 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g09270.1 185 2e-47
Glyma19g00820.1 172 1e-43
Glyma09g40030.1 48 3e-06
Glyma18g46170.1 48 4e-06
>Glyma05g09270.1
Length = 209
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 117/171 (68%), Gaps = 19/171 (11%)
Query: 1 MAVSFAVNRXXXXXXXXXXXXXX-------XFPSRS-----FAIRCSSSPFTDKTLISLQ 48
MAVS AVNR +P +S IRCSSSPF DKTLIS+
Sbjct: 1 MAVSLAVNRPLLGLHENVPLAVAHPQFLPFKWPPKSKLPSVVGIRCSSSPFNDKTLISIT 60
Query: 49 PTTVSNPNNPFVC--HARRARAPFGGQETNQQYVEAYAVGRHIRTSADKARRVIDQIRGR 106
P T NP C HA + FG QE+N+ YVEAYAVGR+IR SA+KARRVIDQIRGR
Sbjct: 61 PNTSHLNPNPLACRFHASQ----FGEQESNK-YVEAYAVGRNIRMSANKARRVIDQIRGR 115
Query: 107 PYEETLMILELMPYRACEPILKIVFSAGANASNNLGLSKSSLVISKAEVNE 157
Y+ETLM+LELMPYRACE ILKIVFSAGANASNNLGLSK SLVISKAEVNE
Sbjct: 116 KYDETLMVLELMPYRACEAILKIVFSAGANASNNLGLSKGSLVISKAEVNE 166
>Glyma19g00820.1
Length = 198
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 103/133 (77%), Gaps = 5/133 (3%)
Query: 25 FPSRSFAIRCSSSPFTDKTLISLQPTTVSNPNNPFVCHARRARAPFGGQETNQQYVEAYA 84
F S IRCS PF DKTLIS++P T ++ C R A F QE+N+ YVEAYA
Sbjct: 28 FKFTSVGIRCS--PFNDKTLISIKPNTSHLNHDTLAC--RFHAAQFAEQESNK-YVEAYA 82
Query: 85 VGRHIRTSADKARRVIDQIRGRPYEETLMILELMPYRACEPILKIVFSAGANASNNLGLS 144
VGR+IR SA+KARRVIDQIRG Y+ETLM+LELMPYRACE ILKIVFSAGANASNNLGLS
Sbjct: 83 VGRNIRMSANKARRVIDQIRGSKYDETLMVLELMPYRACEAILKIVFSAGANASNNLGLS 142
Query: 145 KSSLVISKAEVNE 157
K SLVISKAEVNE
Sbjct: 143 KGSLVISKAEVNE 155
>Glyma09g40030.1
Length = 266
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 72 GQETNQQYV----EAYAVGRHIRTSADKARRVIDQIRGRPYEETLMILELMPYRACEPIL 127
G++ Q+ V + AV + I+ S K V +RG ++ LM LEL RA + +
Sbjct: 82 GEDQKQKVVTKQEKVQAVLKAIKQSPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVY 141
Query: 128 KIVFSAGANASNNLGLSKSSLVISKAEVNE 157
+++ SA ANAS+N GL L++++A V +
Sbjct: 142 QVIHSARANASHNHGLDPERLIVAEAFVGK 171
>Glyma18g46170.1
Length = 277
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 72 GQETNQQYV----EAYAVGRHIRTSADKARRVIDQIRGRPYEETLMILELMPYRACEPIL 127
G++ Q+ V + A+ + I+ S K V +RG ++ LM LEL RA + +
Sbjct: 102 GEDQKQKVVTKPEKVQAILKAIKQSPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVY 161
Query: 128 KIVFSAGANASNNLGLSKSSLVISKAEVNE 157
+++ SA ANAS+N GL L++++A V +
Sbjct: 162 QVIHSARANASHNHGLDPERLIVAEAFVGK 191